RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 DNM1Q05193 864 aaKnown RBP16.81■□□□□ 0.28
ZEB1-218ENST00000560196 FERMT3Q86UX7 667 aa16.81■□□□□ 0.28
ZEB1-218ENST00000560196 PNMA1Q8ND90 353 aa16.81■□□□□ 0.28
ZEB1-218ENST00000560196 PHKBQ93100 1093 aa16.81■□□□□ 0.28
ZEB1-218ENST00000560196 SLC26A6Q9BXS9 759 aa16.81■□□□□ 0.28
ZEB1-218ENST00000560196 ELP1O95163 1332 aa16.8■□□□□ 0.28
ZEB1-218ENST00000560196 FZD9O00144 591 aa16.8■□□□□ 0.28
ZEB1-218ENST00000560196 PRPF3O43395 683 aaKnown RBP16.8■□□□□ 0.28
ZEB1-218ENST00000560196 TOP1P11387 765 aaKnown RBP16.8■□□□□ 0.28
ZEB1-218ENST00000560196 GNAQP50148 359 aa16.8■□□□□ 0.28
ZEB1-218ENST00000560196 GRM4Q14833 912 aa16.8■□□□□ 0.28
ZEB1-218ENST00000560196 SPDYE2Q495Y8 402 aa16.8■□□□□ 0.28
ZEB1-218ENST00000560196 SH3BP5LQ7L8J4 393 aa16.8■□□□□ 0.28
ZEB1-218ENST00000560196 BRAPQ7Z569 592 aa16.8■□□□□ 0.28
ZEB1-218ENST00000560196 USP48Q86UV5 1035 aa16.8■□□□□ 0.28
ZEB1-218ENST00000560196 ZFPM1Q8IX07 1006 aa16.8■□□□□ 0.28
ZEB1-218ENST00000560196 TMEM47Q9BQJ4 181 aa16.8■□□□□ 0.28
ZEB1-218ENST00000560196 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.8■□□□□ 0.28
ZEB1-218ENST00000560196 SCAND2PQ9GZW5 306 aaPredicted RBP16.8■□□□□ 0.28
ZEB1-218ENST00000560196 RBM27Q9P2N5 1060 aaKnown RBP16.8■□□□□ 0.28
ZEB1-218ENST00000560196 ZNF70Q9UC06 446 aaPredicted RBP16.8■□□□□ 0.28
ZEB1-218ENST00000560196 CNPY2Q9Y2B0 182 aa16.8■□□□□ 0.28
ZEB1-218ENST00000560196 ZBTB12Q9Y330 459 aaPredicted RBP16.8■□□□□ 0.28
ZEB1-218ENST00000560196 DDX49Q9Y6V7 483 aaKnown RBP16.8■□□□□ 0.28
ZEB1-218ENST00000560196 DDTLA6NHG4 134 aaPredicted RBP16.79■□□□□ 0.28
ZEB1-218ENST00000560196 ZNF280AP59817 542 aaPredicted RBP16.79■□□□□ 0.28
ZEB1-218ENST00000560196 MTMR4Q9NYA4 1195 aa16.79■□□□□ 0.28
ZEB1-218ENST00000560196 SIPA1L1O43166 1804 aa16.79■□□□□ 0.28
ZEB1-218ENST00000560196 PPFIA3O75145 1194 aa16.78■□□□□ 0.28
ZEB1-218ENST00000560196 AKR1B1P15121 316 aa16.78■□□□□ 0.28
ZEB1-218ENST00000560196 CACNB3P54284 484 aa16.78■□□□□ 0.28
ZEB1-218ENST00000560196 EIF6P56537 245 aaKnown RBP16.78■□□□□ 0.28
ZEB1-218ENST00000560196 AKAP17AQ02040 695 aaKnown RBP16.78■□□□□ 0.28
ZEB1-218ENST00000560196 RASSF7Q02833 373 aa16.78■□□□□ 0.28
ZEB1-218ENST00000560196 TRIM29Q14134 588 aa16.78■□□□□ 0.28
ZEB1-218ENST00000560196 FOXD4L6Q3SYB3 417 aaPredicted RBP16.78■□□□□ 0.28
ZEB1-218ENST00000560196 KRT40Q6A162 431 aa16.78■□□□□ 0.28
ZEB1-218ENST00000560196 TATDN1Q6P1N9 297 aa16.78■□□□□ 0.28
ZEB1-218ENST00000560196 FOXD4L3Q6VB84 417 aaPredicted RBP16.78■□□□□ 0.28
ZEB1-218ENST00000560196 FAM151AQ8WW52 585 aa16.78■□□□□ 0.28
ZEB1-218ENST00000560196 DPF2Q92785 391 aa16.78■□□□□ 0.28
ZEB1-218ENST00000560196 CEP95Q96GE4 821 aa16.78■□□□□ 0.28
ZEB1-218ENST00000560196 ZNF396Q96N95 335 aaPredicted RBP16.78■□□□□ 0.28
ZEB1-218ENST00000560196 LZTS2Q9BRK4 669 aa16.78■□□□□ 0.28
ZEB1-218ENST00000560196 CFAP45Q9UL16 551 aa16.78■□□□□ 0.28
ZEB1-218ENST00000560196 GREB1LQ9C091 1923 aaPredicted RBP16.78■□□□□ 0.28
ZEB1-218ENST00000560196 CNTNAP5Q8WYK1 1306 aa16.77■□□□□ 0.28
ZEB1-218ENST00000560196 PLEKHA8P1O95397 391 aa16.77■□□□□ 0.28
ZEB1-218ENST00000560196 NCLP19338 710 aaKnown RBP16.77■□□□□ 0.28
ZEB1-218ENST00000560196 SMARCA1P28370 1054 aa16.77■□□□□ 0.28
ZEB1-218ENST00000560196 FOSBP53539 338 aa16.77■□□□□ 0.28
ZEB1-218ENST00000560196 UBE2HP62256 183 aa16.77■□□□□ 0.28
ZEB1-218ENST00000560196 GUCY1B3Q02153 619 aa16.77■□□□□ 0.28
ZEB1-218ENST00000560196 KIF23Q02241 960 aaPredicted RBP16.77■□□□□ 0.28
ZEB1-218ENST00000560196 TCP10Q12799 353 aa16.77■□□□□ 0.28
ZEB1-218ENST00000560196 FAM83AQ86UY5 434 aa16.77■□□□□ 0.28
ZEB1-218ENST00000560196 AIFM3Q96NN9 605 aa16.77■□□□□ 0.28
ZEB1-218ENST00000560196 DNAJC18Q9H819 358 aa16.77■□□□□ 0.28
ZEB1-218ENST00000560196 PALM3A6NDB9 673 aaPredicted RBP16.76■□□□□ 0.27
ZEB1-218ENST00000560196 FIBPO43427 364 aa16.76■□□□□ 0.27
ZEB1-218ENST00000560196 MYO1BO43795 1136 aa16.76■□□□□ 0.27
ZEB1-218ENST00000560196 XBP1P17861 261 aa16.76■□□□□ 0.27
ZEB1-218ENST00000560196 PRELPP51888 382 aa16.76■□□□□ 0.27
ZEB1-218ENST00000560196 PKN1Q16512 942 aa16.76■□□□□ 0.27
ZEB1-218ENST00000560196 OTUD7BQ6GQQ9 843 aa16.76■□□□□ 0.27
ZEB1-218ENST00000560196 ZSCAN29Q8IWY8 852 aaPredicted RBP16.76■□□□□ 0.27
ZEB1-218ENST00000560196 FAM177A1Q8N128 213 aaPredicted RBP16.76■□□□□ 0.27
ZEB1-218ENST00000560196 SRBD1Q8N5C6 995 aaKnown RBP16.76■□□□□ 0.27
ZEB1-218ENST00000560196 GPT2Q8TD30 523 aa16.76■□□□□ 0.27
ZEB1-218ENST00000560196 GDPD2Q9HCC8 539 aa16.76■□□□□ 0.27
ZEB1-218ENST00000560196 MAD2L2Q9UI95 211 aa16.76■□□□□ 0.27
ZEB1-218ENST00000560196 HERC5Q9UII4 1024 aaKnown RBP16.76■□□□□ 0.27
ZEB1-218ENST00000560196 STX8Q9UNK0 236 aa16.76■□□□□ 0.27
ZEB1-218ENST00000560196 TCHHQ07283 1943 aa16.76■□□□□ 0.27
ZEB1-218ENST00000560196 TTLL1O95922 423 aa16.75■□□□□ 0.27
ZEB1-218ENST00000560196 U2AF2P26368 475 aaKnown RBP eCLIP16.75■□□□□ 0.277e-7■■■■■ 29.9
ZEB1-218ENST00000560196 GUCY1A2P33402 732 aa16.75■□□□□ 0.27
ZEB1-218ENST00000560196 GSE1Q14687 1217 aa16.75■□□□□ 0.27
ZEB1-218ENST00000560196 FAM173BQ6P4H8 233 aa16.75■□□□□ 0.27
ZEB1-218ENST00000560196 TRIM34Q9BYJ4 488 aa16.75■□□□□ 0.27
ZEB1-218ENST00000560196 MYOZ2Q9NPC6 264 aa16.75■□□□□ 0.27
ZEB1-218ENST00000560196 RCOR1Q9UKL0 485 aa16.75■□□□□ 0.27
ZEB1-218ENST00000560196 CNTNAP1P78357 1384 aa16.75■□□□□ 0.27
ZEB1-218ENST00000560196 MYH8P13535 1937 aa16.74■□□□□ 0.27
ZEB1-218ENST00000560196 MMP1P03956 469 aa16.74■□□□□ 0.27
ZEB1-218ENST00000560196 SAFBQ15424 915 aaKnown RBP eCLIP16.74■□□□□ 0.27
ZEB1-218ENST00000560196 CERKLQ49MI3 558 aaPredicted RBP16.74■□□□□ 0.27
ZEB1-218ENST00000560196 CMTR1Q8N1G2 835 aaKnown RBP16.74■□□□□ 0.27
ZEB1-218ENST00000560196 LEO1Q8WVC0 666 aaPredicted RBP16.74■□□□□ 0.27
ZEB1-218ENST00000560196 SPATA32Q96LK8 384 aa16.74■□□□□ 0.27
ZEB1-218ENST00000560196 SPZ1Q9BXG8 430 aa16.74■□□□□ 0.27
ZEB1-218ENST00000560196 FHDC1Q9C0D6 1143 aaPredicted RBP16.74■□□□□ 0.27
ZEB1-218ENST00000560196 NYAP2Q9P242 653 aa16.74■□□□□ 0.27
ZEB1-218ENST00000560196 V9GY48 417 aaPredicted RBP16.74■□□□□ 0.27
ZEB1-218ENST00000560196 MYH15Q9Y2K3 1946 aa16.74■□□□□ 0.27
ZEB1-218ENST00000560196 CLRN2A0PK11 232 aa16.73■□□□□ 0.27
ZEB1-218ENST00000560196 TCP10L2B9ZVM9 353 aa16.73■□□□□ 0.27
ZEB1-218ENST00000560196 WNT10BO00744 389 aa16.73■□□□□ 0.27
ZEB1-218ENST00000560196 TBC1D12O60347 775 aa16.73■□□□□ 0.27
ZEB1-218ENST00000560196 GADD45BO75293 160 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms