RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 CDKAL1Q5VV42 579 aa7.61□□□□□ -1.19
SMG1-206ENST00000562668 TMC4Q7Z404 712 aa7.61□□□□□ -1.19
SMG1-206ENST00000562668 RIN3Q8TB24 985 aa7.61□□□□□ -1.19
SMG1-206ENST00000562668 TMEM40Q8WWA1 233 aa7.61□□□□□ -1.19
SMG1-206ENST00000562668 DPH2Q9BQC3 489 aaPredicted RBP7.61□□□□□ -1.19
SMG1-206ENST00000562668 CARS2Q9HA77 564 aaKnown RBP7.61□□□□□ -1.19
SMG1-206ENST00000562668 ATP13A1Q9HD20 1204 aa7.61□□□□□ -1.19
SMG1-206ENST00000562668 TJP2Q9UDY2 1190 aa7.61□□□□□ -1.19
SMG1-206ENST00000562668 CTNND2Q9UQB3 1225 aa7.61□□□□□ -1.19
SMG1-206ENST00000562668 ST14Q9Y5Y6 855 aa7.61□□□□□ -1.19
SMG1-206ENST00000562668 H3BS24 57 aa7.6□□□□□ -1.19
SMG1-206ENST00000562668 CTSHP09668 335 aa7.6□□□□□ -1.19
SMG1-206ENST00000562668 CYP7A1P22680 504 aa7.6□□□□□ -1.19
SMG1-206ENST00000562668 KIR3DL1P43629 444 aa7.6□□□□□ -1.19
SMG1-206ENST00000562668 XPCQ01831 940 aaPredicted RBP7.6□□□□□ -1.19
SMG1-206ENST00000562668 PDE4BQ07343 736 aa7.6□□□□□ -1.19
SMG1-206ENST00000562668 TAF1CQ15572 869 aaPredicted RBP7.6□□□□□ -1.19
SMG1-206ENST00000562668 ZSWIM9Q86XI8 627 aa7.6□□□□□ -1.19
SMG1-206ENST00000562668 PHC3Q8NDX5 983 aa7.6□□□□□ -1.19
SMG1-206ENST00000562668 CRELD1Q96HD1 420 aa7.6□□□□□ -1.19
SMG1-206ENST00000562668 TMEM87BQ96K49 555 aa7.6□□□□□ -1.19
SMG1-206ENST00000562668 TLR6Q9Y2C9 796 aa7.6□□□□□ -1.19
SMG1-206ENST00000562668 CBX7O95931 251 aa7.59□□□□□ -1.19
SMG1-206ENST00000562668 JAG1P78504 1218 aa7.59□□□□□ -1.19
SMG1-206ENST00000562668 ZNF648Q5T619 568 aaPredicted RBP7.59□□□□□ -1.19
SMG1-206ENST00000562668 SLC6A19Q695T7 634 aa7.59□□□□□ -1.19
SMG1-206ENST00000562668 THAP5Q7Z6K1 395 aa7.59□□□□□ -1.19
SMG1-206ENST00000562668 FBXO33Q7Z6M2 555 aa7.59□□□□□ -1.19
SMG1-206ENST00000562668 FAM161BQ96MY7 647 aa7.59□□□□□ -1.19
SMG1-206ENST00000562668 ADAM30Q9UKF2 790 aa7.59□□□□□ -1.19
SMG1-206ENST00000562668 SYNJ2O15056 1496 aa7.59□□□□□ -1.19
SMG1-206ENST00000562668 KIF27Q86VH2 1401 aa7.59□□□□□ -1.19
SMG1-206ENST00000562668 KCNMB1Q16558 191 aa7.58□□□□□ -1.2
SMG1-206ENST00000562668 DIEXFQ68CQ4 756 aaKnown RBP7.58□□□□□ -1.2
SMG1-206ENST00000562668 USP31Q70CQ4 1352 aa7.58□□□□□ -1.2
SMG1-206ENST00000562668 CUL7Q14999 1698 aa7.57□□□□□ -1.2
SMG1-206ENST00000562668 FARP2O94887 1054 aaPredicted RBP7.57□□□□□ -1.2
SMG1-206ENST00000562668 ETV3P41162 512 aa7.57□□□□□ -1.2
SMG1-206ENST00000562668 CDH24Q86UP0 819 aa7.57□□□□□ -1.2
SMG1-206ENST00000562668 CCDC84Q86UT8 332 aaPredicted RBP7.57□□□□□ -1.2
SMG1-206ENST00000562668 JARID2Q92833 1246 aaPredicted RBP7.57□□□□□ -1.2
SMG1-206ENST00000562668 ACSF2Q96CM8 615 aaPredicted RBP7.57□□□□□ -1.2
SMG1-206ENST00000562668 ARID1BQ8NFD5 2236 aaPredicted RBP7.57□□□□□ -1.2
SMG1-206ENST00000562668 FHAD1B1AJZ9 1412 aa7.56□□□□□ -1.2
SMG1-206ENST00000562668 TNK2Q07912 1038 aa7.56□□□□□ -1.2
SMG1-206ENST00000562668 FZD5Q13467 585 aa7.56□□□□□ -1.2
SMG1-206ENST00000562668 MCATQ8IVS2 390 aaKnown RBP7.56□□□□□ -1.2
SMG1-206ENST00000562668 DNAJB8Q8NHS0 232 aa7.56□□□□□ -1.2
SMG1-206ENST00000562668 PIWIL2Q8TC59 973 aaKnown RBP7.56□□□□□ -1.2
SMG1-206ENST00000562668 CLASP1Q7Z460 1538 aa7.56□□□□□ -1.2
SMG1-206ENST00000562668 GRIN2AQ12879 1464 aa7.55□□□□□ -1.2
SMG1-206ENST00000562668 CEP170Q5SW79 1584 aa7.55□□□□□ -1.2
SMG1-206ENST00000562668 BPNT1O95861 308 aa7.55□□□□□ -1.2
SMG1-206ENST00000562668 AFMP43652 599 aa7.55□□□□□ -1.2
SMG1-206ENST00000562668 LMNB2Q03252 620 aa7.55□□□□□ -1.2
SMG1-206ENST00000562668 BNC2Q6ZN30 1099 aaPredicted RBP7.55□□□□□ -1.2
SMG1-206ENST00000562668 C19orf73Q9NVV2 129 aa7.55□□□□□ -1.2
SMG1-206ENST00000562668 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.55□□□□□ -1.2
SMG1-206ENST00000562668 NUP160Q12769 1436 aa7.54□□□□□ -1.2
SMG1-206ENST00000562668 ZNF503-AS2A6NEH8 195 aa7.54□□□□□ -1.2
SMG1-206ENST00000562668 F6X3S4 739 aa7.54□□□□□ -1.2
SMG1-206ENST00000562668 SORBS3O60504 671 aa7.54□□□□□ -1.2
SMG1-206ENST00000562668 CILPO75339 1184 aa7.54□□□□□ -1.2
SMG1-206ENST00000562668 CYB5D2Q8WUJ1 264 aa7.54□□□□□ -1.2
SMG1-206ENST00000562668 UBE2FQ969M7 185 aa7.54□□□□□ -1.2
SMG1-206ENST00000562668 CCDC120Q96HB5 630 aa7.54□□□□□ -1.2
SMG1-206ENST00000562668 RHOVQ96L33 236 aa7.54□□□□□ -1.2
SMG1-206ENST00000562668 ALPK1Q96QP1 1244 aa7.54□□□□□ -1.2
SMG1-206ENST00000562668 MRS2Q9HD23 443 aa7.54□□□□□ -1.2
SMG1-206ENST00000562668 ZSWIM5Q9P217 1185 aa7.54□□□□□ -1.2
SMG1-206ENST00000562668 VTI1BQ9UEU0 232 aa7.54□□□□□ -1.2
SMG1-206ENST00000562668 CORINQ9Y5Q5 1042 aa7.54□□□□□ -1.2
SMG1-206ENST00000562668 KRTAP4-8A0A0G2JLE6 195 aa7.53□□□□□ -1.2
SMG1-206ENST00000562668 LRRC10BA6NIK2 292 aa7.53□□□□□ -1.2
SMG1-206ENST00000562668 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.53□□□□□ -1.2
SMG1-206ENST00000562668 RBAK-RBAKDNI3L0D1 243 aa7.53□□□□□ -1.2
SMG1-206ENST00000562668 PLCG1P19174 1290 aa7.53□□□□□ -1.2
SMG1-206ENST00000562668 GDNFP39905 211 aa7.53□□□□□ -1.2
SMG1-206ENST00000562668 CAMK2GQ13555 558 aaPredicted RBP7.53□□□□□ -1.2
SMG1-206ENST00000562668 FYB2Q5VWT5 728 aa7.53□□□□□ -1.2
SMG1-206ENST00000562668 TMPRSS7Q7RTY8 843 aa7.53□□□□□ -1.2
SMG1-206ENST00000562668 KSR1Q8IVT5 923 aa7.53□□□□□ -1.2
SMG1-206ENST00000562668 FAM13CQ8NE31 585 aa7.53□□□□□ -1.2
SMG1-206ENST00000562668 GATAD2BQ8WXI9 593 aa7.53□□□□□ -1.2
SMG1-206ENST00000562668 KIRREL1Q96J84 757 aa7.53□□□□□ -1.2
SMG1-206ENST00000562668 FAM53CQ9NYF3 392 aa7.53□□□□□ -1.2
SMG1-206ENST00000562668 PRXQ9BXM0 1461 aa7.53□□□□□ -1.2
SMG1-206ENST00000562668 FAM221AA4D161 298 aa7.52□□□□□ -1.21
SMG1-206ENST00000562668 F13A1P00488 732 aa7.52□□□□□ -1.21
SMG1-206ENST00000562668 PF4P02776 101 aa7.52□□□□□ -1.21
SMG1-206ENST00000562668 GLI1P08151 1106 aa7.52□□□□□ -1.21
SMG1-206ENST00000562668 ERCC3P19447 782 aa7.52□□□□□ -1.21
SMG1-206ENST00000562668 ITGAEP38570 1179 aa7.52□□□□□ -1.21
SMG1-206ENST00000562668 YARSP54577 528 aaKnown RBP7.52□□□□□ -1.21
SMG1-206ENST00000562668 ZNF124Q15973 351 aa7.52□□□□□ -1.21
SMG1-206ENST00000562668 PKN1Q16512 942 aa7.52□□□□□ -1.21
SMG1-206ENST00000562668 TMEM201Q5SNT2 666 aa7.52□□□□□ -1.21
SMG1-206ENST00000562668 PPP1R13LQ8WUF5 828 aa7.52□□□□□ -1.21
SMG1-206ENST00000562668 Q96M66 194 aa7.52□□□□□ -1.21
SMG1-206ENST00000562668 TMEM74Q96NL1 305 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms