RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 E2F4Q16254 413 aa9.63□□□□□ -0.87
LRRC28-219ENST00000560483 RILPL2Q969X0 211 aa9.63□□□□□ -0.87
LRRC28-219ENST00000560483 WNK4Q96J92 1243 aa9.63□□□□□ -0.87
LRRC28-219ENST00000560483 ZIC5Q96T25 663 aa9.63□□□□□ -0.87
LRRC28-219ENST00000560483 OSBPL5Q9H0X9 879 aaPredicted RBP9.63□□□□□ -0.87
LRRC28-219ENST00000560483 ARMT1Q9H993 441 aa9.63□□□□□ -0.87
LRRC28-219ENST00000560483 RBM27Q9P2N5 1060 aaKnown RBP9.63□□□□□ -0.87
LRRC28-219ENST00000560483 SSC5DA1L4H1 1573 aa9.63□□□□□ -0.87
LRRC28-219ENST00000560483 RPAP1Q9BWH6 1393 aaPredicted RBP9.63□□□□□ -0.87
LRRC28-219ENST00000560483 FLT1P17948 1338 aa9.62□□□□□ -0.87
LRRC28-219ENST00000560483 FAM196BA6NMK8 535 aa9.62□□□□□ -0.87
LRRC28-219ENST00000560483 FAM155AB1AL88 458 aaPredicted RBP9.62□□□□□ -0.87
LRRC28-219ENST00000560483 FOXN1O15353 648 aa9.62□□□□□ -0.87
LRRC28-219ENST00000560483 TRPA1O75762 1119 aa9.62□□□□□ -0.87
LRRC28-219ENST00000560483 MBD4O95243 580 aa9.62□□□□□ -0.87
LRRC28-219ENST00000560483 APPP05067 770 aa9.62□□□□□ -0.87
LRRC28-219ENST00000560483 INPP5BP32019 993 aa9.62□□□□□ -0.87
LRRC28-219ENST00000560483 MAP3K11Q16584 847 aa9.62□□□□□ -0.87
LRRC28-219ENST00000560483 LDLRAD1Q5T700 205 aa9.62□□□□□ -0.87
LRRC28-219ENST00000560483 SPRYD7Q5W111 196 aa9.62□□□□□ -0.87
LRRC28-219ENST00000560483 OTUD7BQ6GQQ9 843 aa9.62□□□□□ -0.87
LRRC28-219ENST00000560483 CHD1LQ86WJ1 897 aa9.62□□□□□ -0.87
LRRC28-219ENST00000560483 DHX36Q9H2U1 1008 aaKnown RBP9.62□□□□□ -0.87
LRRC28-219ENST00000560483 MCM9Q9NXL9 1143 aa9.62□□□□□ -0.87
LRRC28-219ENST00000560483 PALD1Q9ULE6 856 aa9.62□□□□□ -0.87
LRRC28-219ENST00000560483 MYH1P12882 1939 aa9.62□□□□□ -0.87
LRRC28-219ENST00000560483 OTOFQ9HC10 1997 aa9.61□□□□□ -0.87
LRRC28-219ENST00000560483 MANSC4A6NHS7 340 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-219ENST00000560483 ZBTB48P10074 688 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-219ENST00000560483 ADD2P35612 726 aa9.61□□□□□ -0.87
LRRC28-219ENST00000560483 LBX1P52954 281 aa9.61□□□□□ -0.87
LRRC28-219ENST00000560483 SLFNL1Q499Z3 407 aa9.61□□□□□ -0.87
LRRC28-219ENST00000560483 TMED8Q6PL24 325 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-219ENST00000560483 LCORLQ8N3X6 602 aa9.61□□□□□ -0.87
LRRC28-219ENST00000560483 KBTBD3Q8NAB2 608 aa9.61□□□□□ -0.87
LRRC28-219ENST00000560483 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.61□□□□□ -0.87
LRRC28-219ENST00000560483 SDR42E1Q8WUS8 393 aa9.61□□□□□ -0.87
LRRC28-219ENST00000560483 PI4KBQ9UBF8 816 aa9.61□□□□□ -0.87
LRRC28-219ENST00000560483 ARIH1Q9Y4X5 557 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-219ENST00000560483 SLC4A4Q9Y6R1 1079 aa9.61□□□□□ -0.87
LRRC28-219ENST00000560483 CCL15-CCL14A0A0B4J2E2 113 aa9.6□□□□□ -0.87
LRRC28-219ENST00000560483 UNCXA6NJT0 531 aa9.6□□□□□ -0.87
LRRC28-219ENST00000560483 MPHOSPH10O00566 681 aaKnown RBP9.6□□□□□ -0.87
LRRC28-219ENST00000560483 RNF113AO15541 343 aaKnown RBP9.6□□□□□ -0.87
LRRC28-219ENST00000560483 CA12O43570 354 aa9.6□□□□□ -0.87
LRRC28-219ENST00000560483 ZFYP08048 801 aaPredicted RBP9.6□□□□□ -0.87
LRRC28-219ENST00000560483 SLURP2P0DP57 97 aa9.6□□□□□ -0.87
LRRC28-219ENST00000560483 GTF2A2P52657 109 aa9.6□□□□□ -0.87
LRRC28-219ENST00000560483 PDE1AP54750 535 aa9.6□□□□□ -0.87
LRRC28-219ENST00000560483 NUCB1Q02818 461 aa9.6□□□□□ -0.87
LRRC28-219ENST00000560483 UBE3CQ15386 1083 aa9.6□□□□□ -0.87
LRRC28-219ENST00000560483 CCL15Q16663 113 aa9.6□□□□□ -0.87
