RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 MPHOSPH10O00566 681 aaKnown RBP20.71■□□□□ 0.91
CDC42BPB-208ENST00000561271 HERVK_113P62684 666 aa20.71■□□□□ 0.91
CDC42BPB-208ENST00000561271 SEPT2Q15019 361 aa20.71■□□□□ 0.91
CDC42BPB-208ENST00000561271 C12orf42Q96LP6 360 aa20.71■□□□□ 0.91
CDC42BPB-208ENST00000561271 P2RX7Q99572 595 aaKnown RBP20.71■□□□□ 0.91
CDC42BPB-208ENST00000561271 TAOK2Q9UL54 1235 aa20.71■□□□□ 0.91
CDC42BPB-208ENST00000561271 PLXNA1Q9UIW2 1896 aa20.71■□□□□ 0.91
CDC42BPB-208ENST00000561271 ADCY3O60266 1144 aa20.7■□□□□ 0.9
CDC42BPB-208ENST00000561271 ELNP15502 786 aa20.7■□□□□ 0.9
CDC42BPB-208ENST00000561271 SLAIN1Q8ND83 568 aa20.7■□□□□ 0.9
CDC42BPB-208ENST00000561271 COA7Q96BR5 231 aa20.7■□□□□ 0.9
CDC42BPB-208ENST00000561271 TXNRD2Q9NNW7 524 aa20.7■□□□□ 0.9
CDC42BPB-208ENST00000561271 MORF4L1Q9UBU8 362 aa20.7■□□□□ 0.9
CDC42BPB-208ENST00000561271 BIN2Q9UBW5 565 aaPredicted RBP20.7■□□□□ 0.9
CDC42BPB-208ENST00000561271 TTC41PQ6P2S7 1318 aa20.7■□□□□ 0.9
CDC42BPB-208ENST00000561271 USP17L12C9JPN9 530 aa20.69■□□□□ 0.9
CDC42BPB-208ENST00000561271 USP17L21D6R901 530 aa20.69■□□□□ 0.9
CDC42BPB-208ENST00000561271 VCAM1P19320 739 aa20.69■□□□□ 0.9
CDC42BPB-208ENST00000561271 CLEC10AQ8IUN9 316 aa20.69■□□□□ 0.9
CDC42BPB-208ENST00000561271 PI4K2BQ8TCG2 481 aa20.69■□□□□ 0.9
CDC42BPB-208ENST00000561271 DDRGK1Q96HY6 314 aa20.69■□□□□ 0.9
CDC42BPB-208ENST00000561271 KIAA1683Q9H0B3 1180 aa20.69■□□□□ 0.9
CDC42BPB-208ENST00000561271 SWAP70Q9UH65 585 aa20.69■□□□□ 0.9
CDC42BPB-208ENST00000561271 USP14P54578 494 aa20.68■□□□□ 0.9
CDC42BPB-208ENST00000561271 C12orf60Q5U649 245 aa20.68■□□□□ 0.9
CDC42BPB-208ENST00000561271 AMOTL1Q8IY63 956 aa20.68■□□□□ 0.9
CDC42BPB-208ENST00000561271 APPBP2Q92624 585 aa20.68■□□□□ 0.9
CDC42BPB-208ENST00000561271 PAGR1Q9BTK6 254 aa20.68■□□□□ 0.9
CDC42BPB-208ENST00000561271 ZNF236Q9UL36 1845 aa20.68■□□□□ 0.9
CDC42BPB-208ENST00000561271 INHAP05111 366 aa20.67■□□□□ 0.9
CDC42BPB-208ENST00000561271 CCL5P13501 91 aa20.67■□□□□ 0.9
CDC42BPB-208ENST00000561271 AKR1B1P15121 316 aa20.67■□□□□ 0.9
CDC42BPB-208ENST00000561271 MX1P20591 662 aa20.67■□□□□ 0.9
CDC42BPB-208ENST00000561271 UBXN2AP68543 259 aa20.67■□□□□ 0.9
CDC42BPB-208ENST00000561271 IRF5Q13568 498 aa20.67■□□□□ 0.9
CDC42BPB-208ENST00000561271 OSBP2Q969R2 916 aa20.67■□□□□ 0.9
CDC42BPB-208ENST00000561271 SHISA4Q96DD7 197 aa20.67■□□□□ 0.9
CDC42BPB-208ENST00000561271 A0A1W2PRG0 241 aa20.66■□□□□ 0.9
CDC42BPB-208ENST00000561271 M0R2C6 588 aa20.66■□□□□ 0.9
CDC42BPB-208ENST00000561271 ERC2O15083 957 aa20.66■□□□□ 0.9
CDC42BPB-208ENST00000561271 RNF113AO15541 343 aaKnown RBP20.66■□□□□ 0.9
CDC42BPB-208ENST00000561271 PRPF38BQ5VTL8 546 aaKnown RBP20.66■□□□□ 0.9
CDC42BPB-208ENST00000561271 POTEEQ6S8J3 1075 aa20.66■□□□□ 0.9
CDC42BPB-208ENST00000561271 TMEM179Q6ZVK1 233 aa20.66■□□□□ 0.9
CDC42BPB-208ENST00000561271 STRBPQ96SI9 672 aaKnown RBP20.66■□□□□ 0.9
CDC42BPB-208ENST00000561271 UNC93B1Q9H1C4 597 aa20.66■□□□□ 0.9
CDC42BPB-208ENST00000561271 RBPJLQ9UBG7 517 aa20.66■□□□□ 0.9
CDC42BPB-208ENST00000561271 SALL3Q9BXA9 1300 aa20.66■□□□□ 0.9
CDC42BPB-208ENST00000561271 USP17L15C9J2P7 530 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 USP17L13C9JLJ4 530 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 USP17L11C9JVI0 530 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 USP17L18D6R9N7 530 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 USP17L22D6RA61 530 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 USP17L17D6RBQ6 530 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 USP17L19D6RCP7 530 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 USP17L20D6RJB6 530 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 GLRX3O76003 335 aaKnown RBP20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 CDK8P49336 464 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 ERVK-9P63128 1117 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 ERVK-24P63145 666 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 USP17L24Q0WX57 530 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 CTR9Q6PD62 1173 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 C16orf86Q6ZW13 317 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 GPRC5AQ8NFJ5 357 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 PXYLP1Q8TE99 480 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 RNF208Q9H0X6 261 aa20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 RPAP3Q9H6T3 665 aaPredicted RBP20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 ARPP21Q9UBL0 812 aaPredicted RBP20.65■□□□□ 0.9
CDC42BPB-208ENST00000561271 GPAA1O43292 621 aa20.64■□□□□ 0.89
CDC42BPB-208ENST00000561271 ZFYP08048 801 aaPredicted RBP20.64■□□□□ 0.89
CDC42BPB-208ENST00000561271 ICA1Q05084 483 aa20.64■□□□□ 0.89
CDC42BPB-208ENST00000561271 ANKRD45Q5TZF3 282 aa20.64■□□□□ 0.89
CDC42BPB-208ENST00000561271 GTF3C2Q8WUA4 911 aaPredicted RBP20.64■□□□□ 0.89
CDC42BPB-208ENST00000561271 FSD1Q9BTV5 496 aa20.64■□□□□ 0.89
CDC42BPB-208ENST00000561271 PORCNQ9H237 461 aa20.64■□□□□ 0.89
CDC42BPB-208ENST00000561271 LAMA4Q16363 1823 aa20.64■□□□□ 0.89
CDC42BPB-208ENST00000561271 ROBO3Q96MS0 1386 aa20.63■□□□□ 0.89
CDC42BPB-208ENST00000561271 GSG1L2A8MUP6 293 aa20.63■□□□□ 0.89
CDC42BPB-208ENST00000561271 HDAC1Q13547 482 aaPredicted RBP20.63■□□□□ 0.89
CDC42BPB-208ENST00000561271 CATSPERGQ6ZRH7 1159 aa20.63■□□□□ 0.89
CDC42BPB-208ENST00000561271 EPB41L4AQ9HCS5 686 aaPredicted RBP20.63■□□□□ 0.89
CDC42BPB-208ENST00000561271 ZBTB47Q9UFB7 747 aaPredicted RBP20.63■□□□□ 0.89
CDC42BPB-208ENST00000561271 GJD2Q9UKL4 321 aa20.63■□□□□ 0.89
CDC42BPB-208ENST00000561271 SPDYE16A6NNV3 312 aaPredicted RBP20.62■□□□□ 0.89
CDC42BPB-208ENST00000561271 CNMDO75829 334 aa20.62■□□□□ 0.89
CDC42BPB-208ENST00000561271 GJB1P08034 283 aa20.62■□□□□ 0.89
CDC42BPB-208ENST00000561271 Q3C1V9 767 aa20.62■□□□□ 0.89
CDC42BPB-208ENST00000561271 KIAA1755Q5JYT7 1200 aa20.62■□□□□ 0.89
CDC42BPB-208ENST00000561271 STK11IPQ8N1F8 1099 aa20.62■□□□□ 0.89
CDC42BPB-208ENST00000561271 GCC1Q96CN9 775 aa20.62■□□□□ 0.89
CDC42BPB-208ENST00000561271 SEC62Q99442 399 aaKnown RBP20.62■□□□□ 0.89
CDC42BPB-208ENST00000561271 ARHGEF10LQ9HCE6 1279 aa20.62■□□□□ 0.89
CDC42BPB-208ENST00000561271 CCAR1Q8IX12 1150 aaKnown RBP20.61■□□□□ 0.89
CDC42BPB-208ENST00000561271 CCDC17Q96LX7 622 aa20.61■□□□□ 0.89
CDC42BPB-208ENST00000561271 TANGO6Q9C0B7 1094 aa20.61■□□□□ 0.89
CDC42BPB-208ENST00000561271 RABGAP1Q9Y3P9 1069 aa20.61■□□□□ 0.89
CDC42BPB-208ENST00000561271 MINDY4BA8MYZ0 360 aa20.6■□□□□ 0.89
CDC42BPB-208ENST00000561271 HMGCRP04035 888 aa20.6■□□□□ 0.89
CDC42BPB-208ENST00000561271 CYP2B6P20813 491 aa20.6■□□□□ 0.89
CDC42BPB-208ENST00000561271 MAPK4P31152 587 aa20.6■□□□□ 0.89
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