RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 RASA1P20936 1047 aa10.18□□□□□ -0.78
USP3-217ENST00000560070 TFAP4Q01664 338 aa10.18□□□□□ -0.78
USP3-217ENST00000560070 ALX1Q15699 326 aa10.18□□□□□ -0.78
USP3-217ENST00000560070 SIAH1Q8IUQ4 282 aa10.18□□□□□ -0.78
USP3-217ENST00000560070 CCDC17Q96LX7 622 aa10.18□□□□□ -0.78
USP3-217ENST00000560070 EMILIN3Q9NT22 766 aa10.18□□□□□ -0.78
USP3-217ENST00000560070 GINM1Q9NU53 330 aa10.18□□□□□ -0.78
USP3-217ENST00000560070 CLIP2Q9UDT6 1046 aa10.18□□□□□ -0.78
USP3-217ENST00000560070 C19orf81C9J6K1 198 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 RANBP6O60518 1105 aaKnown RBP10.17□□□□□ -0.78
USP3-217ENST00000560070 PEX10O60683 326 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 EEF2P13639 858 aaKnown RBP10.17□□□□□ -0.78
USP3-217ENST00000560070 OSBPP22059 807 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 PTH1RQ03431 593 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 ICA1Q05084 483 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 PDE4BQ07343 736 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 SH3D19Q5HYK7 790 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 ERICH6BQ5W0A0 696 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 USP17L2Q6R6M4 530 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 TMEM179Q6ZVK1 233 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 TICAM2Q86XR7 235 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 TNS4Q8IZW8 715 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 SPICE1Q8N0Z3 855 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 CD99L2Q8TCZ2 262 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 RUFY2Q8WXA3 655 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 P2RX7Q99572 595 aaKnown RBP10.17□□□□□ -0.78
USP3-217ENST00000560070 TBC1D2Q9BYX2 928 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 ZNF287Q9HBT7 754 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 AGTPBP1Q9UPW5 1226 aa10.17□□□□□ -0.78
USP3-217ENST00000560070 ZNF213O14771 459 aa10.16□□□□□ -0.78
USP3-217ENST00000560070 TLR2O60603 784 aa10.16□□□□□ -0.78
USP3-217ENST00000560070 TSPY3P0CV98 308 aa10.16□□□□□ -0.78
USP3-217ENST00000560070 TSPY8P0CW00 308 aa10.16□□□□□ -0.78
USP3-217ENST00000560070 FXR2P51116 673 aaKnown RBP eCLIP10.16□□□□□ -0.78
USP3-217ENST00000560070 SP3Q02447 781 aa10.16□□□□□ -0.78
USP3-217ENST00000560070 KIAA1755Q5JYT7 1200 aa10.16□□□□□ -0.78
USP3-217ENST00000560070 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.16□□□□□ -0.78
USP3-217ENST00000560070 ARHGEF10LQ9HCE6 1279 aa10.16□□□□□ -0.78
USP3-217ENST00000560070 MTMR7Q9Y216 660 aa10.16□□□□□ -0.78
USP3-217ENST00000560070 MYH2Q9UKX2 1941 aa10.15□□□□□ -0.78
USP3-217ENST00000560070 MYH13Q9UKX3 1938 aa10.15□□□□□ -0.78
USP3-217ENST00000560070 TSPY2A6NKD2 308 aa10.15□□□□□ -0.78
USP3-217ENST00000560070 NMT2O60551 498 aa10.15□□□□□ -0.78
USP3-217ENST00000560070 IRX3P78415 501 aaPredicted RBP10.15□□□□□ -0.78
USP3-217ENST00000560070 PABPC4Q13310 644 aaKnown RBP eCLIP10.15□□□□□ -0.78
USP3-217ENST00000560070 ANKRD13CQ8N6S4 541 aa10.15□□□□□ -0.78
USP3-217ENST00000560070 PROCA1Q8NCQ7 364 aaPredicted RBP10.15□□□□□ -0.78
USP3-217ENST00000560070 SMCR8Q8TEV9 937 aaPredicted RBP10.15□□□□□ -0.78
USP3-217ENST00000560070 PARK7Q99497 189 aaKnown RBP10.15□□□□□ -0.78
USP3-217ENST00000560070 ARHGAP39Q9C0H5 1083 aa10.15□□□□□ -0.78
USP3-217ENST00000560070 KIAA1683Q9H0B3 1180 aa10.15□□□□□ -0.78
USP3-217ENST00000560070 ASCC2Q9H1I8 757 aaPredicted RBP10.15□□□□□ -0.78
USP3-217ENST00000560070 RPAP3Q9H6T3 665 aaPredicted RBP10.15□□□□□ -0.78
USP3-217ENST00000560070 KANSL2Q9H9L4 492 aa10.15□□□□□ -0.78
USP3-217ENST00000560070 TRPM7Q96QT4 1865 aa10.15□□□□□ -0.79
USP3-217ENST00000560070 USP17L15C9J2P7 530 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 USP17L13C9JLJ4 530 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 USP17L11C9JVI0 530 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 USP17L18D6R9N7 530 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 USP17L22D6RA61 530 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 USP17L17D6RBQ6 530 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 USP17L19D6RCP7 530 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 USP17L20D6RJB6 530 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 SGSM2O43147 1006 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 FMNL1O95466 1100 aaPredicted RBP10.14□□□□□ -0.79
USP3-217ENST00000560070 USP14P54578 494 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 CAP1Q01518 475 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 USP17L24Q0WX57 530 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 C17orf99Q6UX52 265 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 MFSD6Q6ZSS7 791 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 KIAA1211Q6ZU35 1233 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 TBC1D10CQ8IV04 446 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 NEDD1Q8NHV4 660 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 NKX2-3Q8TAU0 364 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 CEP95Q96GE4 821 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 NUP88Q99567 741 aaPredicted RBP10.14□□□□□ -0.79
USP3-217ENST00000560070 PAGR1Q9BTK6 254 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 DSCC1Q9BVC3 393 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 CFHR5Q9BXR6 569 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 MCOLN1Q9GZU1 580 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 CTNNA3Q9UI47 895 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 ANAPC4Q9UJX5 808 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 ISY1Q9ULR0 285 aaKnown RBP10.14□□□□□ -0.79
USP3-217ENST00000560070 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.14□□□□□ -0.79
USP3-217ENST00000560070 TMX2Q9Y320 296 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 TRIM17Q9Y577 477 aa10.14□□□□□ -0.79
USP3-217ENST00000560070 VCAM1P19320 739 aa10.13□□□□□ -0.79
USP3-217ENST00000560070 PSMC4P43686 418 aa10.13□□□□□ -0.79
USP3-217ENST00000560070 KIF22Q14807 665 aa10.13□□□□□ -0.79
USP3-217ENST00000560070 IMMTQ16891 758 aaKnown RBP10.13□□□□□ -0.79
USP3-217ENST00000560070 BMP2KLQ5H9B9 411 aa10.13□□□□□ -0.79
USP3-217ENST00000560070 AKNAD1Q5T1N1 836 aa10.13□□□□□ -0.79
USP3-217ENST00000560070 CATSPERGQ6ZRH7 1159 aa10.13□□□□□ -0.79
USP3-217ENST00000560070 CTU1Q7Z7A3 348 aaKnown RBP10.13□□□□□ -0.79
USP3-217ENST00000560070 LRRC47Q8N1G4 583 aaKnown RBP10.13□□□□□ -0.79
USP3-217ENST00000560070 ERO1AQ96HE7 468 aa10.13□□□□□ -0.79
USP3-217ENST00000560070 ZKSCAN3Q9BRR0 538 aa10.13□□□□□ -0.79
USP3-217ENST00000560070 ESYT1Q9BSJ8 1104 aa10.13□□□□□ -0.79
USP3-217ENST00000560070 TANGO6Q9C0B7 1094 aa10.13□□□□□ -0.79
USP3-217ENST00000560070 NBPF3Q9H094 633 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms