RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 TTC22Q5TAA0 569 aa12.07□□□□□ -0.48
HERC1-212ENST00000561348 CTU1Q7Z7A3 348 aaKnown RBP12.07□□□□□ -0.48
HERC1-212ENST00000561348 ZNF444Q8N0Y2 327 aaPredicted RBP12.07□□□□□ -0.48
HERC1-212ENST00000561348 ACER1Q8TDN7 264 aa12.07□□□□□ -0.48
HERC1-212ENST00000561348 CHMP4CQ96CF2 233 aa12.07□□□□□ -0.48
HERC1-212ENST00000561348 ERO1AQ96HE7 468 aa12.07□□□□□ -0.48
HERC1-212ENST00000561348 TBC1D2Q9BYX2 928 aa12.07□□□□□ -0.48
HERC1-212ENST00000561348 OSBPL3Q9H4L5 887 aa12.07□□□□□ -0.48
HERC1-212ENST00000561348 ISY1Q9ULR0 285 aaKnown RBP12.07□□□□□ -0.48
HERC1-212ENST00000561348 AGTPBP1Q9UPW5 1226 aa12.07□□□□□ -0.48
HERC1-212ENST00000561348 TLR2O60603 784 aa12.06□□□□□ -0.48
HERC1-212ENST00000561348 GABPAQ06546 454 aa12.06□□□□□ -0.48
HERC1-212ENST00000561348 PABPC4Q13310 644 aaKnown RBP eCLIP12.06□□□□□ -0.48
HERC1-212ENST00000561348 RRP12Q5JTH9 1297 aaKnown RBP12.06□□□□□ -0.48
HERC1-212ENST00000561348 GIMAP6Q6P9H5 292 aa12.06□□□□□ -0.48
HERC1-212ENST00000561348 USP17L2Q6R6M4 530 aa12.06□□□□□ -0.48
HERC1-212ENST00000561348 TMEM179Q6ZVK1 233 aa12.06□□□□□ -0.48
HERC1-212ENST00000561348 C16orf86Q6ZW13 317 aa12.06□□□□□ -0.48
HERC1-212ENST00000561348 CENPQQ7L2Z9 268 aaPredicted RBP12.06□□□□□ -0.48
HERC1-212ENST00000561348 ZNF589Q86UQ0 364 aaPredicted RBP12.06□□□□□ -0.48
HERC1-212ENST00000561348 ANKRD13CQ8N6S4 541 aa12.06□□□□□ -0.48
HERC1-212ENST00000561348 WDR18Q9BV38 432 aa12.06□□□□□ -0.48
HERC1-212ENST00000561348 EFCC1Q9HA90 598 aa12.06□□□□□ -0.48
HERC1-212ENST00000561348 PNMA3Q9UL41 463 aa12.06□□□□□ -0.48
HERC1-212ENST00000561348 TAOK2Q9UL54 1235 aa12.06□□□□□ -0.48
HERC1-212ENST00000561348 PHIPQ8WWQ0 1821 aa12.06□□□□□ -0.48
HERC1-212ENST00000561348 C19orf81C9J6K1 198 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 HIP1O00291 1037 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 FMNL1O95466 1100 aaPredicted RBP12.05□□□□□ -0.48
HERC1-212ENST00000561348 GSPT1P15170 499 aaKnown RBP12.05□□□□□ -0.48
HERC1-212ENST00000561348 MFAP1P55081 439 aaKnown RBP12.05□□□□□ -0.48
HERC1-212ENST00000561348 HAND2P61296 217 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 ICA1Q05084 483 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 PDE4BQ07343 736 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 PPARAQ07869 468 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 SBK1Q52WX2 424 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 FAM47AQ5JRC9 791 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 SPICE1Q8N0Z3 855 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 PROCA1Q8NCQ7 364 aaPredicted RBP12.05□□□□□ -0.48
HERC1-212ENST00000561348 ABHD8Q96I13 439 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 CCDC17Q96LX7 622 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 PAGR1Q9BTK6 254 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 ZNF287Q9HBT7 754 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 ARHGEF10LQ9HCE6 1279 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 INCENPQ9NQS7 918 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 GINM1Q9NU53 330 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 DDX60LQ5H9U9 1706 aaKnown RBP12.05□□□□□ -0.48
HERC1-212ENST00000561348 CCDC171Q6TFL3 1326 aa12.05□□□□□ -0.48
HERC1-212ENST00000561348 RANBP6O60518 1105 aaKnown RBP12.04□□□□□ -0.48
HERC1-212ENST00000561348 MYCP01106 439 aaPredicted RBP12.04□□□□□ -0.48
HERC1-212ENST00000561348 DSG3P32926 999 aa12.04□□□□□ -0.48
HERC1-212ENST00000561348 GUCY1A2P33402 732 aa12.04□□□□□ -0.48
HERC1-212ENST00000561348 ARHGEF6Q15052 776 aa12.04□□□□□ -0.48
HERC1-212ENST00000561348 CCAR1Q8IX12 1150 aaKnown RBP12.04□□□□□ -0.48
HERC1-212ENST00000561348 CFHR5Q9BXR6 569 aa12.04□□□□□ -0.48
HERC1-212ENST00000561348 TANGO6Q9C0B7 1094 aa12.04□□□□□ -0.48
HERC1-212ENST00000561348 ARHGAP39Q9C0H5 1083 aa12.04□□□□□ -0.48
HERC1-212ENST00000561348 ASCC2Q9H1I8 757 aaPredicted RBP12.04□□□□□ -0.48
HERC1-212ENST00000561348 CWC22Q9HCG8 908 aaKnown RBP12.04□□□□□ -0.48
HERC1-212ENST00000561348 ZCCHC17Q9NP64 241 aaKnown RBP12.04□□□□□ -0.48
HERC1-212ENST00000561348 EMILIN3Q9NT22 766 aa12.04□□□□□ -0.48
HERC1-212ENST00000561348 MTMR7Q9Y216 660 aa12.04□□□□□ -0.48
HERC1-212ENST00000561348 PTPRFP10586 1907 aa12.03□□□□□ -0.48
HERC1-212ENST00000561348 PEX10O60683 326 aa12.03□□□□□ -0.48
HERC1-212ENST00000561348 FGAP02671 866 aa12.03□□□□□ -0.48
HERC1-212ENST00000561348 TSPY3P0CV98 308 aa12.03□□□□□ -0.48
HERC1-212ENST00000561348 TSPY8P0CW00 308 aa12.03□□□□□ -0.48
HERC1-212ENST00000561348 HSPD1P10809 573 aaKnown RBP12.03□□□□□ -0.48
HERC1-212ENST00000561348 EEF2P13639 858 aaKnown RBP12.03□□□□□ -0.48
HERC1-212ENST00000561348 RASA1P20936 1047 aa12.03□□□□□ -0.48
HERC1-212ENST00000561348 PSMC4P43686 418 aa12.03□□□□□ -0.48
HERC1-212ENST00000561348 USP14P54578 494 aa12.03□□□□□ -0.48
HERC1-212ENST00000561348 OTOP1Q7RTM1 612 aa12.03□□□□□ -0.48
HERC1-212ENST00000561348 P2RX7Q99572 595 aaKnown RBP12.03□□□□□ -0.48
HERC1-212ENST00000561348 RPAP3Q9H6T3 665 aaPredicted RBP12.03□□□□□ -0.48
HERC1-212ENST00000561348 A0A1W2PRG0 241 aa12.02□□□□□ -0.49
HERC1-212ENST00000561348 TSPY2A6NKD2 308 aa12.02□□□□□ -0.49
HERC1-212ENST00000561348 LACTBP83111 547 aaPredicted RBP12.02□□□□□ -0.49
HERC1-212ENST00000561348 TFAP4Q01664 338 aa12.02□□□□□ -0.49
HERC1-212ENST00000561348 SH3D19Q5HYK7 790 aa12.02□□□□□ -0.49
HERC1-212ENST00000561348 WDR78Q5VTH9 848 aa12.02□□□□□ -0.49
HERC1-212ENST00000561348 C17orf99Q6UX52 265 aa12.02□□□□□ -0.49
HERC1-212ENST00000561348 KIAA1683Q9H0B3 1180 aa12.02□□□□□ -0.49
HERC1-212ENST00000561348 SH2D4AQ9H788 454 aa12.02□□□□□ -0.49
HERC1-212ENST00000561348 KANSL2Q9H9L4 492 aa12.02□□□□□ -0.49
HERC1-212ENST00000561348 CLIP2Q9UDT6 1046 aa12.02□□□□□ -0.49
HERC1-212ENST00000561348 LAMB1P07942 1786 aa12.02□□□□□ -0.49
HERC1-212ENST00000561348 USP17L15C9J2P7 530 aa12.01□□□□□ -0.49
HERC1-212ENST00000561348 USP17L13C9JLJ4 530 aa12.01□□□□□ -0.49
HERC1-212ENST00000561348 USP17L11C9JVI0 530 aa12.01□□□□□ -0.49
HERC1-212ENST00000561348 USP17L18D6R9N7 530 aa12.01□□□□□ -0.49
HERC1-212ENST00000561348 USP17L22D6RA61 530 aa12.01□□□□□ -0.49
HERC1-212ENST00000561348 USP17L17D6RBQ6 530 aa12.01□□□□□ -0.49
HERC1-212ENST00000561348 USP17L19D6RCP7 530 aa12.01□□□□□ -0.49
HERC1-212ENST00000561348 USP17L20D6RJB6 530 aa12.01□□□□□ -0.49
HERC1-212ENST00000561348 TNPO2O14787 897 aaKnown RBP12.01□□□□□ -0.49
HERC1-212ENST00000561348 FOXP2O15409 715 aa12.01□□□□□ -0.49
HERC1-212ENST00000561348 VCAM1P19320 739 aa12.01□□□□□ -0.49
HERC1-212ENST00000561348 FCGRTP55899 365 aa12.01□□□□□ -0.49
HERC1-212ENST00000561348 USP17L24Q0WX57 530 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 177.2 ms