LRRC28-219ENST00000560483 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.6□□□□□ -0.87
LRRC28-219ENST00000560483 TTC6Q86TZ1 520 aa9.6□□□□□ -0.87
LRRC28-219ENST00000560483 ERO1BQ86YB8 467 aa9.6□□□□□ -0.87
LRRC28-219ENST00000560483 SMC5Q8IY18 1101 aa9.6□□□□□ -0.87
LRRC28-219ENST00000560483 NAV1Q8NEY1 1877 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 CDK5RAP2Q96SN8 1893 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 GDF11O95390 407 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 CHGBP05060 677 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 TDO2P48775 406 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 SNAPC2Q13487 334 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 LIAT1Q6ZQX7 453 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 GADL1Q6ZQY3 521 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 SH3BP5LQ7L8J4 393 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 SCYL3Q8IZE3 742 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 STK11IPQ8N1F8 1099 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 PI4K2BQ8TCG2 481 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 APPBP2Q92624 585 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 EVI5LQ96CN4 794 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 CCDC136Q96JN2 1154 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 RNF186Q9NXI6 227 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 HERC5Q9UII4 1024 aaKnown RBP9.59□□□□□ -0.87
LRRC28-219ENST00000560483 SNCAIPQ9Y6H5 919 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 ZHX2Q9Y6X8 837 aa9.59□□□□□ -0.87
LRRC28-219ENST00000560483 TCRBV5S4A2TA0A5A2 114 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 SPDYE5A6NIY4 337 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 TRIM75PA6NK02 468 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 MINDY4BA8MYZ0 360 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 PRKAB2O43741 272 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 CTNND1O60716 968 aaKnown RBP9.58□□□□□ -0.88
LRRC28-219ENST00000560483 TBC1D8O95759 1140 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 ALDH1A1P00352 501 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 CETPP11597 493 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 SLC19A1P41440 591 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 INHBEP58166 350 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 PPATQ06203 517 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 PLA2G2CQ5R387 149 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 FOXP4Q8IVH2 680 aaPredicted RBP9.58□□□□□ -0.88
LRRC28-219ENST00000560483 RIOK1Q9BRS2 568 aaKnown RBP9.58□□□□□ -0.88
LRRC28-219ENST00000560483 PUS7LQ9H0K6 701 aaKnown RBP9.58□□□□□ -0.88
LRRC28-219ENST00000560483 AS3MTQ9HBK9 375 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 CABP5Q9NP86 173 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 SERPINB13Q9UIV8 391 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 PCDHB3Q9Y5E6 796 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 RFX7Q2KHR2 1363 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 FOCADQ5VW36 1801 aa9.58□□□□□ -0.88
LRRC28-219ENST00000560483 BAZ2AQ9UIF9 1905 aaKnown RBP9.58□□□□□ -0.88
LRRC28-219ENST00000560483 CASP8AP2Q9UKL3 1982 aa9.57□□□□□ -0.88
LRRC28-219ENST00000560483 M0R2C6 588 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms