RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 FAM221AA4D161 298 aa5.98□□□□□ -1.45
LRRC28-222ENST00000561431 MEGF11A6BM72 1044 aa5.98□□□□□ -1.45
LRRC28-222ENST00000561431 KRTAP9-7A8MTY7 169 aa5.98□□□□□ -1.45
LRRC28-222ENST00000561431 GRIN3BO60391 1043 aa5.98□□□□□ -1.45
LRRC28-222ENST00000561431 RNGTTO60942 597 aaKnown RBP5.98□□□□□ -1.45
LRRC28-222ENST00000561431 PAPLNO95428 1278 aa5.98□□□□□ -1.45
LRRC28-222ENST00000561431 ATF4P18848 351 aaPredicted RBP5.98□□□□□ -1.45
LRRC28-222ENST00000561431 CDK11BP21127 795 aaKnown RBP5.98□□□□□ -1.45
LRRC28-222ENST00000561431 COL9A2Q14055 689 aaPredicted RBP5.98□□□□□ -1.45
LRRC28-222ENST00000561431 MLECQ14165 292 aa5.98□□□□□ -1.45
LRRC28-222ENST00000561431 INPP5AQ14642 412 aa5.98□□□□□ -1.45
LRRC28-222ENST00000561431 ZNF124Q15973 351 aa5.98□□□□□ -1.45
LRRC28-222ENST00000561431 KIF4BQ2VIQ3 1234 aa5.98□□□□□ -1.45
LRRC28-222ENST00000561431 REC114Q7Z4M0 266 aa5.98□□□□□ -1.45
LRRC28-222ENST00000561431 SEC16BQ96JE7 1060 aa5.98□□□□□ -1.45
LRRC28-222ENST00000561431 WDR18Q9BV38 432 aa5.98□□□□□ -1.45
LRRC28-222ENST00000561431 BRMS1Q9HCU9 246 aa5.98□□□□□ -1.45
LRRC28-222ENST00000561431 KCNQ5Q9NR82 932 aa5.98□□□□□ -1.45
LRRC28-222ENST00000561431 BSDC1Q9NW68 430 aaPredicted RBP5.98□□□□□ -1.45
LRRC28-222ENST00000561431 SNCAIPQ9Y6H5 919 aa5.98□□□□□ -1.45
LRRC28-222ENST00000561431 DBX1A6NMT0 343 aa5.97□□□□□ -1.45
LRRC28-222ENST00000561431 CYP26A1O43174 497 aa5.97□□□□□ -1.45
LRRC28-222ENST00000561431 DRD2P14416 443 aa5.97□□□□□ -1.45
LRRC28-222ENST00000561431 RXRBP28702 533 aa5.97□□□□□ -1.45
LRRC28-222ENST00000561431 CDK8P49336 464 aa5.97□□□□□ -1.45
LRRC28-222ENST00000561431 USP11P51784 963 aa5.97□□□□□ -1.45
LRRC28-222ENST00000561431 PDE4BQ07343 736 aa5.97□□□□□ -1.45
LRRC28-222ENST00000561431 LRFN4Q6PJG9 635 aa5.97□□□□□ -1.45
LRRC28-222ENST00000561431 CDC37L1Q7L3B6 337 aa5.97□□□□□ -1.45
LRRC28-222ENST00000561431 AGBL5Q8NDL9 886 aa5.97□□□□□ -1.45
LRRC28-222ENST00000561431 FLCNQ8NFG4 579 aa5.97□□□□□ -1.45
LRRC28-222ENST00000561431 RASGRP4Q8TDF6 673 aa5.97□□□□□ -1.45
LRRC28-222ENST00000561431 METTL22Q9BUU2 404 aaPredicted RBP5.97□□□□□ -1.45
LRRC28-222ENST00000561431 TMPRSS13Q9BYE2 586 aa5.97□□□□□ -1.45
LRRC28-222ENST00000561431 ATXN3LQ9H3M9 355 aa5.97□□□□□ -1.45
LRRC28-222ENST00000561431 IGSF3O75054 1194 aa5.96□□□□□ -1.46
LRRC28-222ENST00000561431 STK10O94804 968 aaKnown RBP5.96□□□□□ -1.46
LRRC28-222ENST00000561431 ADH5P11766 374 aa5.96□□□□□ -1.46
LRRC28-222ENST00000561431 PLCG1P19174 1290 aa5.96□□□□□ -1.46
LRRC28-222ENST00000561431 ASPAP45381 313 aa5.96□□□□□ -1.46
LRRC28-222ENST00000561431 SOX4Q06945 474 aaPredicted RBP5.96□□□□□ -1.46
LRRC28-222ENST00000561431 PPM1JQ5JR12 505 aa5.96□□□□□ -1.46
LRRC28-222ENST00000561431 CCDC81Q6ZN84 652 aa5.96□□□□□ -1.46
LRRC28-222ENST00000561431 SLITRK4Q8IW52 837 aa5.96□□□□□ -1.46
LRRC28-222ENST00000561431 SMG8Q8ND04 991 aaKnown RBP5.96□□□□□ -1.46
LRRC28-222ENST00000561431 ANAPC16Q96DE5 110 aa5.96□□□□□ -1.46
LRRC28-222ENST00000561431 PUS7Q96PZ0 661 aaKnown RBP5.96□□□□□ -1.46
LRRC28-222ENST00000561431 PPT2Q9UMR5 302 aa5.96□□□□□ -1.46
LRRC28-222ENST00000561431 R3HCC1Q9Y3T6 440 aaKnown RBP5.96□□□□□ -1.46
LRRC28-222ENST00000561431 PCDHB14Q9Y5E9 798 aa5.96□□□□□ -1.46
LRRC28-222ENST00000561431 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.96□□□□□ -1.46
LRRC28-222ENST00000561431 FAM95CA0A1B0GW59 222 aa5.95□□□□□ -1.46
LRRC28-222ENST00000561431 TIAF1O95411 115 aa5.95□□□□□ -1.46
LRRC28-222ENST00000561431 PGRP06401 933 aa5.95□□□□□ -1.46
LRRC28-222ENST00000561431 GRK4P32298 578 aa5.95□□□□□ -1.46
LRRC28-222ENST00000561431 ADMP35318 185 aa5.95□□□□□ -1.46
LRRC28-222ENST00000561431 EIF6P56537 245 aaKnown RBP5.95□□□□□ -1.46
LRRC28-222ENST00000561431 ZC3H12AQ5D1E8 599 aaKnown RBP5.95□□□□□ -1.46
LRRC28-222ENST00000561431 DHX38Q92620 1227 aaKnown RBP5.95□□□□□ -1.46
LRRC28-222ENST00000561431 SRRTQ9BXP5 876 aaKnown RBP5.95□□□□□ -1.46
LRRC28-222ENST00000561431 LRRC3Q9BY71 257 aa5.95□□□□□ -1.46
LRRC28-222ENST00000561431 PPP1R9AQ9ULJ8 1098 aa5.95□□□□□ -1.46
LRRC28-222ENST00000561431 STRIP2Q9ULQ0 834 aa5.95□□□□□ -1.46
LRRC28-222ENST00000561431 MRVI1Q9Y6F6 885 aa5.95□□□□□ -1.46
LRRC28-222ENST00000561431 CARMIL2Q6F5E8 1435 aa5.94□□□□□ -1.46
LRRC28-222ENST00000561431 IMPDH2P12268 514 aa5.94□□□□□ -1.46
LRRC28-222ENST00000561431 HCLS1P14317 486 aaPredicted RBP5.94□□□□□ -1.46
LRRC28-222ENST00000561431 RAB6AP20340 208 aa5.94□□□□□ -1.46
LRRC28-222ENST00000561431 ERVK-24P63145 666 aa5.94□□□□□ -1.46
LRRC28-222ENST00000561431 CLCQ05315 142 aa5.94□□□□□ -1.46
LRRC28-222ENST00000561431 NFKBIBQ15653 356 aa5.94□□□□□ -1.46
LRRC28-222ENST00000561431 CYB5RLQ6IPT4 315 aa5.94□□□□□ -1.46
LRRC28-222ENST00000561431 PAOXQ6QHF9 649 aa5.94□□□□□ -1.46
LRRC28-222ENST00000561431 MCF2L2Q86YR7 1114 aa5.94□□□□□ -1.46
LRRC28-222ENST00000561431 REXO1Q8N1G1 1221 aaKnown RBP5.94□□□□□ -1.46
LRRC28-222ENST00000561431 UBXN4Q92575 508 aa5.94□□□□□ -1.46
LRRC28-222ENST00000561431 FANCD2OSQ96PS1 177 aa5.94□□□□□ -1.46
LRRC28-222ENST00000561431 GMLQ99445 158 aa5.94□□□□□ -1.46
LRRC28-222ENST00000561431 YIPF2Q9BWQ6 316 aa5.94□□□□□ -1.46
LRRC28-222ENST00000561431 SUGCTQ9HAC7 445 aa5.94□□□□□ -1.46
LRRC28-222ENST00000561431 CACNA2D2Q9NY47 1150 aa5.94□□□□□ -1.46
LRRC28-222ENST00000561431 CRIM1Q9NZV1 1036 aa5.94□□□□□ -1.46
LRRC28-222ENST00000561431 GFRA2O00451 464 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 FANCGO15287 622 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 TMPRSS2O15393 492 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 HTR3BO95264 441 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 SOX9P48436 509 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 CHMP4BP1P59074 171 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 TTLL4Q14679 1199 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 CDPF1Q6NVV7 123 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 CYFIP1Q7L576 1253 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 ZAR1Q86SH2 424 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 ZNF507Q8TCN5 953 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 FBLIM1Q8WUP2 373 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 GATA6Q92908 595 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 DNAJC2Q99543 621 aaKnown RBP5.93□□□□□ -1.46
LRRC28-222ENST00000561431 REV1Q9UBZ9 1251 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 KLHL3Q9UH77 587 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 POLR3KQ9Y2Y1 108 aaPredicted RBP5.93□□□□□ -1.46
LRRC28-222ENST00000561431 CORINQ9Y5Q5 1042 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms