RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 A0A1W2PRG0 241 aa22.31■■□□□ 1.16
CDH11-206ENST00000562998 MINDY4BA8MYZ0 360 aa22.31■■□□□ 1.16
CDH11-206ENST00000562998 RASA1P20936 1047 aa22.31■■□□□ 1.16
CDH11-206ENST00000562998 ERO1AQ96HE7 468 aa22.31■■□□□ 1.16
CDH11-206ENST00000562998 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.31■■□□□ 1.16
CDH11-206ENST00000562998 NAPBQ9H115 298 aa22.31■■□□□ 1.16
CDH11-206ENST00000562998 CCDC171Q6TFL3 1326 aa22.31■■□□□ 1.16
CDH11-206ENST00000562998 USP17L2Q6R6M4 530 aa22.3■■□□□ 1.16
CDH11-206ENST00000562998 CD99L2Q8TCZ2 262 aa22.3■■□□□ 1.16
CDH11-206ENST00000562998 CPA4Q9UI42 421 aa22.3■■□□□ 1.16
CDH11-206ENST00000562998 ZMYM6O95789 1325 aa22.3■■□□□ 1.16
CDH11-206ENST00000562998 HTTP42858 3142 aa22.29■■□□□ 1.16
CDH11-206ENST00000562998 HIP1O00291 1037 aa22.29■■□□□ 1.16
CDH11-206ENST00000562998 MPHOSPH10O00566 681 aaKnown RBP22.29■■□□□ 1.16
CDH11-206ENST00000562998 HSPD1P10809 573 aaKnown RBP22.29■■□□□ 1.16
CDH11-206ENST00000562998 PPARAQ07869 468 aa22.29■■□□□ 1.16
CDH11-206ENST00000562998 PKN2Q16513 984 aaKnown RBP22.29■■□□□ 1.16
CDH11-206ENST00000562998 ASCC2Q9H1I8 757 aaPredicted RBP22.29■■□□□ 1.16
CDH11-206ENST00000562998 TMOD4Q9NZQ9 345 aa22.29■■□□□ 1.16
CDH11-206ENST00000562998 ANAPC4Q9UJX5 808 aa22.29■■□□□ 1.16
CDH11-206ENST00000562998 FGAP02671 866 aa22.28■■□□□ 1.16
CDH11-206ENST00000562998 LACTBP83111 547 aaPredicted RBP22.28■■□□□ 1.16
CDH11-206ENST00000562998 PABPC4Q13310 644 aaKnown RBP eCLIP22.28■■□□□ 1.16
CDH11-206ENST00000562998 OTOP1Q7RTM1 612 aa22.28■■□□□ 1.16
CDH11-206ENST00000562998 PNMA3Q9UL41 463 aa22.28■■□□□ 1.16
CDH11-206ENST00000562998 ZSWIM8A7E2V4 1837 aa22.27■■□□□ 1.16
CDH11-206ENST00000562998 CTGFP29279 349 aa22.27■■□□□ 1.16
CDH11-206ENST00000562998 USP14P54578 494 aa22.27■■□□□ 1.16
CDH11-206ENST00000562998 IFFO2Q5TF58 517 aa22.27■■□□□ 1.16
CDH11-206ENST00000562998 CWC27Q6UX04 472 aaKnown RBP22.27■■□□□ 1.16
CDH11-206ENST00000562998 ABHD8Q96I13 439 aa22.27■■□□□ 1.16
CDH11-206ENST00000562998 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.27■■□□□ 1.16
CDH11-206ENST00000562998 TMX2Q9Y320 296 aa22.27■■□□□ 1.16
CDH11-206ENST00000562998 IGKV6D-41A0A0C4DH26 115 aa22.26■■□□□ 1.15
CDH11-206ENST00000562998 FGRP09769 529 aa22.26■■□□□ 1.15
CDH11-206ENST00000562998 CLEC10AQ8IUN9 316 aa22.26■■□□□ 1.15
CDH11-206ENST00000562998 FEZ1Q99689 392 aa22.26■■□□□ 1.15
CDH11-206ENST00000562998 IL25Q9H293 177 aa22.26■■□□□ 1.15
CDH11-206ENST00000562998 KANSL2Q9H9L4 492 aa22.26■■□□□ 1.15
CDH11-206ENST00000562998 DIAPH3Q9NSV4 1193 aa22.26■■□□□ 1.15
CDH11-206ENST00000562998 TACC3Q9Y6A5 838 aa22.26■■□□□ 1.15
CDH11-206ENST00000562998 VCAM1P19320 739 aa22.25■■□□□ 1.15
CDH11-206ENST00000562998 OSBPP22059 807 aa22.25■■□□□ 1.15
CDH11-206ENST00000562998 MFAP1P55081 439 aaKnown RBP22.25■■□□□ 1.15
CDH11-206ENST00000562998 ICA1Q05084 483 aa22.25■■□□□ 1.15
CDH11-206ENST00000562998 ARHGAP39Q9C0H5 1083 aa22.25■■□□□ 1.15
CDH11-206ENST00000562998 MKNK2Q9HBH9 465 aa22.25■■□□□ 1.15
CDH11-206ENST00000562998 ZNF287Q9HBT7 754 aa22.25■■□□□ 1.15
CDH11-206ENST00000562998 TRIM17Q9Y577 477 aa22.25■■□□□ 1.15
CDH11-206ENST00000562998 PLIN4Q96Q06 1357 aa22.25■■□□□ 1.15
CDH11-206ENST00000562998 GCLCP48506 637 aaPredicted RBP22.24■■□□□ 1.15
CDH11-206ENST00000562998 ZYXQ15942 572 aaKnown RBP22.24■■□□□ 1.15
CDH11-206ENST00000562998 KIAA1755Q5JYT7 1200 aa22.24■■□□□ 1.15
CDH11-206ENST00000562998 FBXO46Q6PJ61 603 aaPredicted RBP22.24■■□□□ 1.15
CDH11-206ENST00000562998 POTEEQ6S8J3 1075 aa22.24■■□□□ 1.15
CDH11-206ENST00000562998 STK11IPQ8N1F8 1099 aa22.24■■□□□ 1.15
CDH11-206ENST00000562998 SMCR8Q8TEV9 937 aaPredicted RBP22.24■■□□□ 1.15
CDH11-206ENST00000562998 EFCC1Q9HA90 598 aa22.24■■□□□ 1.15
CDH11-206ENST00000562998 PRDM1O75626 825 aa22.23■■□□□ 1.15
CDH11-206ENST00000562998 EEF2P13639 858 aaKnown RBP22.23■■□□□ 1.15
CDH11-206ENST00000562998 CHMLP26374 656 aa22.23■■□□□ 1.15
CDH11-206ENST00000562998 PDE4BQ07343 736 aa22.23■■□□□ 1.15
CDH11-206ENST00000562998 FAM110CQ1W6H9 321 aa22.23■■□□□ 1.15
CDH11-206ENST00000562998 CATSPERGQ6ZRH7 1159 aa22.23■■□□□ 1.15
CDH11-206ENST00000562998 P2RX7Q99572 595 aaKnown RBP22.23■■□□□ 1.15
CDH11-206ENST00000562998 ARHGEF10LQ9HCE6 1279 aa22.23■■□□□ 1.15
CDH11-206ENST00000562998 MORF4L1Q9UBU8 362 aa22.23■■□□□ 1.15
CDH11-206ENST00000562998 RLFQ13129 1914 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 USP17L15C9J2P7 530 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 USP17L13C9JLJ4 530 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 USP17L11C9JVI0 530 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 USP17L18D6R9N7 530 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 USP17L22D6RA61 530 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 USP17L17D6RBQ6 530 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 USP17L19D6RCP7 530 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 USP17L20D6RJB6 530 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 GNRH1P01148 92 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 CENPBP07199 599 aaPredicted RBP22.22■■□□□ 1.15
CDH11-206ENST00000562998 SLC3A2P08195 630 aaKnown RBP22.22■■□□□ 1.15
CDH11-206ENST00000562998 CTDSPL2Q05D32 466 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 USP17L24Q0WX57 530 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 SKAP1Q86WV1 359 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 ZNF444Q8N0Y2 327 aaPredicted RBP22.22■■□□□ 1.15
CDH11-206ENST00000562998 NEDD1Q8NHV4 660 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 CCDC136Q96JN2 1154 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 TRIM47Q96LD4 638 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 DSCC1Q9BVC3 393 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 VCPKMTQ9H867 229 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 NYAP2Q9P242 653 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 PTPN22Q9Y2R2 807 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 MGAMO43451 1857 aa22.22■■□□□ 1.15
CDH11-206ENST00000562998 ORC4O43929 436 aa22.21■■□□□ 1.15
CDH11-206ENST00000562998 HERVK_113P62684 666 aa22.21■■□□□ 1.15
CDH11-206ENST00000562998 IRX3P78415 501 aaPredicted RBP22.21■■□□□ 1.15
CDH11-206ENST00000562998 ARHGEF6Q15052 776 aa22.21■■□□□ 1.15
CDH11-206ENST00000562998 ANKRD13CQ8N6S4 541 aa22.21■■□□□ 1.15
CDH11-206ENST00000562998 LPAR1Q92633 364 aa22.21■■□□□ 1.15
CDH11-206ENST00000562998 NBPF3Q9H094 633 aa22.21■■□□□ 1.15
CDH11-206ENST00000562998 SH2D4AQ9H788 454 aa22.21■■□□□ 1.15
CDH11-206ENST00000562998 INCENPQ9NQS7 918 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 277.7 ms