RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	TRMT44	Q8IYL2	757 aa	Known RBP	6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	EPSTI1	Q96J88	318 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	CSRNP2	Q9H175	543 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	MYH1	P12882	1939 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	NID2	Q14112	1375 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	NAV1	Q8NEY1	1877 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	ERICH2	A1L162	156 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	USP17L3	A6NCW0	530 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	USP17L4	A6NCW7	530 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	TOM1	O60784	492 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	SMC2	O95347	1197 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	SLURP2	P0DP57	97 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	FMR1	Q06787	632 aa	Known RBP eCLIP	6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	ZNF174	Q15697	407 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	IFIT1B	Q5T764	474 aa	Known RBP	6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	KRBA2	Q6ZNG9	492 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	USP17L1	Q7RTZ2	530 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	TMC6	Q7Z403	805 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	STAG2	Q8N3U4	1231 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	ESR2	Q92731	530 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	MRFAP1L1	Q96HT8	127 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	IL17RB	Q9NRM6	502 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	GNL3L	Q9NVN8	582 aa	Known RBP	6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	SAP30BP	Q9UHR5	308 aa	Known RBP	6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	TUBE1	Q9UJT0	475 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	RTCB	Q9Y3I0	505 aa	Known RBP	6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	MAST2	Q6P0Q8	1798 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	BRWD3	Q6RI45	1802 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	GOLGA6L6	A8MZA4	724 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	DEXI	O95424	95 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	PLCD1	P51178	756 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	SART3	Q15020	963 aa	Known RBP	6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	FNBP4	Q8N3X1	1017 aa	Predicted RBP	6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	RASGRP4	Q8TDF6	673 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	ANKRD7	Q92527	254 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	BRIP1	Q9BX63	1249 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	INTS13	Q9NVM9	706 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	FANCL	Q9NW38	375 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	ANKIB1	Q9P2G1	1089 aa		6.63	□□□□□ -1.35
LRRC49-223	ENST00000560369	CNTNAP5	Q8WYK1	1306 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	DDX60L	Q5H9U9	1706 aa	Known RBP	6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	NPHP1	O15259	732 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	CUTA	O60888	179 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	SKIL	P12757	684 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	PTPRE	P23469	700 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	CDC25A	P30304	524 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	CDC25B	P30305	580 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	GPSM2	P81274	684 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	NCBP1	Q09161	790 aa	Known RBP	6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	IL17A	Q16552	155 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	TYW1B	Q6NUM6	668 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	TPTE2	Q6XPS3	522 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	TRIM22	Q8IYM9	498 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	SMYD4	Q8IYR2	804 aa	Predicted RBP	6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	KLHL34	Q8N239	644 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	KRI1	Q8N9T8	703 aa	Known RBP	6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	CNNM3	Q8NE01	707 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	PHF20	Q9BVI0	1012 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	MCM9	Q9NXL9	1143 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	MAN1B1	Q9UKM7	699 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	FAM237A	A0A1B0GTK4	181 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	FGR	P09769	529 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	RFC4	P35249	363 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	AFM	P43652	599 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	RBM6	P78332	1123 aa	Known RBP	6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	FANCC	Q00597	558 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	RC3H1	Q5TC82	1133 aa	Known RBP	6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	PRR5L	Q6MZQ0	368 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	ZNF592	Q92610	1267 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	TNFRSF25	Q93038	417 aa		6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	FOXP1	Q9H334	677 aa	Predicted RBP	6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	RNF41	Q9H4P4	317 aa	Predicted RBP	6.62	□□□□□ -1.35
LRRC49-223	ENST00000560369	SRCAP	Q6ZRS2	3230 aa		6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	FAM205A	Q6ZU69	1335 aa		6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	CTIF	O43310	598 aa	Known RBP	6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	ACTN4	O43707	911 aa	Known RBP	6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	GOLGA8H	P0CJ92	632 aa		6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	TNNT1	P13805	278 aa		6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	CD44	P16070	742 aa	Known RBP	6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	TFAP4	Q01664	338 aa		6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	TPD52L1	Q16890	204 aa	Predicted RBP	6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	TMTC3	Q6ZXV5	915 aa		6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	MAPKAPK5	Q8IW41	473 aa		6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	TGFBRAP1	Q8WUH2	860 aa		6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	DHX58	Q96C10	678 aa		6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	MXD3	Q9BW11	206 aa		6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	MKRN1	Q9UHC7	482 aa	Known RBP	6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369		V9GYY5	206 aa	Predicted RBP	6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	ANKRD31	Q8N7Z5	1873 aa		6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	DPYD	Q12882	1025 aa		6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	SAFB	Q15424	915 aa	Known RBP eCLIP	6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	TRAPPC3L	Q5T215	181 aa		6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	E4F1	Q66K89	784 aa	Predicted RBP	6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	CATIP	Q7Z7H3	387 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms