RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CLIP2Q9UDT6 1046 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 MROH7-TTC4A0A0A0MT08 1334 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 IFNAR1P17181 557 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 PABPC4Q13310 644 aaKnown RBP eCLIP8.55□□□□□ -1.04
TCF4-216ENST00000562680 SUPT20HL1Q3ZLR7 823 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 ARHGAP27Q6ZUM4 889 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 CEP120Q8N960 986 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 DBNDD1Q9H9R9 158 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 CSADQ9Y600 493 aa8.55□□□□□ -1.04
TCF4-216ENST00000562680 PPFIA3O75145 1194 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 ABCB5Q2M3G0 1257 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 FAM47AQ5JRC9 791 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 MYSM1Q5VVJ2 828 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 GIMAP7Q8NHV1 300 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 SCG2P13521 617 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 MARCKSP29966 332 aaPredicted RBP8.54□□□□□ -1.04
TCF4-216ENST00000562680 ADCK5Q3MIX3 580 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 CT47A1Q5JQC4 288 aaPredicted RBP8.54□□□□□ -1.04
TCF4-216ENST00000562680 USP37Q86T82 979 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 FAM177A1Q8N128 213 aaPredicted RBP8.54□□□□□ -1.04
TCF4-216ENST00000562680 PDCL2Q8N4E4 241 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 FBXO18Q8NFZ0 1043 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 LMO7Q8WWI1 1683 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 TTLL1O95922 423 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 MMP14P50281 582 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 DYNLL1P63167 89 aaKnown RBP8.54□□□□□ -1.04
TCF4-216ENST00000562680 LEO1Q8WVC0 666 aaPredicted RBP8.54□□□□□ -1.04
TCF4-216ENST00000562680 MTMR6Q9Y217 621 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 LTN1O94822 1766 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 TMCO5BA8MYB1 307 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 FOSP01100 380 aaPredicted RBP8.54□□□□□ -1.04
TCF4-216ENST00000562680 KLHL10Q6JEL2 608 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 UBN2Q6ZU65 1347 aa8.54□□□□□ -1.04
TCF4-216ENST00000562680 JAK2O60674 1132 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 FBXO33Q7Z6M2 555 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 SULF1Q8IWU6 871 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 PDS5AQ29RF7 1337 aaKnown RBP8.53□□□□□ -1.04
TCF4-216ENST00000562680 PARP4Q9UKK3 1724 aaKnown RBP8.53□□□□□ -1.04
TCF4-216ENST00000562680 KLRF2D3W0D1 207 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 USP14P54578 494 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 GPSM2P81274 684 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 SAMM50Q9Y512 469 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 BICDL2A1A5D9 508 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 USP17L8P0C7I0 530 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 TRIM21P19474 475 aaKnown RBP8.53□□□□□ -1.04
TCF4-216ENST00000562680 CASP7P55210 303 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 GPR162Q16538 588 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 NOSTRINQ8IVI9 506 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 TBC1D16Q8TBP0 767 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 FBXO41Q8TF61 875 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 MRPL11Q9Y3B7 192 aaKnown RBP8.53□□□□□ -1.04
TCF4-216ENST00000562680 MCM7P33993 719 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 SLFN13Q68D06 897 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 CCDC91Q7Z6B0 441 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 PHKBQ93100 1093 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 DCPSQ96C86 337 aaKnown RBP8.53□□□□□ -1.04
TCF4-216ENST00000562680 KAZALD1Q96I82 304 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 MYL10Q9BUA6 226 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 FMNL1O95466 1100 aaPredicted RBP8.53□□□□□ -1.04
TCF4-216ENST00000562680 GYS1P13807 737 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 NAP1L1P55209 391 aaKnown RBP8.53□□□□□ -1.04
TCF4-216ENST00000562680 VPS36Q86VN1 386 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 SPC24Q8NBT2 197 aa8.53□□□□□ -1.04
TCF4-216ENST00000562680 ORC4O43929 436 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 LETM2Q2VYF4 491 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 STRIP1Q5VSL9 837 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 BLIDQ8IZY5 108 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 CSRNP1Q96S65 589 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 FOXP1Q9H334 677 aaPredicted RBP8.52□□□□□ -1.05
TCF4-216ENST00000562680 C21orf2O43822 256 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 ECE2O60344 883 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 ASIC1P78348 528 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 PIK3AP1Q6ZUJ8 805 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 CDC37L1Q7L3B6 337 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 FILIP1Q7Z7B0 1213 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 NSUN7Q8NE18 718 aaKnown RBP8.52□□□□□ -1.05
TCF4-216ENST00000562680 ATF5Q9Y2D1 282 aaPredicted RBP8.52□□□□□ -1.05
TCF4-216ENST00000562680 STK36Q9NRP7 1315 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 ZSCAN12O43309 604 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 CRKP46108 304 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 SCRN1Q12765 414 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 ZSCAN30Q86W11 494 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 MCF2L2Q86YR7 1114 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 DHX58Q96C10 678 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 CLSTN2Q9H4D0 955 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 PEAK1Q9H792 1746 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 PHLPP1O60346 1717 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 MRC1P22897 1456 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 PRDX5P30044 214 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 ADD1P35611 737 aaKnown RBP8.52□□□□□ -1.05
TCF4-216ENST00000562680 MTIF2P46199 727 aaKnown RBP8.52□□□□□ -1.05
TCF4-216ENST00000562680 HDLBPQ00341 1268 aaKnown RBP8.52□□□□□ -1.05
TCF4-216ENST00000562680 TYRO3Q06418 890 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 DIXDC1Q155Q3 683 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 TMEM179Q6ZVK1 233 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 CCDC150Q8NCX0 1101 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 KCNG1Q9UIX4 513 aa8.52□□□□□ -1.05
TCF4-216ENST00000562680 LAD1O00515 517 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 PRKAB2O43741 272 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 SBK1Q52WX2 424 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms