RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 NBPF3Q9H094 633 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 ATP8A2Q9NTI2 1148 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 ARPP21Q9UBL0 812 aaPredicted RBP9.5□□□□□ -0.89
CPNE6-218ENST00000560845 CIZ1Q9ULV3 898 aaPredicted RBP9.5□□□□□ -0.89
CPNE6-218ENST00000560845 LIMCH1Q9UPQ0 1083 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 DAGLAQ9Y4D2 1042 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 NEDD4P46934 1319 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 IRF6O14896 467 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 GNRH1P01148 92 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 MCM4P33991 863 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 FGD1P98174 961 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 HDLBPQ00341 1268 aaKnown RBP9.49□□□□□ -0.89
CPNE6-218ENST00000560845 CTDSPL2Q05D32 466 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 PPIL2Q13356 520 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 SNAPC2Q13487 334 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 ERO1BQ86YB8 467 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 MB21D2Q8IYB1 491 aaPredicted RBP9.49□□□□□ -0.89
CPNE6-218ENST00000560845 TEX11Q8IYF3 940 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 STAG1Q8WVM7 1258 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 ZKSCAN4Q969J2 545 aaPredicted RBP9.49□□□□□ -0.89
CPNE6-218ENST00000560845 TEKT1Q969V4 418 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 ZSCAN31Q96LW9 406 aaPredicted RBP9.49□□□□□ -0.89
CPNE6-218ENST00000560845 ALDH8A1Q9H2A2 487 aaPredicted RBP9.49□□□□□ -0.89
CPNE6-218ENST00000560845 RNF41Q9H4P4 317 aaPredicted RBP9.49□□□□□ -0.89
CPNE6-218ENST00000560845 CNNM2Q9H8M5 875 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 DCP1AQ9NPI6 582 aaPredicted RBP9.49□□□□□ -0.89
CPNE6-218ENST00000560845 SH2B1Q9NRF2 756 aaPredicted RBP9.49□□□□□ -0.89
CPNE6-218ENST00000560845 FOXD4L1Q9NU39 408 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 TMOD2Q9NZR1 351 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 ANAPC4Q9UJX5 808 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 WDR19Q8NEZ3 1342 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 NAV1Q8NEY1 1877 aa9.49□□□□□ -0.89
CPNE6-218ENST00000560845 RANBP2P49792 3224 aaKnown RBP9.48□□□□□ -0.89
CPNE6-218ENST00000560845 DDX60LQ5H9U9 1706 aaKnown RBP9.48□□□□□ -0.89
CPNE6-218ENST00000560845 MINDY4BA8MYZ0 360 aa9.48□□□□□ -0.89
CPNE6-218ENST00000560845 PRC1O43663 620 aa9.48□□□□□ -0.89
CPNE6-218ENST00000560845 MCM5P33992 734 aa9.48□□□□□ -0.89
CPNE6-218ENST00000560845 PRMT2P55345 433 aa9.48□□□□□ -0.89
CPNE6-218ENST00000560845 CUL4AQ13619 759 aa9.48□□□□□ -0.89
CPNE6-218ENST00000560845 TOB2Q14106 344 aaPredicted RBP9.48□□□□□ -0.89
CPNE6-218ENST00000560845 RAB3GAP1Q15042 981 aa9.48□□□□□ -0.89
CPNE6-218ENST00000560845 AKNAD1Q5T1N1 836 aa9.48□□□□□ -0.89
CPNE6-218ENST00000560845 HHIPL2Q6UWX4 724 aa9.48□□□□□ -0.89
CPNE6-218ENST00000560845 Q6ZUG5 572 aa9.48□□□□□ -0.89
CPNE6-218ENST00000560845 FAM83AQ86UY5 434 aa9.48□□□□□ -0.89
CPNE6-218ENST00000560845 AMOTL1Q8IY63 956 aa9.48□□□□□ -0.89
CPNE6-218ENST00000560845 SHISA4Q96DD7 197 aa9.48□□□□□ -0.89
CPNE6-218ENST00000560845 HOOK2Q96ED9 719 aa9.48□□□□□ -0.89
CPNE6-218ENST00000560845 ZDHHC15Q96MV8 337 aa9.48□□□□□ -0.89
CPNE6-218ENST00000560845 SZT2Q5T011 3432 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 ZSWIM8A7E2V4 1837 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 MYH2Q9UKX2 1941 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 CYP2D7A0A087X1C5 515 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 B4E1Z4 1266 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 USP17L12C9JPN9 530 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 USP17L21D6R901 530 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 ECM2O94769 699 aaPredicted RBP9.47□□□□□ -0.89
CPNE6-218ENST00000560845 LARGE1O95461 756 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 SLC3A2P08195 630 aaKnown RBP9.47□□□□□ -0.89
CPNE6-218ENST00000560845 PCP11498 1178 aaKnown RBP9.47□□□□□ -0.89
CPNE6-218ENST00000560845 ANTXR2P58335 489 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 RHBDL3P58872 404 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 EXOSC10Q01780 885 aaKnown RBP9.47□□□□□ -0.89
CPNE6-218ENST00000560845 MTFR1Q15390 333 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 SBK1Q52WX2 424 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 FKBP1CQ5VVH2 108 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 DCAF15Q66K64 600 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 APOBEC3HQ6NTF7 200 aaKnown RBP9.47□□□□□ -0.89
CPNE6-218ENST00000560845 CTR9Q6PD62 1173 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 C17orf99Q6UX52 265 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 CHRDL2Q6WN34 429 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 MFSD6Q6ZSS7 791 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 TGFBRAP1Q8WUH2 860 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 BRF1Q92994 677 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 INTS4Q96HW7 963 aaKnown RBP9.47□□□□□ -0.89
CPNE6-218ENST00000560845 LARP6Q9BRS8 491 aaKnown RBP9.47□□□□□ -0.89
CPNE6-218ENST00000560845 LRRC2Q9BYS8 371 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 KRT23Q9C075 422 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 TOMM22Q9NS69 142 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 MCM9Q9NXL9 1143 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 CPA4Q9UI42 421 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 TPCN1Q9ULQ1 816 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 FLT1P17948 1338 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 ROBO3Q96MS0 1386 aa9.47□□□□□ -0.89
CPNE6-218ENST00000560845 CYP2D6P10635 497 aa9.46□□□□□ -0.9
CPNE6-218ENST00000560845 CTGFP29279 349 aa9.46□□□□□ -0.9
CPNE6-218ENST00000560845 PSMC4P43686 418 aa9.46□□□□□ -0.9
CPNE6-218ENST00000560845 PPATQ06203 517 aa9.46□□□□□ -0.9
CPNE6-218ENST00000560845 ME3Q16798 604 aa9.46□□□□□ -0.9
CPNE6-218ENST00000560845 RRP12Q5JTH9 1297 aaKnown RBP9.46□□□□□ -0.9
CPNE6-218ENST00000560845 ANKRD23Q86SG2 305 aa9.46□□□□□ -0.9
CPNE6-218ENST00000560845 MAPKAPK5Q8IW41 473 aa9.46□□□□□ -0.9
CPNE6-218ENST00000560845 TNPO1Q92973 898 aaKnown RBP9.46□□□□□ -0.9
CPNE6-218ENST00000560845 TRIM47Q96LD4 638 aa9.46□□□□□ -0.9
CPNE6-218ENST00000560845 MRIQ9BWK5 157 aa9.46□□□□□ -0.9
CPNE6-218ENST00000560845 ZNF341Q9BYN7 854 aa9.46□□□□□ -0.9
CPNE6-218ENST00000560845 AGXT2Q9BYV1 514 aa9.46□□□□□ -0.9
CPNE6-218ENST00000560845 SRRDQ9UH36 339 aa9.46□□□□□ -0.9
CPNE6-218ENST00000560845 ADGRA2Q96PE1 1338 aa9.46□□□□□ -0.9
CPNE6-218ENST00000560845 PDHXO00330 501 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms