RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 C1orf115Q9H7X2 142 aa24.9■■□□□ 1.58
PSEN1-225ENST00000560005 AATFQ9NY61 560 aaKnown RBP eCLIP24.9■■□□□ 1.58
PSEN1-225ENST00000560005 LRP2BPQ9P2M1 347 aa24.9■■□□□ 1.58
PSEN1-225ENST00000560005 ZBTB21Q9ULJ3 1066 aa24.9■■□□□ 1.58
PSEN1-225ENST00000560005 ARID4AP29374 1257 aaPredicted RBP24.89■■□□□ 1.58
PSEN1-225ENST00000560005 ATN1P54259 1190 aaPredicted RBP24.89■■□□□ 1.58
PSEN1-225ENST00000560005 MAP2K5Q13163 448 aa24.89■■□□□ 1.58
PSEN1-225ENST00000560005 ZNF697Q5TEC3 545 aa24.89■■□□□ 1.58
PSEN1-225ENST00000560005 CEP85Q6P2H3 762 aa24.89■■□□□ 1.58
PSEN1-225ENST00000560005 MAPKAPK5Q8IW41 473 aa24.89■■□□□ 1.58
PSEN1-225ENST00000560005 TRIM34Q9BYJ4 488 aa24.89■■□□□ 1.58
PSEN1-225ENST00000560005 EMILIN3Q9NT22 766 aa24.89■■□□□ 1.58
PSEN1-225ENST00000560005 CDH23Q9H251 3354 aa24.89■■□□□ 1.57
PSEN1-225ENST00000560005 MCAMP43121 646 aa24.88■■□□□ 1.57
PSEN1-225ENST00000560005 METTL16Q86W50 562 aaKnown RBP24.88■■□□□ 1.57
PSEN1-225ENST00000560005 TGFBRAP1Q8WUH2 860 aa24.88■■□□□ 1.57
PSEN1-225ENST00000560005 EDC3Q96F86 508 aaKnown RBP24.88■■□□□ 1.57
PSEN1-225ENST00000560005 NDUFB9Q9Y6M9 179 aa24.88■■□□□ 1.57
PSEN1-225ENST00000560005 FLT1P17948 1338 aa24.87■■□□□ 1.57
PSEN1-225ENST00000560005 BAG3O95817 575 aa24.87■■□□□ 1.57
PSEN1-225ENST00000560005 ATP8B2P98198 1209 aa24.87■■□□□ 1.57
PSEN1-225ENST00000560005 MFSD14CQ5VZR4 134 aa24.87■■□□□ 1.57
PSEN1-225ENST00000560005 FOXP4Q8IVH2 680 aaPredicted RBP24.87■■□□□ 1.57
PSEN1-225ENST00000560005 GINM1Q9NU53 330 aa24.87■■□□□ 1.57
PSEN1-225ENST00000560005 FLRT1Q9NZU1 646 aa24.87■■□□□ 1.57
PSEN1-225ENST00000560005 NAA16Q6N069 864 aaPredicted RBP24.86■■□□□ 1.57
PSEN1-225ENST00000560005 USP17L2Q6R6M4 530 aa24.86■■□□□ 1.57
PSEN1-225ENST00000560005 DCTPP1Q9H773 170 aa24.86■■□□□ 1.57
PSEN1-225ENST00000560005 PRKAG2Q9UGJ0 569 aa24.86■■□□□ 1.57
PSEN1-225ENST00000560005 DDX20Q9UHI6 824 aaKnown RBP24.86■■□□□ 1.57
PSEN1-225ENST00000560005 PALD1Q9ULE6 856 aa24.86■■□□□ 1.57
PSEN1-225ENST00000560005 PLCG2P16885 1265 aa24.85■■□□□ 1.57
PSEN1-225ENST00000560005 CNGA1P29973 690 aa24.85■■□□□ 1.57
PSEN1-225ENST00000560005 WDR78Q5VTH9 848 aa24.85■■□□□ 1.57
PSEN1-225ENST00000560005 SIRT2Q8IXJ6 389 aa24.85■■□□□ 1.57
PSEN1-225ENST00000560005 ZBTB47Q9UFB7 747 aaPredicted RBP24.85■■□□□ 1.57
PSEN1-225ENST00000560005 RABGAP1Q9Y3P9 1069 aa24.85■■□□□ 1.57
PSEN1-225ENST00000560005 CNMDO75829 334 aa24.84■■□□□ 1.57
PSEN1-225ENST00000560005 GLRX3O76003 335 aaKnown RBP24.84■■□□□ 1.57
PSEN1-225ENST00000560005 CCNA1P78396 465 aa24.84■■□□□ 1.57
PSEN1-225ENST00000560005 LPAR1Q92633 364 aa24.84■■□□□ 1.57
PSEN1-225ENST00000560005 CDX2Q99626 313 aaPredicted RBP24.84■■□□□ 1.57
PSEN1-225ENST00000560005 SAP30BPQ9UHR5 308 aaKnown RBP24.84■■□□□ 1.57
PSEN1-225ENST00000560005 CDK5RAP2Q96SN8 1893 aa24.83■■□□□ 1.57
PSEN1-225ENST00000560005 DNM1LO00429 736 aa24.83■■□□□ 1.57
PSEN1-225ENST00000560005 MSCO60682 206 aa24.83■■□□□ 1.57
PSEN1-225ENST00000560005 UQCRFS1P1P0C7P4 283 aa24.83■■□□□ 1.57
PSEN1-225ENST00000560005 RTP1P59025 263 aa24.83■■□□□ 1.57
PSEN1-225ENST00000560005 PPP4CP60510 307 aa24.83■■□□□ 1.57
PSEN1-225ENST00000560005 MTX1Q13505 466 aa24.83■■□□□ 1.57
PSEN1-225ENST00000560005 ZYXQ15942 572 aaKnown RBP24.83■■□□□ 1.57
PSEN1-225ENST00000560005 ADGRA1Q86SQ6 560 aa24.83■■□□□ 1.57
PSEN1-225ENST00000560005 SNRKQ9NRH2 765 aa24.83■■□□□ 1.57
PSEN1-225ENST00000560005 LTBP2Q14767 1821 aa24.83■■□□□ 1.57
PSEN1-225ENST00000560005 FOCADQ5VW36 1801 aa24.82■■□□□ 1.56
PSEN1-225ENST00000560005 GH2P01242 217 aa24.82■■□□□ 1.56
PSEN1-225ENST00000560005 PTPREP23469 700 aa24.82■■□□□ 1.56
PSEN1-225ENST00000560005 SLC15A5A6NIM6 579 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 USP17L15C9J2P7 530 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 USP17L13C9JLJ4 530 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 USP17L11C9JVI0 530 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 USP17L18D6R9N7 530 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 USP17L22D6RA61 530 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 USP17L17D6RBQ6 530 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 USP17L19D6RCP7 530 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 USP17L20D6RJB6 530 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 CYP2C19P33261 490 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 ATP2B2Q01814 1243 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 USP17L24Q0WX57 530 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 SHHQ15465 462 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 MAFAQ8NHW3 353 aaPredicted RBP24.81■■□□□ 1.56
PSEN1-225ENST00000560005 C12orf42Q96LP6 360 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 FEZ1Q99689 392 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 ATP11BQ9Y2G3 1177 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 TTC28Q96AY4 2481 aa24.81■■□□□ 1.56
PSEN1-225ENST00000560005 HLA-DOAP06340 250 aa24.8■■□□□ 1.56
PSEN1-225ENST00000560005 NUCB1Q02818 461 aa24.8■■□□□ 1.56
PSEN1-225ENST00000560005 C9orf50Q5SZB4 431 aa24.8■■□□□ 1.56
PSEN1-225ENST00000560005 TRPV1Q8NER1 839 aa24.8■■□□□ 1.56
PSEN1-225ENST00000560005 SEMA6BQ9H3T3 888 aa24.8■■□□□ 1.56
PSEN1-225ENST00000560005 HOXC6P09630 235 aa24.79■■□□□ 1.56
PSEN1-225ENST00000560005 GRB14Q14449 540 aa24.79■■□□□ 1.56
PSEN1-225ENST00000560005 GJC2Q5T442 439 aaPredicted RBP24.79■■□□□ 1.56
PSEN1-225ENST00000560005 NPLOC4Q8TAT6 608 aa24.79■■□□□ 1.56
PSEN1-225ENST00000560005 IVNS1ABPQ9Y6Y0 642 aa24.79■■□□□ 1.56
PSEN1-225ENST00000560005 CATSPERGQ6ZRH7 1159 aa24.78■■□□□ 1.56
PSEN1-225ENST00000560005 SSH3Q8TE77 659 aa24.78■■□□□ 1.56
PSEN1-225ENST00000560005 PRDM5Q9NQX1 630 aaPredicted RBP24.78■■□□□ 1.56
PSEN1-225ENST00000560005 BTBD7Q9P203 1132 aa24.78■■□□□ 1.56
PSEN1-225ENST00000560005 G3BP1Q13283 466 aaKnown RBP eCLIP24.77■■□□□ 1.56
PSEN1-225ENST00000560005 HSP90AB4PQ58FF6 505 aa24.77■■□□□ 1.56
PSEN1-225ENST00000560005 TTC39AQ5SRH9 613 aa24.77■■□□□ 1.56
PSEN1-225ENST00000560005 CHD1LQ86WJ1 897 aa24.77■■□□□ 1.56
PSEN1-225ENST00000560005 MYLIPQ8WY64 445 aa24.77■■□□□ 1.56
PSEN1-225ENST00000560005 RLFQ13129 1914 aa24.76■■□□□ 1.55
PSEN1-225ENST00000560005 CYP2E1P05181 493 aaPredicted RBP24.76■■□□□ 1.55
PSEN1-225ENST00000560005 CYBAP13498 195 aa24.76■■□□□ 1.55
PSEN1-225ENST00000560005 VCAM1P19320 739 aa24.76■■□□□ 1.55
PSEN1-225ENST00000560005 DYNLL1P63167 89 aaKnown RBP24.76■■□□□ 1.55
PSEN1-225ENST00000560005 RAB3GAP1Q15042 981 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms