RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 CNMDO75829 334 aa22.64■■□□□ 1.21
KATNB1-202ENST00000562542 USP17L24Q0WX57 530 aa22.64■■□□□ 1.21
KATNB1-202ENST00000562542 NAA16Q6N069 864 aaPredicted RBP22.64■■□□□ 1.21
KATNB1-202ENST00000562542 SLC39A5Q6ZMH5 540 aa22.64■■□□□ 1.21
KATNB1-202ENST00000562542 SAP30BPQ9UHR5 308 aaKnown RBP22.64■■□□□ 1.21
KATNB1-202ENST00000562542 SIPA1L1O43166 1804 aa22.64■■□□□ 1.21
KATNB1-202ENST00000562542 SRGAP3O43295 1099 aa22.63■■□□□ 1.21
KATNB1-202ENST00000562542 ANP32CO43423 234 aa22.63■■□□□ 1.21
KATNB1-202ENST00000562542 HLA-DOAP06340 250 aa22.63■■□□□ 1.21
KATNB1-202ENST00000562542 TRIM60Q495X7 471 aa22.63■■□□□ 1.21
KATNB1-202ENST00000562542 NPLOC4Q8TAT6 608 aa22.63■■□□□ 1.21
KATNB1-202ENST00000562542 GH2P01242 217 aa22.62■■□□□ 1.21
KATNB1-202ENST00000562542 COL9A1P20849 921 aa22.62■■□□□ 1.21
KATNB1-202ENST00000562542 ARID4AP29374 1257 aaPredicted RBP22.62■■□□□ 1.21
KATNB1-202ENST00000562542 ALDH1L2Q3SY69 923 aa22.62■■□□□ 1.21
KATNB1-202ENST00000562542 ANO1Q5XXA6 986 aa22.62■■□□□ 1.21
KATNB1-202ENST00000562542 ATF7IPQ6VMQ6 1270 aa22.62■■□□□ 1.21
KATNB1-202ENST00000562542 METTL16Q86W50 562 aaKnown RBP22.62■■□□□ 1.21
KATNB1-202ENST00000562542 TRPV1Q8NER1 839 aa22.62■■□□□ 1.21
KATNB1-202ENST00000562542 ZNF521Q96K83 1311 aa22.61■■□□□ 1.21
KATNB1-202ENST00000562542 HOXC6P09630 235 aa22.61■■□□□ 1.21
KATNB1-202ENST00000562542 MCAMP43121 646 aa22.61■■□□□ 1.21
KATNB1-202ENST00000562542 GRB14Q14449 540 aa22.61■■□□□ 1.21
KATNB1-202ENST00000562542 DPP9Q86TI2 863 aa22.61■■□□□ 1.21
KATNB1-202ENST00000562542 MEIS3Q99687 375 aa22.61■■□□□ 1.21
KATNB1-202ENST00000562542 TTC28Q96AY4 2481 aa22.6■■□□□ 1.21
KATNB1-202ENST00000562542 E9PSI1 815 aa22.6■■□□□ 1.21
KATNB1-202ENST00000562542 UQCRFS1P1P0C7P4 283 aa22.6■■□□□ 1.21
KATNB1-202ENST00000562542 CYBAP13498 195 aa22.6■■□□□ 1.21
KATNB1-202ENST00000562542 TJAP1Q5JTD0 557 aa22.6■■□□□ 1.21
KATNB1-202ENST00000562542 C12orf42Q96LP6 360 aa22.6■■□□□ 1.21
KATNB1-202ENST00000562542 RNPC3Q96LT9 517 aaKnown RBP22.6■■□□□ 1.21
KATNB1-202ENST00000562542 PDLIM7Q9NR12 457 aa22.6■■□□□ 1.21
KATNB1-202ENST00000562542 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.6■■□□□ 1.21
KATNB1-202ENST00000562542 RAB3GAP1Q15042 981 aa22.59■■□□□ 1.21
KATNB1-202ENST00000562542 CATSPERGQ6ZRH7 1159 aa22.59■■□□□ 1.21
KATNB1-202ENST00000562542 SH3RF1Q7Z6J0 888 aa22.59■■□□□ 1.21
KATNB1-202ENST00000562542 SNRKQ9NRH2 765 aa22.59■■□□□ 1.21
KATNB1-202ENST00000562542 BTBD7Q9P203 1132 aa22.59■■□□□ 1.21
KATNB1-202ENST00000562542 TNFRSF10AO00220 468 aa22.58■■□□□ 1.21
KATNB1-202ENST00000562542 VCAM1P19320 739 aa22.58■■□□□ 1.21
KATNB1-202ENST00000562542 ADCYAP1R1P41586 468 aa22.58■■□□□ 1.21
KATNB1-202ENST00000562542 USP14P54578 494 aa22.58■■□□□ 1.21
KATNB1-202ENST00000562542 FERMT2Q96AC1 680 aa22.58■■□□□ 1.21
KATNB1-202ENST00000562542 NOB1Q9ULX3 412 aaKnown RBP22.58■■□□□ 1.21
KATNB1-202ENST00000562542 CDH23Q9H251 3354 aa22.57■■□□□ 1.2
KATNB1-202ENST00000562542 TMEM265A0A087WTH1 108 aa22.57■■□□□ 1.2
KATNB1-202ENST00000562542 TRIM43BA6NCK2 446 aa22.57■■□□□ 1.2
KATNB1-202ENST00000562542 PPP4CP60510 307 aa22.57■■□□□ 1.2
KATNB1-202ENST00000562542 TRIM43Q96BQ3 446 aaPredicted RBP22.57■■□□□ 1.2
KATNB1-202ENST00000562542 API5Q9BZZ5 524 aaKnown RBP22.57■■□□□ 1.2
KATNB1-202ENST00000562542 RLFQ13129 1914 aa22.57■■□□□ 1.2
KATNB1-202ENST00000562542 ADORA2AP29274 412 aa22.56■■□□□ 1.2
KATNB1-202ENST00000562542 SNX17Q15036 470 aa22.56■■□□□ 1.2
KATNB1-202ENST00000562542 ADGRA1Q86SQ6 560 aa22.56■■□□□ 1.2
KATNB1-202ENST00000562542 RPAP3Q9H6T3 665 aaPredicted RBP22.56■■□□□ 1.2
KATNB1-202ENST00000562542 SPDYE16A6NNV3 312 aaPredicted RBP22.55■■□□□ 1.2
KATNB1-202ENST00000562542 SEPT4O43236 478 aa22.55■■□□□ 1.2
KATNB1-202ENST00000562542 TTC39AQ5SRH9 613 aa22.55■■□□□ 1.2
KATNB1-202ENST00000562542 OLFML2BQ68BL8 750 aa22.55■■□□□ 1.2
KATNB1-202ENST00000562542 LBX2Q6XYB7 198 aa22.55■■□□□ 1.2
KATNB1-202ENST00000562542 KIAA1683Q9H0B3 1180 aa22.55■■□□□ 1.2
KATNB1-202ENST00000562542 TLE2Q04725 743 aa22.54■■□□□ 1.2
KATNB1-202ENST00000562542 GRIN2CQ14957 1233 aa22.54■■□□□ 1.2
KATNB1-202ENST00000562542 USP38Q8NB14 1042 aa22.54■■□□□ 1.2
KATNB1-202ENST00000562542 ACER1Q8TDN7 264 aa22.54■■□□□ 1.2
KATNB1-202ENST00000562542 GNAI3P08754 354 aa22.53■■□□□ 1.2
KATNB1-202ENST00000562542 USP5P45974 858 aa22.53■■□□□ 1.2
KATNB1-202ENST00000562542 G3BP1Q13283 466 aaKnown RBP eCLIP22.53■■□□□ 1.2
KATNB1-202ENST00000562542 LRRC41Q15345 812 aa22.53■■□□□ 1.2
KATNB1-202ENST00000562542 ABCB5Q2M3G0 1257 aa22.53■■□□□ 1.2
KATNB1-202ENST00000562542 SLC5A4Q9NY91 659 aa22.53■■□□□ 1.2
KATNB1-202ENST00000562542 TACC3Q9Y6A5 838 aa22.53■■□□□ 1.2
KATNB1-202ENST00000562542 STRNO43815 780 aa22.52■■□□□ 1.2
KATNB1-202ENST00000562542 CLTBP09497 229 aa22.52■■□□□ 1.2
KATNB1-202ENST00000562542 RAG1P15918 1043 aa22.52■■□□□ 1.2
KATNB1-202ENST00000562542 DYNLL1P63167 89 aaKnown RBP22.52■■□□□ 1.2
KATNB1-202ENST00000562542 CERKLQ49MI3 558 aaPredicted RBP22.52■■□□□ 1.2
KATNB1-202ENST00000562542 PRAMEF19Q5SWL8 479 aa22.52■■□□□ 1.2
KATNB1-202ENST00000562542 MOV10L1Q9BXT6 1211 aaKnown RBP22.52■■□□□ 1.2
KATNB1-202ENST00000562542 CABP5Q9NP86 173 aa22.52■■□□□ 1.2
KATNB1-202ENST00000562542 RAPGEFL1Q9UHV5 662 aa22.52■■□□□ 1.2
KATNB1-202ENST00000562542 SERPINB13Q9UIV8 391 aa22.52■■□□□ 1.2
KATNB1-202ENST00000562542 CDK5RAP2Q96SN8 1893 aa22.51■■□□□ 1.19
KATNB1-202ENST00000562542 IGHA2P01877 340 aa22.51■■□□□ 1.19
KATNB1-202ENST00000562542 DNAJB2P25686 324 aa22.51■■□□□ 1.19
KATNB1-202ENST00000562542 ITGB8P26012 769 aa22.51■■□□□ 1.19
KATNB1-202ENST00000562542 EPHB4P54760 987 aa22.51■■□□□ 1.19
KATNB1-202ENST00000562542 SLFN5Q08AF3 891 aa22.51■■□□□ 1.19
KATNB1-202ENST00000562542 MTX1Q13505 466 aa22.51■■□□□ 1.19
KATNB1-202ENST00000562542 FAM47AQ5JRC9 791 aa22.51■■□□□ 1.19
KATNB1-202ENST00000562542 CCDC158Q5M9N0 1113 aa22.51■■□□□ 1.19
KATNB1-202ENST00000562542 C1orf53Q5VUE5 145 aa22.51■■□□□ 1.19
KATNB1-202ENST00000562542 TATDN1Q6P1N9 297 aa22.51■■□□□ 1.19
KATNB1-202ENST00000562542 PPM1EQ8WY54 764 aa22.51■■□□□ 1.19
KATNB1-202ENST00000562542 FOCADQ5VW36 1801 aa22.51■■□□□ 1.19
KATNB1-202ENST00000562542 PQBP1O60828 265 aaKnown RBP22.5■■□□□ 1.19
KATNB1-202ENST00000562542 CYP2E1P05181 493 aaPredicted RBP22.5■■□□□ 1.19
KATNB1-202ENST00000562542 CYP7A1P22680 504 aa22.5■■□□□ 1.19
KATNB1-202ENST00000562542 FPGSQ05932 587 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms