RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 CCNA1P78396 465 aa20.41■□□□□ 0.86
HERC1-207ENST00000560316 ATP2B2Q01814 1243 aa20.41■□□□□ 0.86
HERC1-207ENST00000560316 LTBP2Q14767 1821 aa20.41■□□□□ 0.86
HERC1-207ENST00000560316 USP17L15C9J2P7 530 aa20.4■□□□□ 0.86
HERC1-207ENST00000560316 USP17L13C9JLJ4 530 aa20.4■□□□□ 0.86
HERC1-207ENST00000560316 USP17L11C9JVI0 530 aa20.4■□□□□ 0.86
HERC1-207ENST00000560316 USP17L18D6R9N7 530 aa20.4■□□□□ 0.86
HERC1-207ENST00000560316 USP17L22D6RA61 530 aa20.4■□□□□ 0.86
HERC1-207ENST00000560316 USP17L17D6RBQ6 530 aa20.4■□□□□ 0.86
HERC1-207ENST00000560316 USP17L19D6RCP7 530 aa20.4■□□□□ 0.86
HERC1-207ENST00000560316 USP17L20D6RJB6 530 aa20.4■□□□□ 0.86
HERC1-207ENST00000560316 MSCO60682 206 aa20.4■□□□□ 0.86
HERC1-207ENST00000560316 UQCRFS1P1P0C7P4 283 aa20.4■□□□□ 0.86
HERC1-207ENST00000560316 USP17L24Q0WX57 530 aa20.4■□□□□ 0.86
HERC1-207ENST00000560316 GJC2Q5T442 439 aaPredicted RBP20.4■□□□□ 0.86
HERC1-207ENST00000560316 MYLIPQ8WY64 445 aa20.4■□□□□ 0.86
HERC1-207ENST00000560316 FEZ1Q99689 392 aa20.4■□□□□ 0.86
HERC1-207ENST00000560316 PRDM6Q9NQX0 595 aa20.4■□□□□ 0.86
HERC1-207ENST00000560316 PRDM5Q9NQX1 630 aaPredicted RBP20.4■□□□□ 0.86
HERC1-207ENST00000560316 CDK5RAP2Q96SN8 1893 aa20.39■□□□□ 0.86
HERC1-207ENST00000560316 MTX1Q13505 466 aa20.39■□□□□ 0.85
HERC1-207ENST00000560316 C12orf42Q96LP6 360 aa20.39■□□□□ 0.85
HERC1-207ENST00000560316 TTYH1Q9H313 450 aaPredicted RBP20.39■□□□□ 0.85
HERC1-207ENST00000560316 BTBD7Q9P203 1132 aa20.39■□□□□ 0.85
HERC1-207ENST00000560316 IVNS1ABPQ9Y6Y0 642 aa20.39■□□□□ 0.85
HERC1-207ENST00000560316 HLA-DOAP06340 250 aa20.38■□□□□ 0.85
HERC1-207ENST00000560316 HOXC6P09630 235 aa20.38■□□□□ 0.85
HERC1-207ENST00000560316 GRB14Q14449 540 aa20.38■□□□□ 0.85
HERC1-207ENST00000560316 ANO1Q5XXA6 986 aa20.38■□□□□ 0.85
HERC1-207ENST00000560316 CATSPERGQ6ZRH7 1159 aa20.38■□□□□ 0.85
HERC1-207ENST00000560316 BADQ92934 168 aa20.38■□□□□ 0.85
HERC1-207ENST00000560316 FOCADQ5VW36 1801 aa20.37■□□□□ 0.85
HERC1-207ENST00000560316 GNAI3P08754 354 aa20.37■□□□□ 0.85
HERC1-207ENST00000560316 CYBAP13498 195 aa20.37■□□□□ 0.85
HERC1-207ENST00000560316 DYNLL1P63167 89 aaKnown RBP20.37■□□□□ 0.85
HERC1-207ENST00000560316 SLC39A5Q6ZMH5 540 aa20.37■□□□□ 0.85
HERC1-207ENST00000560316 CYP2E1P05181 493 aaPredicted RBP20.36■□□□□ 0.85
HERC1-207ENST00000560316 VCAM1P19320 739 aa20.36■□□□□ 0.85
HERC1-207ENST00000560316 G3BP1Q13283 466 aaKnown RBP eCLIP20.36■□□□□ 0.85
HERC1-207ENST00000560316 RAB3GAP1Q15042 981 aa20.36■□□□□ 0.85
HERC1-207ENST00000560316 TRIM60Q495X7 471 aa20.36■□□□□ 0.85
HERC1-207ENST00000560316 TTC39AQ5SRH9 613 aa20.36■□□□□ 0.85
HERC1-207ENST00000560316 ATF7IPQ6VMQ6 1270 aa20.36■□□□□ 0.85
HERC1-207ENST00000560316 ACER1Q8TDN7 264 aa20.36■□□□□ 0.85
HERC1-207ENST00000560316 CDH23Q9H251 3354 aa20.36■□□□□ 0.85
HERC1-207ENST00000560316 RLFQ13129 1914 aa20.35■□□□□ 0.85
HERC1-207ENST00000560316 IGHA2P01877 340 aa20.35■□□□□ 0.85
HERC1-207ENST00000560316 MYCNP04198 464 aaPredicted RBP20.35■□□□□ 0.85
HERC1-207ENST00000560316 SMAD3P84022 425 aaKnown RBP20.35■□□□□ 0.85
HERC1-207ENST00000560316 SH3RF1Q7Z6J0 888 aa20.35■□□□□ 0.85
HERC1-207ENST00000560316 ARRDC4Q8NCT1 418 aa20.35■□□□□ 0.85
HERC1-207ENST00000560316 PNMA6EA0A0J9YXQ4 647 aa20.34■□□□□ 0.85
HERC1-207ENST00000560316 SPDYE16A6NNV3 312 aaPredicted RBP20.34■□□□□ 0.85
HERC1-207ENST00000560316 KBTBD13C9JR72 458 aa20.34■□□□□ 0.85
HERC1-207ENST00000560316 FOSL2P15408 326 aa20.34■□□□□ 0.85
HERC1-207ENST00000560316 USP14P54578 494 aa20.34■□□□□ 0.85
HERC1-207ENST00000560316 TATDN1Q6P1N9 297 aa20.34■□□□□ 0.85
HERC1-207ENST00000560316 LBX2Q6XYB7 198 aa20.34■□□□□ 0.85
HERC1-207ENST00000560316 DPP9Q86TI2 863 aa20.34■□□□□ 0.85
HERC1-207ENST00000560316 KIAA1683Q9H0B3 1180 aa20.34■□□□□ 0.85
HERC1-207ENST00000560316 RPAP3Q9H6T3 665 aaPredicted RBP20.34■□□□□ 0.85
HERC1-207ENST00000560316 PDLIM7Q9NR12 457 aa20.34■□□□□ 0.85
HERC1-207ENST00000560316 TRIM43BA6NCK2 446 aa20.33■□□□□ 0.85
HERC1-207ENST00000560316 TRIM43Q96BQ3 446 aaPredicted RBP20.33■□□□□ 0.85
HERC1-207ENST00000560316 DBNDD2Q9BQY9 259 aa20.33■□□□□ 0.85
HERC1-207ENST00000560316 PIH1D3Q9NQM4 214 aaKnown RBP20.33■□□□□ 0.85
HERC1-207ENST00000560316 MYO5AQ9Y4I1 1855 aaKnown RBP20.33■□□□□ 0.84
HERC1-207ENST00000560316 TTC28Q96AY4 2481 aa20.32■□□□□ 0.84
HERC1-207ENST00000560316 CYP7A1P22680 504 aa20.32■□□□□ 0.84
HERC1-207ENST00000560316 ADORA2AP29274 412 aa20.32■□□□□ 0.84
HERC1-207ENST00000560316 ZAP70P43403 619 aa20.32■□□□□ 0.84
HERC1-207ENST00000560316 SNX17Q15036 470 aa20.32■□□□□ 0.84
HERC1-207ENST00000560316 CERKLQ49MI3 558 aaPredicted RBP20.32■□□□□ 0.84
HERC1-207ENST00000560316 CCDC158Q5M9N0 1113 aa20.32■□□□□ 0.84
HERC1-207ENST00000560316 TRMT2AQ8IZ69 625 aaKnown RBP20.32■□□□□ 0.84
HERC1-207ENST00000560316 MIGA1Q8NAN2 632 aa20.32■□□□□ 0.84
HERC1-207ENST00000560316 FERMT2Q96AC1 680 aa20.32■□□□□ 0.84
HERC1-207ENST00000560316 ADCYAP1R1P41586 468 aa20.31■□□□□ 0.84
HERC1-207ENST00000560316 USP5P45974 858 aa20.31■□□□□ 0.84
HERC1-207ENST00000560316 ABCB5Q2M3G0 1257 aa20.31■□□□□ 0.84
HERC1-207ENST00000560316 TNNI3KQ59H18 835 aa20.31■□□□□ 0.84
HERC1-207ENST00000560316 PRAMEF19Q5SWL8 479 aa20.31■□□□□ 0.84
HERC1-207ENST00000560316 OLFML2BQ68BL8 750 aa20.31■□□□□ 0.84
HERC1-207ENST00000560316 MOV10L1Q9BXT6 1211 aaKnown RBP20.31■□□□□ 0.84
HERC1-207ENST00000560316 SERPINB13Q9UIV8 391 aa20.31■□□□□ 0.84
HERC1-207ENST00000560316 FPGT-TNNI3KV9GXZ4 949 aa20.31■□□□□ 0.84
HERC1-207ENST00000560316 MYH1P12882 1939 aa20.3■□□□□ 0.84
HERC1-207ENST00000560316 SEPT4O43236 478 aa20.3■□□□□ 0.84
HERC1-207ENST00000560316 GNAI2P04899 355 aa20.3■□□□□ 0.84
HERC1-207ENST00000560316 CT47B1P0C2W7 299 aaPredicted RBP20.3■□□□□ 0.84
HERC1-207ENST00000560316 COBLO75128 1261 aa20.29■□□□□ 0.84
HERC1-207ENST00000560316 ITGB8P26012 769 aa20.29■□□□□ 0.84
HERC1-207ENST00000560316 GUCY1A2P33402 732 aa20.29■□□□□ 0.84
HERC1-207ENST00000560316 LRRC41Q15345 812 aa20.29■□□□□ 0.84
HERC1-207ENST00000560316 SYMPKQ92797 1274 aaKnown RBP20.29■□□□□ 0.84
HERC1-207ENST00000560316 EHD4Q9H223 541 aa20.29■□□□□ 0.84
HERC1-207ENST00000560316 CABP5Q9NP86 173 aa20.29■□□□□ 0.84
HERC1-207ENST00000560316 ERCC3P19447 782 aa20.28■□□□□ 0.84
HERC1-207ENST00000560316 SHMT1P34896 483 aa20.28■□□□□ 0.84
HERC1-207ENST00000560316 RARSP54136 660 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms