RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 NEDD1Q8NHV4 660 aa8.5□□□□□ -1.05
HMBOX1-214ENST00000560357 L3MBTL3Q96JM7 780 aaPredicted RBP8.5□□□□□ -1.05
HMBOX1-214ENST00000560357 UBAC1Q9BSL1 405 aa8.5□□□□□ -1.05
HMBOX1-214ENST00000560357 TMEM39BQ9GZU3 492 aa8.5□□□□□ -1.05
HMBOX1-214ENST00000560357 DNAJC18Q9H819 358 aa8.5□□□□□ -1.05
HMBOX1-214ENST00000560357 IL17RBQ9NRM6 502 aa8.5□□□□□ -1.05
HMBOX1-214ENST00000560357 TCP11L1Q9NUJ3 509 aa8.5□□□□□ -1.05
HMBOX1-214ENST00000560357 HACL1Q9UJ83 578 aa8.5□□□□□ -1.05
HMBOX1-214ENST00000560357 HPS5Q9UPZ3 1129 aa8.5□□□□□ -1.05
HMBOX1-214ENST00000560357 MYH8P13535 1937 aa8.5□□□□□ -1.05
HMBOX1-214ENST00000560357 TNKSO95271 1327 aa8.5□□□□□ -1.05
HMBOX1-214ENST00000560357 ERICH2A1L162 156 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 GLTPD2A6NH11 291 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 CCDC69A6NI79 296 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 NMT2O60551 498 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 TSPY3P0CV98 308 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 TSPY8P0CW00 308 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 LMOD1P29536 600 aaPredicted RBP8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 TNNI2P48788 182 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 MAP3K10Q02779 954 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 SCRN1Q12765 414 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 PDAP1Q13442 181 aaKnown RBP8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 RASA3Q14644 834 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 WTAPQ15007 396 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 CCDC178Q5BJE1 867 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 RCSD1Q6JBY9 416 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 TATDN1Q6P1N9 297 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 CDAN1Q8IWY9 1227 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 CRACR2BQ8N4Y2 399 aaPredicted RBP8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 ANKS1AQ92625 1134 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 GTF3C6Q969F1 213 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 CCDC17Q96LX7 622 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 CSRNP1Q96S65 589 aa8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 SLKQ9H2G2 1235 aaPredicted RBP8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 CWC22Q9HCG8 908 aaKnown RBP8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 ADARB2Q9NS39 739 aaKnown RBP8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.49□□□□□ -1.05
HMBOX1-214ENST00000560357 POLR2AP24928 1970 aaKnown RBP8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 IGKV6D-41A0A0C4DH26 115 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 POTEMA6NI47 508 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 FAM196BA6NMK8 535 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 GOLGA8BA8MQT2 603 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 ZBTB43O43298 467 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 TBC1D12O60347 775 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 AKR1B1P15121 316 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 NOVP48745 357 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 CCT2P78371 535 aaKnown RBP8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 TNFAIP1Q13829 316 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 IFIT1BQ5T764 474 aaKnown RBP8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 ANGEL2Q5VTE6 544 aaKnown RBP8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 NFXL1Q6ZNB6 911 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 DGKHQ86XP1 1220 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 RAB11FIP4Q86YS3 637 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 CHMP4CQ96CF2 233 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 TEPSINQ96N21 525 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 TRIM34Q9BYJ4 488 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.48□□□□□ -1.051e-20■■■■■ 55.6
HMBOX1-214ENST00000560357 NCOA5Q9HCD5 579 aaKnown RBP8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 HERC5Q9UII4 1024 aaKnown RBP8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 NAP1L2Q9ULW6 460 aaPredicted RBP8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 SCAF8Q9UPN6 1271 aaKnown RBP8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 SLC12A7Q9Y666 1083 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 PLIN4Q96Q06 1357 aa8.48□□□□□ -1.05
HMBOX1-214ENST00000560357 GREB1LQ9C091 1923 aaPredicted RBP8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 POTECB2RU33 542 aa8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 DTNBO60941 627 aa8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 CTDNEP1O95476 244 aa8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 RXRAP19793 462 aa8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 RCAN1P53805 252 aa8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 RRP1BQ14684 758 aaKnown RBP8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 CERKLQ49MI3 558 aaPredicted RBP8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 LCE2DQ5TA82 110 aaPredicted RBP8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 POTEGQ6S5H5 508 aa8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 SYNE3Q6ZMZ3 975 aa8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 APOBEC3FQ8IUX4 373 aaKnown RBP8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 ZNF654Q8IZM8 581 aa8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 NSUN7Q8NE18 718 aaKnown RBP8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 CEP95Q96GE4 821 aa8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 LLPHQ9BRT6 129 aaKnown RBP8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 MYL10Q9BUA6 226 aa8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 DEFB129Q9H1M3 183 aa8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 FAM217BQ9NTX9 383 aaPredicted RBP8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 MTMR4Q9NYA4 1195 aa8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 GGA3Q9NZ52 723 aa8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 SMC3Q9UQE7 1217 aa8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 PITPNM2Q9BZ72 1349 aa8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 NID2Q14112 1375 aa8.47□□□□□ -1.05
HMBOX1-214ENST00000560357 SCN4AP35499 1836 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 GOLGA8AA7E2F4 631 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 DHX16O60231 1041 aaKnown RBP8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 JAK2O60674 1132 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 DDAH1O94760 285 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 TOP1P11387 765 aaKnown RBP8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 GJB2P29033 226 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 CDC27P30260 824 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 GUCY1A2P33402 732 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 EPHX2P34913 555 aa8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 ADD1P35611 737 aaKnown RBP8.46□□□□□ -1.06
HMBOX1-214ENST00000560357 METAP2P50579 478 aaKnown RBP eCLIP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms