RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 BCL7CQ8WUZ0 217 aaPredicted RBP5.72□□□□□ -1.49
HERC1-215ENST00000561436 GPRASP2Q96D09 838 aa5.72□□□□□ -1.49
HERC1-215ENST00000561436 TINF2Q9BSI4 451 aa5.72□□□□□ -1.49
HERC1-215ENST00000561436 TANGO6Q9C0B7 1094 aa5.72□□□□□ -1.49
HERC1-215ENST00000561436 PAK6Q9NQU5 681 aaPredicted RBP5.72□□□□□ -1.49
HERC1-215ENST00000561436 PRDM7Q9NQW5 492 aa5.72□□□□□ -1.49
HERC1-215ENST00000561436 KLHL3Q9UH77 587 aa5.72□□□□□ -1.49
HERC1-215ENST00000561436 MROH2BQ7Z745 1585 aa5.72□□□□□ -1.49
HERC1-215ENST00000561436 CST3P01034 146 aaPredicted RBP5.71□□□□□ -1.5
HERC1-215ENST00000561436 CD8BP10966 210 aa5.71□□□□□ -1.5
HERC1-215ENST00000561436 RACK1P63244 317 aaKnown RBP5.71□□□□□ -1.5
HERC1-215ENST00000561436 PAK2Q13177 524 aa5.71□□□□□ -1.5
HERC1-215ENST00000561436 NKPD1Q17RQ9 610 aa5.71□□□□□ -1.5
HERC1-215ENST00000561436 CCDC84Q86UT8 332 aaPredicted RBP5.71□□□□□ -1.5
HERC1-215ENST00000561436 VSIG10LQ86VR7 867 aa5.71□□□□□ -1.5
HERC1-215ENST00000561436 KCT2Q8NC54 265 aa5.71□□□□□ -1.5
HERC1-215ENST00000561436 NETO1Q8TDF5 533 aa5.71□□□□□ -1.5
HERC1-215ENST00000561436 ZNF296Q8WUU4 475 aaPredicted RBP5.71□□□□□ -1.5
HERC1-215ENST00000561436 BRMS1Q9HCU9 246 aa5.71□□□□□ -1.5
HERC1-215ENST00000561436 PRDM5Q9NQX1 630 aaPredicted RBP5.71□□□□□ -1.5
HERC1-215ENST00000561436 REV1Q9UBZ9 1251 aa5.71□□□□□ -1.5
HERC1-215ENST00000561436 PPP1R1BQ9UD71 204 aaPredicted RBP5.71□□□□□ -1.5
HERC1-215ENST00000561436 CHURC1-FNTBB4DL54 471 aa5.7□□□□□ -1.5
HERC1-215ENST00000561436 PRNPP04156 253 aa5.7□□□□□ -1.5
HERC1-215ENST00000561436 ATP2B1P20020 1258 aa5.7□□□□□ -1.5
HERC1-215ENST00000561436 DNAJA1P31689 397 aaKnown RBP5.7□□□□□ -1.5
HERC1-215ENST00000561436 GJA8P48165 433 aa5.7□□□□□ -1.5
HERC1-215ENST00000561436 AOC3Q16853 763 aa5.7□□□□□ -1.5
HERC1-215ENST00000561436 CDKAL1Q5VV42 579 aa5.7□□□□□ -1.5
HERC1-215ENST00000561436 FAM196AQ6ZSG2 479 aa5.7□□□□□ -1.5
HERC1-215ENST00000561436 REC114Q7Z4M0 266 aa5.7□□□□□ -1.5
HERC1-215ENST00000561436 SPACA3Q8IXA5 215 aa5.7□□□□□ -1.5
HERC1-215ENST00000561436 FAM13CQ8NE31 585 aa5.7□□□□□ -1.5
HERC1-215ENST00000561436 UBXN4Q92575 508 aa5.7□□□□□ -1.5
HERC1-215ENST00000561436 ROBO2Q9HCK4 1378 aa5.69□□□□□ -1.5
HERC1-215ENST00000561436 WASH4PA8MWX3 477 aa5.69□□□□□ -1.5
HERC1-215ENST00000561436 HTR3BO95264 441 aa5.69□□□□□ -1.5
HERC1-215ENST00000561436 TNNI2P48788 182 aa5.69□□□□□ -1.5
HERC1-215ENST00000561436 APOBRQ0VD83 1088 aa5.69□□□□□ -1.5
HERC1-215ENST00000561436 COL9A2Q14055 689 aaPredicted RBP5.69□□□□□ -1.5
HERC1-215ENST00000561436 SEZ6Q53EL9 994 aa5.69□□□□□ -1.5
HERC1-215ENST00000561436 MRPL41Q8IXM3 137 aaKnown RBP5.69□□□□□ -1.5
HERC1-215ENST00000561436 SLC5A6Q9Y289 635 aa5.69□□□□□ -1.5
HERC1-215ENST00000561436 IFT140Q96RY7 1462 aa5.69□□□□□ -1.5
HERC1-215ENST00000561436 GNAT3A8MTJ3 354 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 H3BS24 57 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 PDE4BQ07343 736 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 PLCL1Q15111 1095 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 IFI16Q16666 785 aaKnown RBP5.68□□□□□ -1.5
HERC1-215ENST00000561436 MCATQ8IVS2 390 aaKnown RBP5.68□□□□□ -1.5
HERC1-215ENST00000561436 MFSD2AQ8NA29 543 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 DNAJB8Q8NHS0 232 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 BAHD1Q8TBE0 780 aaPredicted RBP5.68□□□□□ -1.5
HERC1-215ENST00000561436 RASGRP4Q8TDF6 673 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 PPP1R13LQ8WUF5 828 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 ARMC5Q96C12 935 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 SEC16BQ96JE7 1060 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 HSPA12BQ96MM6 686 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.68□□□□□ -1.54e-9■□□□□ 8.8
HERC1-215ENST00000561436 NT5C1AQ9BXI3 368 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 ANTXR1Q9H6X2 564 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 GTF2IRD1Q9UHL9 959 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 ADAMTS6Q9UKP5 1117 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 STRIP2Q9ULQ0 834 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 PCDHB14Q9Y5E9 798 aa5.68□□□□□ -1.5
HERC1-215ENST00000561436 ABCC8Q09428 1581 aa5.67□□□□□ -1.5
HERC1-215ENST00000561436 FAM155AB1AL88 458 aaPredicted RBP5.67□□□□□ -1.5
HERC1-215ENST00000561436 GREM1O60565 184 aa5.67□□□□□ -1.5
HERC1-215ENST00000561436 LRRN2O75325 713 aa5.67□□□□□ -1.5
HERC1-215ENST00000561436 SSBP05455 408 aaKnown RBP eCLIP5.67□□□□□ -1.5
HERC1-215ENST00000561436 POLR2BP30876 1174 aaKnown RBP5.67□□□□□ -1.5
HERC1-215ENST00000561436 CAP2P40123 477 aa5.67□□□□□ -1.5
HERC1-215ENST00000561436 CLCQ05315 142 aa5.67□□□□□ -1.5
HERC1-215ENST00000561436 MPP2Q14168 576 aa5.67□□□□□ -1.5
HERC1-215ENST00000561436 CWF19L2Q2TBE0 894 aaKnown RBP5.67□□□□□ -1.5
HERC1-215ENST00000561436 SFRP5Q5T4F7 317 aa5.67□□□□□ -1.5
HERC1-215ENST00000561436 SLC6A19Q695T7 634 aa5.67□□□□□ -1.5
HERC1-215ENST00000561436 GK5Q6ZS86 529 aa5.67□□□□□ -1.5
HERC1-215ENST00000561436 NKD1Q969G9 470 aa5.67□□□□□ -1.5
HERC1-215ENST00000561436 EAF1Q96JC9 268 aaPredicted RBP5.67□□□□□ -1.5
HERC1-215ENST00000561436 HRASLS5Q96KN8 279 aa5.67□□□□□ -1.5
HERC1-215ENST00000561436 GMLQ99445 158 aa5.67□□□□□ -1.5
HERC1-215ENST00000561436 KIF2CQ99661 725 aa5.67□□□□□ -1.5
HERC1-215ENST00000561436 ATP13A1Q9HD20 1204 aa5.67□□□□□ -1.5
HERC1-215ENST00000561436 KCNQ5Q9NR82 932 aa5.67□□□□□ -1.5
HERC1-215ENST00000561436 ADGRE2Q9UHX3 823 aa5.67□□□□□ -1.5
HERC1-215ENST00000561436 FAM86C2PA6NEL3 165 aa5.66□□□□□ -1.5
HERC1-215ENST00000561436 MCM4P33991 863 aa5.66□□□□□ -1.5
HERC1-215ENST00000561436 IRAK1P51617 712 aa5.66□□□□□ -1.5
HERC1-215ENST00000561436 IKZF1Q13422 519 aa5.66□□□□□ -1.5
HERC1-215ENST00000561436 SOGA3Q5TF21 947 aa5.66□□□□□ -1.5
HERC1-215ENST00000561436 MFSD4AQ8N468 514 aa5.66□□□□□ -1.5
HERC1-215ENST00000561436 CPLX3Q8WVH0 158 aa5.66□□□□□ -1.5
HERC1-215ENST00000561436 TNKS2Q9H2K2 1166 aa5.66□□□□□ -1.5
HERC1-215ENST00000561436 ADAM30Q9UKF2 790 aa5.66□□□□□ -1.5
HERC1-215ENST00000561436 MAPK8IP1Q9UQF2 711 aa5.66□□□□□ -1.5
HERC1-215ENST00000561436 CAPN6Q9Y6Q1 641 aa5.66□□□□□ -1.5
HERC1-215ENST00000561436 RSF1Q96T23 1441 aaPredicted RBP5.65□□□□□ -1.5
HERC1-215ENST00000561436 TMEM265A0A087WTH1 108 aa5.65□□□□□ -1.5
HERC1-215ENST00000561436 IGF2BP3O00425 579 aaKnown RBP eCLIP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms