RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 IKBKEQ14164 716 aa8.04□□□□□ -1.12
UBR1-203ENST00000562173 FBXO11Q86XK2 927 aa8.04□□□□□ -1.12
UBR1-203ENST00000562173 DMRTC2Q8IXT2 367 aaPredicted RBP8.04□□□□□ -1.12
UBR1-203ENST00000562173 DDX54Q8TDD1 881 aaKnown RBP8.04□□□□□ -1.12
UBR1-203ENST00000562173 SYT17Q9BSW7 474 aa8.04□□□□□ -1.12
UBR1-203ENST00000562173 C14orf93Q9H972 538 aaKnown RBP8.04□□□□□ -1.12
UBR1-203ENST00000562173 USP17L7P0C7H9 530 aa8.03□□□□□ -1.12
UBR1-203ENST00000562173 ESRRAP11474 423 aaPredicted RBP8.03□□□□□ -1.12
UBR1-203ENST00000562173 ARL4DP49703 201 aa8.03□□□□□ -1.12
UBR1-203ENST00000562173 FCGRTP55899 365 aa8.03□□□□□ -1.12
UBR1-203ENST00000562173 MRPL58Q14197 206 aaKnown RBP8.03□□□□□ -1.12
UBR1-203ENST00000562173 SETDB1Q15047 1291 aa8.03□□□□□ -1.12
UBR1-203ENST00000562173 SPRED3Q2MJR0 410 aa8.03□□□□□ -1.12
UBR1-203ENST00000562173 MARCH10Q8NA82 808 aaPredicted RBP8.03□□□□□ -1.12
UBR1-203ENST00000562173 NLGN2Q8NFZ4 835 aa8.03□□□□□ -1.12
UBR1-203ENST00000562173 NACC1Q96RE7 527 aa8.03□□□□□ -1.12
UBR1-203ENST00000562173 SEC31BQ9NQW1 1179 aa8.03□□□□□ -1.12
UBR1-203ENST00000562173 SH2B1Q9NRF2 756 aaPredicted RBP8.03□□□□□ -1.12
UBR1-203ENST00000562173 PIK3C2AO00443 1686 aa8.02□□□□□ -1.13
UBR1-203ENST00000562173 COL5A2P05997 1499 aaPredicted RBP8.02□□□□□ -1.13
UBR1-203ENST00000562173 FSCN2O14926 492 aa8.02□□□□□ -1.13
UBR1-203ENST00000562173 C19orf57Q0VDD7 668 aa8.02□□□□□ -1.13
UBR1-203ENST00000562173 ZNF827Q17R98 1081 aa8.02□□□□□ -1.13
UBR1-203ENST00000562173 CEP44Q9C0F1 390 aa8.02□□□□□ -1.13
UBR1-203ENST00000562173 DLC1Q96QB1 1528 aa8.02□□□□□ -1.13
UBR1-203ENST00000562173 ANKARQ7Z5J8 1434 aa8.02□□□□□ -1.13
UBR1-203ENST00000562173 RGPD2P0DJD1 1756 aa8.02□□□□□ -1.13
UBR1-203ENST00000562173 LINC01387J3KSC0 135 aa8.01□□□□□ -1.13
UBR1-203ENST00000562173 DLL1O00548 723 aa8.01□□□□□ -1.13
UBR1-203ENST00000562173 DEAF1O75398 565 aaPredicted RBP8.01□□□□□ -1.13
UBR1-203ENST00000562173 ST13P50502 369 aaKnown RBP8.01□□□□□ -1.13
UBR1-203ENST00000562173 TAGLNQ01995 201 aaKnown RBP8.01□□□□□ -1.13
UBR1-203ENST00000562173 NGDNQ8NEJ9 315 aaKnown RBP8.01□□□□□ -1.13
UBR1-203ENST00000562173 ACSBG1Q96GR2 724 aa8.01□□□□□ -1.13
UBR1-203ENST00000562173 POGKQ9P215 609 aa8.01□□□□□ -1.13
UBR1-203ENST00000562173 VTI1BQ9UEU0 232 aa8.01□□□□□ -1.13
UBR1-203ENST00000562173 COL24A1Q17RW2 1714 aa8□□□□□ -1.13
UBR1-203ENST00000562173 NHSQ6T4R5 1651 aa8□□□□□ -1.13
UBR1-203ENST00000562173 FAM229AH3BQW9 127 aa8□□□□□ -1.13
UBR1-203ENST00000562173 AP3B2Q13367 1082 aa8□□□□□ -1.13
UBR1-203ENST00000562173 NBPF8Q3BBV2 869 aa8□□□□□ -1.13
UBR1-203ENST00000562173 GPRASP1Q5JY77 1395 aa7.99□□□□□ -1.13
UBR1-203ENST00000562173 TM4SF5O14894 197 aa7.99□□□□□ -1.13
UBR1-203ENST00000562173 FURINP09958 794 aa7.99□□□□□ -1.13
UBR1-203ENST00000562173 YBX3P16989 372 aaKnown RBP eCLIP7.99□□□□□ -1.13
UBR1-203ENST00000562173 EVA1CP58658 441 aa7.99□□□□□ -1.13
UBR1-203ENST00000562173 HNRNPUQ00839 825 aaKnown RBP eCLIP7.99□□□□□ -1.13
UBR1-203ENST00000562173 PPP2R3AQ06190 1150 aa7.99□□□□□ -1.13
UBR1-203ENST00000562173 HP1BP3Q5SSJ5 553 aaPredicted RBP7.99□□□□□ -1.13
UBR1-203ENST00000562173 TCP11L2Q8N4U5 519 aa7.99□□□□□ -1.13
UBR1-203ENST00000562173 FOXD4L4Q8WXT5 416 aaPredicted RBP7.99□□□□□ -1.13
UBR1-203ENST00000562173 MPHOSPH9Q99550 1183 aa7.99□□□□□ -1.13
UBR1-203ENST00000562173 ACEP12821 1306 aa7.99□□□□□ -1.13
UBR1-203ENST00000562173 DHX57Q6P158 1386 aaKnown RBP7.98□□□□□ -1.13
UBR1-203ENST00000562173 PARD3Q8TEW0 1356 aa7.98□□□□□ -1.13
UBR1-203ENST00000562173 ANKRD30BQ9BXX2 1392 aa7.98□□□□□ -1.13
UBR1-203ENST00000562173 K7ELQ4 463 aaPredicted RBP7.98□□□□□ -1.13
UBR1-203ENST00000562173 CD68P34810 354 aaPredicted RBP7.98□□□□□ -1.13
UBR1-203ENST00000562173 NRG1Q02297 640 aaPredicted RBP7.98□□□□□ -1.13
UBR1-203ENST00000562173 TXNRD1Q16881 649 aa7.98□□□□□ -1.13
UBR1-203ENST00000562173 TXNDC11Q6PKC3 985 aa7.98□□□□□ -1.13
UBR1-203ENST00000562173 IGF2-ASQ6U949 168 aa7.98□□□□□ -1.13
UBR1-203ENST00000562173 SMIM5Q71RC9 77 aa7.98□□□□□ -1.13
UBR1-203ENST00000562173 MRPL18Q9H0U6 180 aaKnown RBP7.98□□□□□ -1.13
UBR1-203ENST00000562173 RNF19AQ9NV58 838 aa7.98□□□□□ -1.13
UBR1-203ENST00000562173 TMEM39AQ9NV64 488 aa7.98□□□□□ -1.13
UBR1-203ENST00000562173 TTF2Q9UNY4 1162 aaKnown RBP7.98□□□□□ -1.13
UBR1-203ENST00000562173 OVOS2A0A0G2JMS6 1433 aa7.97□□□□□ -1.13
UBR1-203ENST00000562173 OVOS2A0A0J9YW53 1432 aa7.97□□□□□ -1.13
UBR1-203ENST00000562173 OVOS2Q6IE36 1432 aa7.97□□□□□ -1.13
UBR1-203ENST00000562173 SOX1O00570 391 aaPredicted RBP7.97□□□□□ -1.13
UBR1-203ENST00000562173 CYP11A1P05108 521 aa7.97□□□□□ -1.13
UBR1-203ENST00000562173 ZNF423Q2M1K9 1284 aa7.97□□□□□ -1.13
UBR1-203ENST00000562173 FOXD4L6Q3SYB3 417 aaPredicted RBP7.97□□□□□ -1.13
UBR1-203ENST00000562173 FOXD4L3Q6VB84 417 aaPredicted RBP7.97□□□□□ -1.13
UBR1-203ENST00000562173 SV2BQ7L1I2 683 aa7.97□□□□□ -1.13
UBR1-203ENST00000562173 GALNT11Q8NCW6 608 aa7.97□□□□□ -1.13
UBR1-203ENST00000562173 ZNF526Q8TF50 670 aaPredicted RBP7.97□□□□□ -1.13
UBR1-203ENST00000562173 SLC7A3Q8WY07 619 aa7.97□□□□□ -1.13
UBR1-203ENST00000562173 FAM161BQ96MY7 647 aa7.97□□□□□ -1.13
UBR1-203ENST00000562173 CARD10Q9BWT7 1032 aa7.97□□□□□ -1.13
UBR1-203ENST00000562173 NRSN2Q9GZP1 204 aa7.97□□□□□ -1.13
UBR1-203ENST00000562173 GPN3Q9UHW5 284 aaPredicted RBP7.97□□□□□ -1.13
UBR1-203ENST00000562173 AKAP2Q9Y2D5 859 aa7.97□□□□□ -1.13
UBR1-203ENST00000562173 USP19O94966 1318 aa7.97□□□□□ -1.13
UBR1-203ENST00000562173 DOT1LQ8TEK3 1739 aa7.96□□□□□ -1.14
UBR1-203ENST00000562173 C9orf172C9J069 976 aa7.96□□□□□ -1.14
UBR1-203ENST00000562173 CTSHP09668 335 aa7.96□□□□□ -1.14
UBR1-203ENST00000562173 FAAP100Q0VG06 881 aa7.96□□□□□ -1.14
UBR1-203ENST00000562173 SLC15A2Q16348 729 aa7.96□□□□□ -1.14
UBR1-203ENST00000562173 LENG1Q96BZ8 264 aaPredicted RBP7.96□□□□□ -1.14
UBR1-203ENST00000562173 NOC4LQ9BVI4 516 aaKnown RBP7.96□□□□□ -1.14
UBR1-203ENST00000562173 CDK19Q9BWU1 502 aa7.96□□□□□ -1.14
UBR1-203ENST00000562173 SAMM50Q9Y512 469 aa7.96□□□□□ -1.14
UBR1-203ENST00000562173 LTN1O94822 1766 aa7.96□□□□□ -1.14
UBR1-203ENST00000562173 CRB1P82279 1406 aa7.95□□□□□ -1.14
UBR1-203ENST00000562173 SLIT3O75094 1523 aa7.95□□□□□ -1.14
UBR1-203ENST00000562173 HTRA3P83110 453 aa7.95□□□□□ -1.14
UBR1-203ENST00000562173 SCARA3Q6AZY7 606 aa7.95□□□□□ -1.14
UBR1-203ENST00000562173 KLHDC7BQ96G42 594 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms