RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 SHMT1P34896 483 aa11.06□□□□□ -0.64
CDH13-205ENST00000562307 GUCY1B3Q02153 619 aa11.06□□□□□ -0.64
CDH13-205ENST00000562307 KIF23Q02241 960 aaPredicted RBP11.06□□□□□ -0.64
CDH13-205ENST00000562307 GRM4Q14833 912 aa11.06□□□□□ -0.64
CDH13-205ENST00000562307 KRT40Q6A162 431 aa11.06□□□□□ -0.64
CDH13-205ENST00000562307 OTUD7BQ6GQQ9 843 aa11.06□□□□□ -0.64
CDH13-205ENST00000562307 FOXP4Q8IVH2 680 aaPredicted RBP11.06□□□□□ -0.64
CDH13-205ENST00000562307 ZFPM1Q8IX07 1006 aa11.06□□□□□ -0.64
CDH13-205ENST00000562307 PNMA1Q8ND90 353 aa11.06□□□□□ -0.64
CDH13-205ENST00000562307 CTCFLQ8NI51 663 aaPredicted RBP11.06□□□□□ -0.64
CDH13-205ENST00000562307 ZBED3Q96IU2 234 aaPredicted RBP11.06□□□□□ -0.64
CDH13-205ENST00000562307 CCDC17Q96LX7 622 aa11.06□□□□□ -0.64
CDH13-205ENST00000562307 ZNF396Q96N95 335 aaPredicted RBP11.06□□□□□ -0.64
CDH13-205ENST00000562307 AIFM3Q96NN9 605 aa11.06□□□□□ -0.64
CDH13-205ENST00000562307 TMEM47Q9BQJ4 181 aa11.06□□□□□ -0.64
CDH13-205ENST00000562307 FER1L6Q2WGJ9 1857 aa11.06□□□□□ -0.64
CDH13-205ENST00000562307 ADAMTSL1Q8N6G6 1762 aa11.05□□□□□ -0.64
CDH13-205ENST00000562307 FIBPO43427 364 aa11.05□□□□□ -0.64
CDH13-205ENST00000562307 TOP1P11387 765 aaKnown RBP11.05□□□□□ -0.64
CDH13-205ENST00000562307 U2AF2P26368 475 aaKnown RBP eCLIP11.05□□□□□ -0.64
CDH13-205ENST00000562307 GUCY1A2P33402 732 aa11.05□□□□□ -0.64
CDH13-205ENST00000562307 GNAQP50148 359 aa11.05□□□□□ -0.64
CDH13-205ENST00000562307 PKN1Q16512 942 aa11.05□□□□□ -0.64
CDH13-205ENST00000562307 FKBP1CQ5VVH2 108 aa11.05□□□□□ -0.64
CDH13-205ENST00000562307 CIAPIN1Q6FI81 312 aa11.05□□□□□ -0.64
CDH13-205ENST00000562307 SH3BP5LQ7L8J4 393 aa11.05□□□□□ -0.64
CDH13-205ENST00000562307 OGFOD1Q8N543 542 aa11.05□□□□□ -0.64
CDH13-205ENST00000562307 SRBD1Q8N5C6 995 aaKnown RBP11.05□□□□□ -0.64
CDH13-205ENST00000562307 LEO1Q8WVC0 666 aaPredicted RBP11.05□□□□□ -0.64
CDH13-205ENST00000562307 JDP2Q8WYK2 163 aa11.05□□□□□ -0.64
CDH13-205ENST00000562307 TDRD3Q9H7E2 651 aaKnown RBP11.05□□□□□ -0.64
CDH13-205ENST00000562307 GJB4Q9NTQ9 266 aa11.05□□□□□ -0.64
CDH13-205ENST00000562307 MTMR4Q9NYA4 1195 aa11.05□□□□□ -0.64
CDH13-205ENST00000562307 TFIP11Q9UBB9 837 aaKnown RBP11.05□□□□□ -0.64
CDH13-205ENST00000562307 PI4KBQ9UBF8 816 aa11.05□□□□□ -0.64
CDH13-205ENST00000562307 ECM29Q5VYK3 1845 aa11.05□□□□□ -0.64
CDH13-205ENST00000562307 PALM3A6NDB9 673 aaPredicted RBP11.04□□□□□ -0.64
CDH13-205ENST00000562307 DDTLA6NHG4 134 aaPredicted RBP11.04□□□□□ -0.64
CDH13-205ENST00000562307 PLEKHA8P1O95397 391 aa11.04□□□□□ -0.64
CDH13-205ENST00000562307 RPS12P25398 132 aaKnown RBP11.04□□□□□ -0.64
CDH13-205ENST00000562307 SMARCA1P28370 1054 aa11.04□□□□□ -0.64
CDH13-205ENST00000562307 FOSBP53539 338 aa11.04□□□□□ -0.64
CDH13-205ENST00000562307 TRIM29Q14134 588 aa11.04□□□□□ -0.64
CDH13-205ENST00000562307 TNIP1Q15025 636 aa11.04□□□□□ -0.64
CDH13-205ENST00000562307 DLGAP5Q15398 846 aa11.04□□□□□ -0.64
CDH13-205ENST00000562307 PPP4R3BQ5MIZ7 849 aa11.04□□□□□ -0.64
CDH13-205ENST00000562307 TATDN1Q6P1N9 297 aa11.04□□□□□ -0.64
CDH13-205ENST00000562307 CMTR1Q8N1G2 835 aaKnown RBP11.04□□□□□ -0.64
CDH13-205ENST00000562307 KLHL34Q8N239 644 aa11.04□□□□□ -0.64
CDH13-205ENST00000562307 SPATA32Q96LK8 384 aa11.04□□□□□ -0.64
CDH13-205ENST00000562307 LZTS2Q9BRK4 669 aa11.04□□□□□ -0.64
CDH13-205ENST00000562307 GZF1Q9H116 711 aaPredicted RBP11.04□□□□□ -0.64
CDH13-205ENST00000562307 SPON1Q9HCB6 807 aa11.04□□□□□ -0.64
CDH13-205ENST00000562307 RTEL1Q9NZ71 1219 aa11.04□□□□□ -0.64
CDH13-205ENST00000562307 RBM27Q9P2N5 1060 aaKnown RBP11.04□□□□□ -0.64
CDH13-205ENST00000562307 ZNF70Q9UC06 446 aaPredicted RBP11.04□□□□□ -0.64
CDH13-205ENST00000562307 PPP1R1BQ9UD71 204 aaPredicted RBP11.04□□□□□ -0.64
CDH13-205ENST00000562307 MAD2L2Q9UI95 211 aa11.04□□□□□ -0.64
CDH13-205ENST00000562307 ISY1Q9ULR0 285 aaKnown RBP11.04□□□□□ -0.64
CDH13-205ENST00000562307 BCS1LQ9Y276 419 aa11.04□□□□□ -0.64
CDH13-205ENST00000562307 ZBTB12Q9Y330 459 aaPredicted RBP11.04□□□□□ -0.64
CDH13-205ENST00000562307 CNTNAP5Q8WYK1 1306 aa11.04□□□□□ -0.64
CDH13-205ENST00000562307 KIF28PB7ZC32 967 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 UBE2Q2LH0YL09 131 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 FZD9O00144 591 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 MMP1P03956 469 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 AKR1B1P15121 316 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 CACNB3P54284 484 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 ZNF280AP59817 542 aaPredicted RBP11.03□□□□□ -0.64
CDH13-205ENST00000562307 ZNF445P59923 1031 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 AKAP17AQ02040 695 aaKnown RBP11.03□□□□□ -0.64
CDH13-205ENST00000562307 SPDYE2Q495Y8 402 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 MYSM1Q5VVJ2 828 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 CAVIN1Q6NZI2 390 aaKnown RBP11.03□□□□□ -0.64
CDH13-205ENST00000562307 CCDC82Q8N4S0 544 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 NLGN2Q8NFZ4 835 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 FAM151AQ8WW52 585 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 CEP95Q96GE4 821 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 USP28Q96RU2 1077 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 FOXP1Q9H334 677 aaPredicted RBP11.03□□□□□ -0.64
CDH13-205ENST00000562307 DNAJC18Q9H819 358 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 TMEM63CQ9P1W3 806 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 STX8Q9UNK0 236 aa11.03□□□□□ -0.64
CDH13-205ENST00000562307 V9GY48 417 aaPredicted RBP11.03□□□□□ -0.64
CDH13-205ENST00000562307 FSD2A1L4K1 749 aa11.02□□□□□ -0.65
CDH13-205ENST00000562307 YEATS4O95619 227 aa11.02□□□□□ -0.65
CDH13-205ENST00000562307 SNHG28P0DPA3 235 aa11.02□□□□□ -0.65
CDH13-205ENST00000562307 XBP1P17861 261 aa11.02□□□□□ -0.65
CDH13-205ENST00000562307 NASPP49321 788 aaPredicted RBP11.02□□□□□ -0.65
CDH13-205ENST00000562307 PRELPP51888 382 aa11.02□□□□□ -0.65
CDH13-205ENST00000562307 TCP10Q12799 353 aa11.02□□□□□ -0.65
CDH13-205ENST00000562307 SAFBQ15424 915 aaKnown RBP eCLIP11.02□□□□□ -0.65
CDH13-205ENST00000562307 ZSCAN23Q3MJ62 389 aa11.02□□□□□ -0.65
CDH13-205ENST00000562307 FAM83AQ86UY5 434 aa11.02□□□□□ -0.65
CDH13-205ENST00000562307 FAM177A1Q8N128 213 aaPredicted RBP11.02□□□□□ -0.65
CDH13-205ENST00000562307 DPF2Q92785 391 aa11.02□□□□□ -0.65
CDH13-205ENST00000562307 MKL1Q969V6 931 aa11.02□□□□□ -0.65
CDH13-205ENST00000562307 SHISA4Q96DD7 197 aa11.02□□□□□ -0.65
CDH13-205ENST00000562307 PGBD1Q96JS3 809 aa11.02□□□□□ -0.65
CDH13-205ENST00000562307 PHF20Q9BVI0 1012 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms