RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', human

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRPA1-215	ENST00000561187	MCM9	Q9NXL9	1143 aa		32.79	■■■□□ 2.84
SNRPA1-215	ENST00000561187	RANBP2	P49792	3224 aa	Known RBP	32.78	■■■□□ 2.84
SNRPA1-215	ENST00000561187	CYP2D6	P10635	497 aa		32.78	■■■□□ 2.84
SNRPA1-215	ENST00000561187	C20orf194	Q5TEA3	1177 aa		32.78	■■■□□ 2.84
SNRPA1-215	ENST00000561187	POTEE	Q6S8J3	1075 aa		32.78	■■■□□ 2.84
SNRPA1-215	ENST00000561187	MPHOSPH10	O00566	681 aa	Known RBP	32.77	■■■□□ 2.84
SNRPA1-215	ENST00000561187	PAWR	Q96IZ0	340 aa	Known RBP	32.77	■■■□□ 2.84
SNRPA1-215	ENST00000561187	NUDT12	Q9BQG2	462 aa		32.77	■■■□□ 2.84
SNRPA1-215	ENST00000561187	ARMT1	Q9H993	441 aa		32.77	■■■□□ 2.84
SNRPA1-215	ENST00000561187	CWC22	Q9HCG8	908 aa	Known RBP	32.77	■■■□□ 2.84
SNRPA1-215	ENST00000561187	CABP5	Q9NP86	173 aa		32.77	■■■□□ 2.84
SNRPA1-215	ENST00000561187	VCAM1	P19320	739 aa		32.76	■■■□□ 2.83
SNRPA1-215	ENST00000561187	PDE3A	Q14432	1141 aa		32.76	■■■□□ 2.83
SNRPA1-215	ENST00000561187	TCRBV5S4A2T	A0A5A2	114 aa		32.75	■■■□□ 2.83
SNRPA1-215	ENST00000561187	SEPT2	Q15019	361 aa		32.75	■■■□□ 2.83
SNRPA1-215	ENST00000561187	SLC44A5	Q8NCS7	719 aa		32.75	■■■□□ 2.83
SNRPA1-215	ENST00000561187	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	32.75	■■■□□ 2.83
SNRPA1-215	ENST00000561187	CRISPLD2	Q9H0B8	497 aa		32.75	■■■□□ 2.83
SNRPA1-215	ENST00000561187	HMX1	Q9NP08	348 aa	Predicted RBP	32.75	■■■□□ 2.83
SNRPA1-215	ENST00000561187	PAG1	Q9NWQ8	432 aa		32.75	■■■□□ 2.83
SNRPA1-215	ENST00000561187	RAB11FIP3	O75154	756 aa		32.74	■■■□□ 2.83
SNRPA1-215	ENST00000561187	CHGB	P05060	677 aa		32.74	■■■□□ 2.83
SNRPA1-215	ENST00000561187	MAPK4	P31152	587 aa		32.74	■■■□□ 2.83
SNRPA1-215	ENST00000561187	GUCY1A2	P33402	732 aa		32.74	■■■□□ 2.83
SNRPA1-215	ENST00000561187	WDR78	Q5VTH9	848 aa		32.74	■■■□□ 2.83
SNRPA1-215	ENST00000561187	TMED8	Q6PL24	325 aa	Predicted RBP	32.74	■■■□□ 2.83
SNRPA1-215	ENST00000561187	GPR142	Q7Z601	462 aa		32.74	■■■□□ 2.83
SNRPA1-215	ENST00000561187	SOCS4	Q8WXH5	440 aa		32.74	■■■□□ 2.83
SNRPA1-215	ENST00000561187	C12orf42	Q96LP6	360 aa		32.74	■■■□□ 2.83
SNRPA1-215	ENST00000561187	RBM27	Q9P2N5	1060 aa	Known RBP	32.74	■■■□□ 2.83
SNRPA1-215	ENST00000561187	USP17L15	C9J2P7	530 aa		32.73	■■■□□ 2.83
SNRPA1-215	ENST00000561187	USP17L13	C9JLJ4	530 aa		32.73	■■■□□ 2.83
SNRPA1-215	ENST00000561187	USP17L11	C9JVI0	530 aa		32.73	■■■□□ 2.83
SNRPA1-215	ENST00000561187	USP17L18	D6R9N7	530 aa		32.73	■■■□□ 2.83
SNRPA1-215	ENST00000561187	USP17L22	D6RA61	530 aa		32.73	■■■□□ 2.83
SNRPA1-215	ENST00000561187	USP17L17	D6RBQ6	530 aa		32.73	■■■□□ 2.83
SNRPA1-215	ENST00000561187	USP17L19	D6RCP7	530 aa		32.73	■■■□□ 2.83
SNRPA1-215	ENST00000561187	USP17L20	D6RJB6	530 aa		32.73	■■■□□ 2.83
SNRPA1-215	ENST00000561187	PRKAB2	O43741	272 aa		32.73	■■■□□ 2.83
SNRPA1-215	ENST00000561187	EVI5	O60447	810 aa		32.73	■■■□□ 2.83
SNRPA1-215	ENST00000561187	PRKAR2A	P13861	404 aa	Known RBP	32.73	■■■□□ 2.83
SNRPA1-215	ENST00000561187	USP17L24	Q0WX57	530 aa		32.73	■■■□□ 2.83
SNRPA1-215	ENST00000561187	DCP1A	Q9NPI6	582 aa	Predicted RBP	32.73	■■■□□ 2.83
SNRPA1-215	ENST00000561187	NR2E3	Q9Y5X4	410 aa		32.73	■■■□□ 2.83
SNRPA1-215	ENST00000561187	RPTOR	Q8N122	1335 aa		32.73	■■■□□ 2.83
SNRPA1-215	ENST00000561187	CNMD	O75829	334 aa		32.72	■■■□□ 2.83
SNRPA1-215	ENST00000561187	MBD4	O95243	580 aa		32.72	■■■□□ 2.83
SNRPA1-215	ENST00000561187	USP14	P54578	494 aa		32.72	■■■□□ 2.83
SNRPA1-215	ENST00000561187	CCL14	Q16627	93 aa		32.72	■■■□□ 2.83
SNRPA1-215	ENST00000561187	GTF3C2	Q8WUA4	911 aa	Predicted RBP	32.72	■■■□□ 2.83
SNRPA1-215	ENST00000561187	DYNLL2	Q96FJ2	89 aa		32.72	■■■□□ 2.83
SNRPA1-215	ENST00000561187	KIAA1683	Q9H0B3	1180 aa		32.72	■■■□□ 2.83
SNRPA1-215	ENST00000561187	ALPK3	Q96L96	1907 aa		32.72	■■■□□ 2.83
SNRPA1-215	ENST00000561187	SMARCA5	O60264	1052 aa	Predicted RBP	32.71	■■■□□ 2.83
SNRPA1-215	ENST00000561187	ZKSCAN1	P17029	563 aa	Predicted RBP	32.71	■■■□□ 2.83
SNRPA1-215	ENST00000561187	GABPA	Q06546	454 aa		32.71	■■■□□ 2.83
SNRPA1-215	ENST00000561187	PLEKHH3	Q7Z736	793 aa		32.71	■■■□□ 2.83
SNRPA1-215	ENST00000561187	RPAP3	Q9H6T3	665 aa	Predicted RBP	32.71	■■■□□ 2.83
SNRPA1-215	ENST00000561187	CATSPERG	Q6ZRH7	1159 aa		32.7	■■■□□ 2.83
SNRPA1-215	ENST00000561187	CLEC10A	Q8IUN9	316 aa		32.7	■■■□□ 2.83
SNRPA1-215	ENST00000561187	BAZ2A	Q9UIF9	1905 aa	Known RBP	32.7	■■■□□ 2.83
SNRPA1-215	ENST00000561187	ADD2	P35612	726 aa		32.69	■■■□□ 2.82
SNRPA1-215	ENST00000561187	NECAB2	Q7Z6G3	386 aa		32.69	■■■□□ 2.82
SNRPA1-215	ENST00000561187	SZT2	Q5T011	3432 aa		32.68	■■■□□ 2.82
SNRPA1-215	ENST00000561187	CYP2D7	A0A087X1C5	515 aa		32.68	■■■□□ 2.82
SNRPA1-215	ENST00000561187	SMIM22	K7EJ46	135 aa		32.68	■■■□□ 2.82
SNRPA1-215	ENST00000561187	RGS2	P41220	211 aa		32.68	■■■□□ 2.82
SNRPA1-215	ENST00000561187	RABGAP1	Q9Y3P9	1069 aa		32.68	■■■□□ 2.82
SNRPA1-215	ENST00000561187	MYH8	P13535	1937 aa		32.67	■■■□□ 2.82
SNRPA1-215	ENST00000561187		A0A1W2PRG0	241 aa		32.67	■■■□□ 2.82
SNRPA1-215	ENST00000561187	ATP5J	P18859	108 aa		32.67	■■■□□ 2.82
SNRPA1-215	ENST00000561187	MORN1	Q5T089	497 aa		32.67	■■■□□ 2.82
SNRPA1-215	ENST00000561187	APBA2	Q99767	749 aa		32.67	■■■□□ 2.82
SNRPA1-215	ENST00000561187	CHMP4B	Q9H444	224 aa	Known RBP	32.67	■■■□□ 2.82
SNRPA1-215	ENST00000561187	BTBD7	Q9P203	1132 aa		32.67	■■■□□ 2.82
SNRPA1-215	ENST00000561187	SPDYE16	A6NNV3	312 aa	Predicted RBP	32.66	■■■□□ 2.82
SNRPA1-215	ENST00000561187	C7orf61	Q8IZ16	206 aa		32.66	■■■□□ 2.82
SNRPA1-215	ENST00000561187	USP6NL	Q92738	828 aa		32.66	■■■□□ 2.82
SNRPA1-215	ENST00000561187	HAUS7	Q99871	368 aa		32.66	■■■□□ 2.82
SNRPA1-215	ENST00000561187	XRCC5	P13010	732 aa	Known RBP	32.65	■■■□□ 2.82
SNRPA1-215	ENST00000561187	CCND3	P30281	292 aa	Predicted RBP	32.65	■■■□□ 2.82
SNRPA1-215	ENST00000561187	CACNB2	Q08289	660 aa	Predicted RBP	32.65	■■■□□ 2.82
SNRPA1-215	ENST00000561187	MAP3K21	Q5TCX8	1036 aa		32.65	■■■□□ 2.82
SNRPA1-215	ENST00000561187	LRRCC1	Q9C099	1032 aa		32.65	■■■□□ 2.82
SNRPA1-215	ENST00000561187	TANGO6	Q9C0B7	1094 aa		32.65	■■■□□ 2.82
SNRPA1-215	ENST00000561187	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	32.65	■■■□□ 2.82
SNRPA1-215	ENST00000561187	MYH7	P12883	1935 aa		32.65	■■■□□ 2.82
SNRPA1-215	ENST00000561187	CCNA1	P78396	465 aa		32.64	■■■□□ 2.82
SNRPA1-215	ENST00000561187	AKR1B1	P15121	316 aa		32.63	■■■□□ 2.81
SNRPA1-215	ENST00000561187	MNX1	P50219	401 aa	Predicted RBP	32.63	■■■□□ 2.81
SNRPA1-215	ENST00000561187	SAMD1	Q6SPF0	538 aa	Predicted RBP	32.63	■■■□□ 2.81
SNRPA1-215	ENST00000561187	MAP2K5	Q13163	448 aa		32.62	■■■□□ 2.81
SNRPA1-215	ENST00000561187	KIAA1755	Q5JYT7	1200 aa		32.62	■■■□□ 2.81
SNRPA1-215	ENST00000561187	ANKLE1	Q8NAG6	615 aa		32.62	■■■□□ 2.81
SNRPA1-215	ENST00000561187	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	32.62	■■■□□ 2.81
SNRPA1-215	ENST00000561187	TSHZ3	Q63HK5	1081 aa		32.61	■■■□□ 2.81
SNRPA1-215	ENST00000561187	TMEM179	Q6ZVK1	233 aa		32.61	■■■□□ 2.81
SNRPA1-215	ENST00000561187	SPICE1	Q8N0Z3	855 aa		32.61	■■■□□ 2.81
SNRPA1-215	ENST00000561187	NBPF3	Q9H094	633 aa		32.61	■■■□□ 2.81
SNRPA1-215	ENST00000561187	C11orf49	Q9H6J7	331 aa		32.61	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms