RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 CNGA1P29973 690 aa12.22□□□□□ -0.45
TPM1-225ENST00000560679 ZYXQ15942 572 aaKnown RBP12.22□□□□□ -0.45
TPM1-225ENST00000560679 USP17L2Q6R6M4 530 aa12.22□□□□□ -0.45
TPM1-225ENST00000560679 SLC39A5Q6ZMH5 540 aa12.22□□□□□ -0.45
TPM1-225ENST00000560679 TGFBRAP1Q8WUH2 860 aa12.22□□□□□ -0.45
TPM1-225ENST00000560679 TRIM43Q96BQ3 446 aaPredicted RBP12.22□□□□□ -0.45
TPM1-225ENST00000560679 CWC22Q9HCG8 908 aaKnown RBP12.22□□□□□ -0.45
TPM1-225ENST00000560679 RAPGEFL1Q9UHV5 662 aa12.22□□□□□ -0.45
TPM1-225ENST00000560679 PALD1Q9ULE6 856 aa12.22□□□□□ -0.45
TPM1-225ENST00000560679 AKAP2Q9Y2D5 859 aa12.22□□□□□ -0.45
TPM1-225ENST00000560679 GH2P01242 217 aa12.21□□□□□ -0.45
TPM1-225ENST00000560679 VCAM1P19320 739 aa12.21□□□□□ -0.45
TPM1-225ENST00000560679 COL9A1P20849 921 aa12.21□□□□□ -0.45
TPM1-225ENST00000560679 ITGB8P26012 769 aa12.21□□□□□ -0.45
TPM1-225ENST00000560679 EPHB4P54760 987 aa12.21□□□□□ -0.45
TPM1-225ENST00000560679 WDR78Q5VTH9 848 aa12.21□□□□□ -0.45
TPM1-225ENST00000560679 ANO1Q5XXA6 986 aa12.21□□□□□ -0.45
TPM1-225ENST00000560679 LBX2Q6XYB7 198 aa12.21□□□□□ -0.45
TPM1-225ENST00000560679 CRACR2BQ8N4Y2 399 aaPredicted RBP12.21□□□□□ -0.45
TPM1-225ENST00000560679 SYMPKQ92797 1274 aaKnown RBP12.21□□□□□ -0.45
TPM1-225ENST00000560679 YTHDC1Q96MU7 727 aaKnown RBP12.21□□□□□ -0.45
TPM1-225ENST00000560679 SMC4Q9NTJ3 1288 aa12.21□□□□□ -0.45
TPM1-225ENST00000560679 MYH1P12882 1939 aa12.21□□□□□ -0.46
TPM1-225ENST00000560679 TMEM265A0A087WTH1 108 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 SPDYE16A6NNV3 312 aaPredicted RBP12.2□□□□□ -0.46
TPM1-225ENST00000560679 USP17L15C9J2P7 530 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 USP17L13C9JLJ4 530 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 USP17L11C9JVI0 530 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 USP17L18D6R9N7 530 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 USP17L22D6RA61 530 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 USP17L17D6RBQ6 530 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 USP17L19D6RCP7 530 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 USP17L20D6RJB6 530 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 SRGAP3O43295 1099 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 PPP4CP60510 307 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 CCNA1P78396 465 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 ATP2B2Q01814 1243 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 USP17L24Q0WX57 530 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 MTX1Q13505 466 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 ALDH1L2Q3SY69 923 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 CATSPERGQ6ZRH7 1159 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 NEUROD6Q96NK8 337 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 SAP30BPQ9UHR5 308 aaKnown RBP12.2□□□□□ -0.46
TPM1-225ENST00000560679 XIRP2A4UGR9 3374 aa12.2□□□□□ -0.46
TPM1-225ENST00000560679 BDP1A6H8Y1 2624 aa12.19□□□□□ -0.46
TPM1-225ENST00000560679 KBTBD13C9JR72 458 aa12.19□□□□□ -0.46
TPM1-225ENST00000560679 E9PSI1 815 aa12.19□□□□□ -0.46
TPM1-225ENST00000560679 GLRX3O76003 335 aaKnown RBP12.19□□□□□ -0.46
TPM1-225ENST00000560679 PLCG2P16885 1265 aa12.19□□□□□ -0.46
TPM1-225ENST00000560679 GRIN2CQ14957 1233 aa12.19□□□□□ -0.46
TPM1-225ENST00000560679 TJAP1Q5JTD0 557 aa12.19□□□□□ -0.46
TPM1-225ENST00000560679 NAA16Q6N069 864 aaPredicted RBP12.19□□□□□ -0.46
TPM1-225ENST00000560679 FOXP4Q8IVH2 680 aaPredicted RBP12.19□□□□□ -0.46
TPM1-225ENST00000560679 FAM9BQ8IZU0 186 aa12.19□□□□□ -0.46
TPM1-225ENST00000560679 ACER1Q8TDN7 264 aa12.19□□□□□ -0.46
TPM1-225ENST00000560679 FEZ1Q99689 392 aa12.19□□□□□ -0.46
TPM1-225ENST00000560679 TRIM34Q9BYJ4 488 aa12.19□□□□□ -0.46
TPM1-225ENST00000560679 LRP2BPQ9P2M1 347 aa12.19□□□□□ -0.46
TPM1-225ENST00000560679 REV3LO60673 3130 aa12.19□□□□□ -0.46
TPM1-225ENST00000560679 TNFRSF10AO00220 468 aa12.18□□□□□ -0.46
TPM1-225ENST00000560679 SEPT4O43236 478 aa12.18□□□□□ -0.46
TPM1-225ENST00000560679 ADORA2AP29274 412 aa12.18□□□□□ -0.46
TPM1-225ENST00000560679 ADCYAP1R1P41586 468 aa12.18□□□□□ -0.46
TPM1-225ENST00000560679 SLFN5Q08AF3 891 aa12.18□□□□□ -0.46
TPM1-225ENST00000560679 FAM47AQ5JRC9 791 aa12.18□□□□□ -0.46
TPM1-225ENST00000560679 C1orf53Q5VUE5 145 aa12.18□□□□□ -0.46
TPM1-225ENST00000560679 OLFML2BQ68BL8 750 aa12.18□□□□□ -0.46
TPM1-225ENST00000560679 TATDN1Q6P1N9 297 aa12.18□□□□□ -0.46
TPM1-225ENST00000560679 ARRDC4Q8NCT1 418 aa12.18□□□□□ -0.46
TPM1-225ENST00000560679 RNPC3Q96LT9 517 aaKnown RBP12.18□□□□□ -0.46
TPM1-225ENST00000560679 NOL10Q9BSC4 688 aaKnown RBP12.18□□□□□ -0.46
TPM1-225ENST00000560679 KIAA1683Q9H0B3 1180 aa12.18□□□□□ -0.46
TPM1-225ENST00000560679 SNRKQ9NRH2 765 aa12.18□□□□□ -0.46
TPM1-225ENST00000560679 CHD7Q9P2D1 2997 aa12.18□□□□□ -0.46
TPM1-225ENST00000560679 NOB1Q9ULX3 412 aaKnown RBP12.18□□□□□ -0.46
TPM1-225ENST00000560679 IVNS1ABPQ9Y6Y0 642 aa12.18□□□□□ -0.46
TPM1-225ENST00000560679 PARP14Q460N5 1801 aa12.17□□□□□ -0.46
TPM1-225ENST00000560679 COBLO75128 1261 aa12.17□□□□□ -0.46
TPM1-225ENST00000560679 BAG3O95817 575 aa12.17□□□□□ -0.46
TPM1-225ENST00000560679 CYP2E1P05181 493 aaPredicted RBP12.17□□□□□ -0.46
TPM1-225ENST00000560679 HLA-DOAP06340 250 aa12.17□□□□□ -0.46
TPM1-225ENST00000560679 DYNLL1P63167 89 aaKnown RBP12.17□□□□□ -0.46
TPM1-225ENST00000560679 TLE2Q04725 743 aa12.17□□□□□ -0.46
TPM1-225ENST00000560679 LRRC41Q15345 812 aa12.17□□□□□ -0.46
TPM1-225ENST00000560679 GORABQ5T7V8 394 aa12.17□□□□□ -0.46
TPM1-225ENST00000560679 FERMT2Q96AC1 680 aa12.17□□□□□ -0.46
TPM1-225ENST00000560679 MOV10L1Q9BXT6 1211 aaKnown RBP12.17□□□□□ -0.46
TPM1-225ENST00000560679 RPAP3Q9H6T3 665 aaPredicted RBP12.17□□□□□ -0.46
TPM1-225ENST00000560679 UQCRFS1P1P0C7P4 283 aa12.16□□□□□ -0.46
TPM1-225ENST00000560679 DNAJB2P25686 324 aa12.16□□□□□ -0.46
TPM1-225ENST00000560679 GUCY1A2P33402 732 aa12.16□□□□□ -0.46
TPM1-225ENST00000560679 RAB3GAP1Q15042 981 aa12.16□□□□□ -0.46
TPM1-225ENST00000560679 PIH1D3Q9NQM4 214 aaKnown RBP12.16□□□□□ -0.46
TPM1-225ENST00000560679 NAV1Q8NEY1 1877 aa12.16□□□□□ -0.46
TPM1-225ENST00000560679 PNMA6EA0A0J9YXQ4 647 aa12.15□□□□□ -0.46
TPM1-225ENST00000560679 MYCNP04198 464 aaPredicted RBP12.15□□□□□ -0.46
TPM1-225ENST00000560679 CLTBP09497 229 aa12.15□□□□□ -0.46
TPM1-225ENST00000560679 SHMT1P34896 483 aa12.15□□□□□ -0.46
TPM1-225ENST00000560679 USP14P54578 494 aa12.15□□□□□ -0.46
TPM1-225ENST00000560679 PRAMEF19Q5SWL8 479 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms