RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 BTDP43251 543 aa11.29□□□□□ -0.6
SMG1-205ENST00000561947 TFAP4Q01664 338 aa11.29□□□□□ -0.6
SMG1-205ENST00000561947 SP8Q8IXZ3 490 aa11.29□□□□□ -0.6
SMG1-205ENST00000561947 SRBD1Q8N5C6 995 aaKnown RBP11.29□□□□□ -0.6
SMG1-205ENST00000561947 DYNLL2Q96FJ2 89 aa11.29□□□□□ -0.6
SMG1-205ENST00000561947 NAP1L5Q96NT1 182 aaPredicted RBP11.29□□□□□ -0.6
SMG1-205ENST00000561947 CEP131Q9UPN4 1083 aa11.29□□□□□ -0.6
SMG1-205ENST00000561947 MYH1P12882 1939 aa11.29□□□□□ -0.6
SMG1-205ENST00000561947 hCG_1642624A0A1W2PR95 340 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 RBM6P78332 1123 aaKnown RBP11.28□□□□□ -0.6
SMG1-205ENST00000561947 ZNF827Q17R98 1081 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 CCDC178Q5BJE1 867 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 DGKHQ86XP1 1220 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 TBC1D22AQ8WUA7 517 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 ANKS1AQ92625 1134 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 FBXO2Q9UK22 296 aaPredicted RBP11.28□□□□□ -0.6
SMG1-205ENST00000561947 PCDHB6Q9Y5E3 794 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 FAM205AQ6ZU69 1335 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 C6orf229H3BNL8 230 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 PTPREP23469 700 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 CDC25BP30305 580 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 NLRP12P59046 1061 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 MFSD14BQ5SR56 506 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 MAPKAPK5Q8IW41 473 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 BPIFA3Q9BQP9 254 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 KAT14Q9H8E8 782 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 MKNK2Q9HBH9 465 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 CABP5Q9NP86 173 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 IL17RBQ9NRM6 502 aa11.28□□□□□ -0.6
SMG1-205ENST00000561947 MORC2Q9Y6X9 1032 aaPredicted RBP11.28□□□□□ -0.6
SMG1-205ENST00000561947 PLCG2P16885 1265 aa11.27□□□□□ -0.6
SMG1-205ENST00000561947 KIF5BP33176 963 aa11.27□□□□□ -0.6
SMG1-205ENST00000561947 DPCR1Q3MIW9 517 aa11.27□□□□□ -0.6
SMG1-205ENST00000561947 SLF2Q8IX21 1173 aa11.27□□□□□ -0.6
SMG1-205ENST00000561947 NLGN1Q8N2Q7 840 aa11.27□□□□□ -0.6
SMG1-205ENST00000561947 AOPEPQ8N6M6 819 aa11.27□□□□□ -0.6
SMG1-205ENST00000561947 PIBF1Q8WXW3 757 aa11.27□□□□□ -0.6
SMG1-205ENST00000561947 FBXW7Q969H0 707 aa11.27□□□□□ -0.6
SMG1-205ENST00000561947 AKT1S1Q96B36 256 aa11.27□□□□□ -0.6
SMG1-205ENST00000561947 FAM163AQ96GL9 167 aaPredicted RBP11.27□□□□□ -0.6
SMG1-205ENST00000561947 KCNF1Q9H3M0 494 aa11.27□□□□□ -0.6
SMG1-205ENST00000561947 BRMS1Q9HCU9 246 aa11.27□□□□□ -0.6
SMG1-205ENST00000561947 TCP11L1Q9NUJ3 509 aa11.27□□□□□ -0.6
SMG1-205ENST00000561947 KCNH3Q9ULD8 1083 aa11.27□□□□□ -0.6
SMG1-205ENST00000561947 ATP6V0A2Q9Y487 856 aa11.27□□□□□ -0.6
SMG1-205ENST00000561947 COL11A2P13942 1736 aaPredicted RBP11.27□□□□□ -0.61
SMG1-205ENST00000561947 GAKO14976 1311 aa11.27□□□□□ -0.61
SMG1-205ENST00000561947 PLSCR1O15162 318 aa11.27□□□□□ -0.61
SMG1-205ENST00000561947 TEX11Q8IYF3 940 aa11.27□□□□□ -0.61
SMG1-205ENST00000561947 ZNF579Q8NAF0 562 aaKnown RBP11.27□□□□□ -0.61
SMG1-205ENST00000561947 SAP30BPQ9UHR5 308 aaKnown RBP11.27□□□□□ -0.61
SMG1-205ENST00000561947 TUBE1Q9UJT0 475 aa11.27□□□□□ -0.61
SMG1-205ENST00000561947 FAM205CA6NFA0 338 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 TSPY3P0CV98 308 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 TSPY8P0CW00 308 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 SCG2P13521 617 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 PLCD1P51178 756 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 NPY5RQ15761 445 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 QSER1Q2KHR3 1735 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 KRBA2Q6ZNG9 492 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 COL23A1Q86Y22 540 aaPredicted RBP11.26□□□□□ -0.61
SMG1-205ENST00000561947 DRC7Q8IY82 874 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 ZNF444Q8N0Y2 327 aaPredicted RBP11.26□□□□□ -0.61
SMG1-205ENST00000561947 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 TNFRSF25Q93038 417 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 FAM13BQ9NYF5 915 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 SRPRBQ9Y5M8 271 aaKnown RBP11.26□□□□□ -0.61
SMG1-205ENST00000561947 BAZ2BQ9UIF8 2168 aaKnown RBP11.26□□□□□ -0.61
SMG1-205ENST00000561947 TRIM75PA6NK02 468 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 BIN1O00499 593 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 ATP2B1P20020 1258 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 PTGS1P23219 599 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 GRIN1Q05586 938 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 GRM4Q14833 912 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 PFKFB3Q16875 520 aaPredicted RBP11.26□□□□□ -0.61
SMG1-205ENST00000561947 EARS2Q5JPH6 523 aaKnown RBP11.26□□□□□ -0.61
SMG1-205ENST00000561947 ELOA2Q8IYF1 753 aaPredicted RBP11.26□□□□□ -0.61
SMG1-205ENST00000561947 SLC44A5Q8NCS7 719 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 MRFAP1L1Q96HT8 127 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 ZNF287Q9HBT7 754 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 FLT1P17948 1338 aa11.26□□□□□ -0.61
SMG1-205ENST00000561947 SNED1Q8TER0 1413 aa11.25□□□□□ -0.61
SMG1-205ENST00000561947 USP17L3A6NCW0 530 aa11.25□□□□□ -0.61
SMG1-205ENST00000561947 USP17L4A6NCW7 530 aa11.25□□□□□ -0.61
SMG1-205ENST00000561947 SRGNP10124 158 aa11.25□□□□□ -0.61
SMG1-205ENST00000561947 NPR1P16066 1061 aa11.25□□□□□ -0.61
SMG1-205ENST00000561947 RASA1P20936 1047 aa11.25□□□□□ -0.61
SMG1-205ENST00000561947 RHBDL3P58872 404 aa11.25□□□□□ -0.61
SMG1-205ENST00000561947 LONRF3Q496Y0 759 aa11.25□□□□□ -0.61
SMG1-205ENST00000561947 USP17L1Q7RTZ2 530 aa11.25□□□□□ -0.61
SMG1-205ENST00000561947 CNNM3Q8NE01 707 aa11.25□□□□□ -0.61
SMG1-205ENST00000561947 COA1Q9GZY4 146 aa11.25□□□□□ -0.61
SMG1-205ENST00000561947 CLIP2Q9UDT6 1046 aa11.25□□□□□ -0.61
SMG1-205ENST00000561947 PNOCQ13519 176 aa11.25□□□□□ -0.61
SMG1-205ENST00000561947 SPECC1Q5M775 1068 aa11.25□□□□□ -0.61
SMG1-205ENST00000561947 C16orf86Q6ZW13 317 aa11.25□□□□□ -0.61
SMG1-205ENST00000561947 CCDC186Q7Z3E2 898 aa11.25□□□□□ -0.61
SMG1-205ENST00000561947 METTL16Q86W50 562 aaKnown RBP11.25□□□□□ -0.61
SMG1-205ENST00000561947 BMP15O95972 392 aa11.24□□□□□ -0.61
SMG1-205ENST00000561947 APBA3O96018 575 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms