RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 GREB1LQ9C091 1923 aaPredicted RBP17.76■□□□□ 0.43
RABGGTA-211ENST00000559850 C19orf81C9J6K1 198 aa17.76■□□□□ 0.43
RABGGTA-211ENST00000559850 PATL2C9JE40 543 aaKnown RBP17.76■□□□□ 0.43
RABGGTA-211ENST00000559850 FOXP2O15409 715 aa17.76■□□□□ 0.43
RABGGTA-211ENST00000559850 GNAT2P19087 354 aa17.76■□□□□ 0.43
RABGGTA-211ENST00000559850 NMIQ13287 307 aaPredicted RBP17.76■□□□□ 0.43
RABGGTA-211ENST00000559850 SBK1Q52WX2 424 aa17.76■□□□□ 0.43
RABGGTA-211ENST00000559850 VPS53Q5VIR6 699 aa17.76■□□□□ 0.43
RABGGTA-211ENST00000559850 USP17L2Q6R6M4 530 aa17.76■□□□□ 0.43
RABGGTA-211ENST00000559850 ANKRD13CQ8N6S4 541 aa17.76■□□□□ 0.43
RABGGTA-211ENST00000559850 ASCC2Q9H1I8 757 aaPredicted RBP17.76■□□□□ 0.43
RABGGTA-211ENST00000559850 OSBPL3Q9H4L5 887 aa17.76■□□□□ 0.43
RABGGTA-211ENST00000559850 PTPN22Q9Y2R2 807 aa17.76■□□□□ 0.43
RABGGTA-211ENST00000559850 A0A1W2PRG0 241 aa17.75■□□□□ 0.43
RABGGTA-211ENST00000559850 OSBPP22059 807 aa17.75■□□□□ 0.43
RABGGTA-211ENST00000559850 PSMC4P43686 418 aa17.75■□□□□ 0.43
RABGGTA-211ENST00000559850 GIMAP6Q6P9H5 292 aa17.75■□□□□ 0.43
RABGGTA-211ENST00000559850 TRIM47Q96LD4 638 aa17.75■□□□□ 0.43
RABGGTA-211ENST00000559850 PNMA3Q9UL41 463 aa17.75■□□□□ 0.43
RABGGTA-211ENST00000559850 PRDM1O75626 825 aa17.74■□□□□ 0.43
RABGGTA-211ENST00000559850 FMNL1O95466 1100 aaPredicted RBP17.74■□□□□ 0.43
RABGGTA-211ENST00000559850 SOX10P56693 466 aa17.74■□□□□ 0.43
RABGGTA-211ENST00000559850 PABPC4Q13310 644 aaKnown RBP eCLIP17.74■□□□□ 0.43
RABGGTA-211ENST00000559850 KIF22Q14807 665 aa17.74■□□□□ 0.43
RABGGTA-211ENST00000559850 TMEM179Q6ZVK1 233 aa17.74■□□□□ 0.43
RABGGTA-211ENST00000559850 SIAH1Q8IUQ4 282 aa17.74■□□□□ 0.43
RABGGTA-211ENST00000559850 P2RX7Q99572 595 aaKnown RBP17.74■□□□□ 0.43
RABGGTA-211ENST00000559850 PTCH2Q9Y6C5 1203 aa17.74■□□□□ 0.43
RABGGTA-211ENST00000559850 MYH4Q9Y623 1939 aa17.73■□□□□ 0.43
RABGGTA-211ENST00000559850 IRX3P78415 501 aaPredicted RBP17.73■□□□□ 0.43
RABGGTA-211ENST00000559850 ATP2B2Q01814 1243 aa17.73■□□□□ 0.43
RABGGTA-211ENST00000559850 KIAA1755Q5JYT7 1200 aa17.73■□□□□ 0.43
RABGGTA-211ENST00000559850 ZNF589Q86UQ0 364 aaPredicted RBP17.73■□□□□ 0.43
RABGGTA-211ENST00000559850 KIAA1683Q9H0B3 1180 aa17.73■□□□□ 0.43
RABGGTA-211ENST00000559850 NAPBQ9H115 298 aa17.73■□□□□ 0.43
RABGGTA-211ENST00000559850 HELLSQ9NRZ9 838 aa17.73■□□□□ 0.43
RABGGTA-211ENST00000559850 ROBO3Q96MS0 1386 aa17.73■□□□□ 0.43
RABGGTA-211ENST00000559850 VCAM1P19320 739 aa17.72■□□□□ 0.43
RABGGTA-211ENST00000559850 SDSP20132 328 aa17.72■□□□□ 0.43
RABGGTA-211ENST00000559850 RASA1P20936 1047 aa17.72■□□□□ 0.43
RABGGTA-211ENST00000559850 ICA1Q05084 483 aa17.72■□□□□ 0.43
RABGGTA-211ENST00000559850 MCMDC2Q4G0Z9 681 aa17.72■□□□□ 0.43
RABGGTA-211ENST00000559850 C12orf42Q96LP6 360 aa17.72■□□□□ 0.43
RABGGTA-211ENST00000559850 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.72■□□□□ 0.43
RABGGTA-211ENST00000559850 NACAP1Q9BZK3 213 aa17.72■□□□□ 0.43
RABGGTA-211ENST00000559850 MKNK2Q9HBH9 465 aa17.72■□□□□ 0.43
RABGGTA-211ENST00000559850 DOCK3Q8IZD9 2030 aa17.72■□□□□ 0.43
RABGGTA-211ENST00000559850 PARP14Q460N5 1801 aa17.72■□□□□ 0.43
RABGGTA-211ENST00000559850 GSPT1P15170 499 aaKnown RBP17.71■□□□□ 0.43
RABGGTA-211ENST00000559850 HOXA7P31268 230 aaPredicted RBP17.71■□□□□ 0.43
RABGGTA-211ENST00000559850 HERVK_113P62684 666 aa17.71■□□□□ 0.43
RABGGTA-211ENST00000559850 CTDSPL2Q05D32 466 aa17.71■□□□□ 0.43
RABGGTA-211ENST00000559850 PPARAQ07869 468 aa17.71■□□□□ 0.43
RABGGTA-211ENST00000559850 POTEEQ6S8J3 1075 aa17.71■□□□□ 0.43
RABGGTA-211ENST00000559850 SKAP1Q86WV1 359 aa17.71■□□□□ 0.43
RABGGTA-211ENST00000559850 CCDC17Q96LX7 622 aa17.71■□□□□ 0.43
RABGGTA-211ENST00000559850 TXNRD2Q9NNW7 524 aa17.71■□□□□ 0.43
RABGGTA-211ENST00000559850 INCENPQ9NQS7 918 aa17.71■□□□□ 0.43
RABGGTA-211ENST00000559850 RLFQ13129 1914 aa17.7■□□□□ 0.42
RABGGTA-211ENST00000559850 PLXNB2O15031 1838 aa17.7■□□□□ 0.42
RABGGTA-211ENST00000559850 MYCP01106 439 aaPredicted RBP17.7■□□□□ 0.42
RABGGTA-211ENST00000559850 EEF2P13639 858 aaKnown RBP17.7■□□□□ 0.42
RABGGTA-211ENST00000559850 USP14P54578 494 aa17.7■□□□□ 0.42
RABGGTA-211ENST00000559850 FCGRTP55899 365 aa17.7■□□□□ 0.42
RABGGTA-211ENST00000559850 ARHGEF6Q15052 776 aa17.7■□□□□ 0.42
RABGGTA-211ENST00000559850 SPICE1Q8N0Z3 855 aa17.7■□□□□ 0.42
RABGGTA-211ENST00000559850 RPAP3Q9H6T3 665 aaPredicted RBP17.7■□□□□ 0.42
RABGGTA-211ENST00000559850 ARHGEF10LQ9HCE6 1279 aa17.7■□□□□ 0.42
RABGGTA-211ENST00000559850 GABRQQ9UN88 632 aa17.7■□□□□ 0.42
RABGGTA-211ENST00000559850 MYPNQ86TC9 1320 aa17.7■□□□□ 0.42
RABGGTA-211ENST00000559850 GCLCP48506 637 aaPredicted RBP17.69■□□□□ 0.42
RABGGTA-211ENST00000559850 PRKCZQ05513 592 aa17.69■□□□□ 0.42
RABGGTA-211ENST00000559850 TTC22Q5TAA0 569 aa17.69■□□□□ 0.42
RABGGTA-211ENST00000559850 CWC27Q6UX04 472 aaKnown RBP17.69■□□□□ 0.42
RABGGTA-211ENST00000559850 SH3TC2Q8TF17 1288 aa17.69■□□□□ 0.42
RABGGTA-211ENST00000559850 PAGR1Q9BTK6 254 aa17.69■□□□□ 0.42
RABGGTA-211ENST00000559850 SRRDQ9UH36 339 aa17.69■□□□□ 0.42
RABGGTA-211ENST00000559850 TAOK2Q9UL54 1235 aa17.69■□□□□ 0.42
RABGGTA-211ENST00000559850 TACC3Q9Y6A5 838 aa17.69■□□□□ 0.42
RABGGTA-211ENST00000559850 CCDC171Q6TFL3 1326 aa17.69■□□□□ 0.42
RABGGTA-211ENST00000559850 LAMA4Q16363 1823 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 USP17L15C9J2P7 530 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 USP17L13C9JLJ4 530 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 USP17L11C9JVI0 530 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 USP17L18D6R9N7 530 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 USP17L22D6RA61 530 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 USP17L17D6RBQ6 530 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 USP17L19D6RCP7 530 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 USP17L20D6RJB6 530 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 TNPO2O14787 897 aaKnown RBP17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 RAD21O60216 631 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 USP17L24Q0WX57 530 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 FAM110CQ1W6H9 321 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 FAM47AQ5JRC9 791 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 CATSPERGQ6ZRH7 1159 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 ZNF444Q8N0Y2 327 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 DIAPH3Q9NSV4 1193 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 RBPJLQ9UBG7 517 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 TMX2Q9Y320 296 aa17.68■□□□□ 0.42
RABGGTA-211ENST00000559850 COL11A1P12107 1806 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms