RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 TTF2Q9UNY4 1162 aaKnown RBP7.32□□□□□ -1.24
USP3-215ENST00000559771 IQSEC3Q9UPP2 1182 aaPredicted RBP7.32□□□□□ -1.24
USP3-215ENST00000559771 MROH5Q6ZUA9 1318 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 TTLL8A6PVC2 850 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 TCP10L2B9ZVM9 353 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 MYO1BO43795 1136 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 FGFR2P21802 821 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 GRM5P41594 1212 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 CRKP46108 304 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 IREB2P48200 963 aaKnown RBP7.31□□□□□ -1.24
USP3-215ENST00000559771 RBM5P52756 815 aaKnown RBP eCLIP7.31□□□□□ -1.24
USP3-215ENST00000559771 CACNB3P54284 484 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 TAF7LQ5H9L4 462 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 ANKRD13AQ8IZ07 590 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 ZNF511Q8NB15 262 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.31□□□□□ -1.24
USP3-215ENST00000559771 BRI3BPQ8WY22 251 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 SSH1Q8WYL5 1049 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 OPTNQ96CV9 577 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 UNC93B1Q9H1C4 597 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 ELP3Q9H9T3 547 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 MYH13Q9UKX3 1938 aa7.31□□□□□ -1.24
USP3-215ENST00000559771 FIGNL2A6NMB9 653 aa7.3□□□□□ -1.24
USP3-215ENST00000559771 PDE8BO95263 885 aa7.3□□□□□ -1.24
USP3-215ENST00000559771 HDLBPQ00341 1268 aaKnown RBP7.3□□□□□ -1.24
USP3-215ENST00000559771 VGLL4Q14135 290 aa7.3□□□□□ -1.24
USP3-215ENST00000559771 PRPF38BQ5VTL8 546 aaKnown RBP7.3□□□□□ -1.24
USP3-215ENST00000559771 APOBEC3HQ6NTF7 200 aaKnown RBP7.3□□□□□ -1.24
USP3-215ENST00000559771 FAM43AQ8N2R8 423 aa7.3□□□□□ -1.24
USP3-215ENST00000559771 CD99L2Q8TCZ2 262 aa7.3□□□□□ -1.24
USP3-215ENST00000559771 KRTAP4-9Q9BYQ8 210 aa7.3□□□□□ -1.24
USP3-215ENST00000559771 KRTAP4-2Q9BYR5 136 aa7.3□□□□□ -1.24
USP3-215ENST00000559771 PTPN22Q9Y2R2 807 aa7.3□□□□□ -1.24
USP3-215ENST00000559771 TRIM17Q9Y577 477 aa7.3□□□□□ -1.24
USP3-215ENST00000559771 SNCAIPQ9Y6H5 919 aa7.3□□□□□ -1.24
USP3-215ENST00000559771 CDC14CA4D256 554 aa7.29□□□□□ -1.24
USP3-215ENST00000559771 CENPBP07199 599 aaPredicted RBP7.29□□□□□ -1.24
USP3-215ENST00000559771 GUCA2AQ02747 115 aa7.29□□□□□ -1.24
USP3-215ENST00000559771 CHAF1AQ13111 956 aaPredicted RBP7.29□□□□□ -1.24
USP3-215ENST00000559771 FOXD4L6Q3SYB3 417 aaPredicted RBP7.29□□□□□ -1.24
USP3-215ENST00000559771 METTL24Q5JXM2 366 aa7.29□□□□□ -1.24
USP3-215ENST00000559771 FOXD4L3Q6VB84 417 aaPredicted RBP7.29□□□□□ -1.24
USP3-215ENST00000559771 ATG9AQ7Z3C6 839 aa7.29□□□□□ -1.24
USP3-215ENST00000559771 TRMT2AQ8IZ69 625 aaKnown RBP7.29□□□□□ -1.24
USP3-215ENST00000559771 ARMC5Q96C12 935 aa7.29□□□□□ -1.24
USP3-215ENST00000559771 ZDHHC15Q96MV8 337 aa7.29□□□□□ -1.24
USP3-215ENST00000559771 MRIQ9BWK5 157 aa7.29□□□□□ -1.24
USP3-215ENST00000559771 ENAMQ9NRM1 1142 aa7.29□□□□□ -1.24
USP3-215ENST00000559771 WDR70Q9NW82 654 aa7.29□□□□□ -1.24
USP3-215ENST00000559771 PTPRCP08575 1304 aa7.28□□□□□ -1.24
USP3-215ENST00000559771 KIF16BQ96L93 1317 aa7.28□□□□□ -1.24
USP3-215ENST00000559771 SPDYE5A6NIY4 337 aa7.28□□□□□ -1.24
USP3-215ENST00000559771 UPP2O95045 317 aa7.28□□□□□ -1.24
USP3-215ENST00000559771 CD46P15529 392 aa7.28□□□□□ -1.24
USP3-215ENST00000559771 SP3Q02447 781 aa7.28□□□□□ -1.24
USP3-215ENST00000559771 SLFN5Q08AF3 891 aa7.28□□□□□ -1.24
USP3-215ENST00000559771 TNFAIP1Q13829 316 aa7.28□□□□□ -1.24
USP3-215ENST00000559771 ZKSCAN4Q969J2 545 aaPredicted RBP7.28□□□□□ -1.24
USP3-215ENST00000559771 TEKT1Q969V4 418 aa7.28□□□□□ -1.24
USP3-215ENST00000559771 ARHGAP39Q9C0H5 1083 aa7.28□□□□□ -1.24
USP3-215ENST00000559771 CCL15-CCL14A0A0B4J2E2 113 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 EYA2O00167 538 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 KDM4AO75164 1064 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 EN2P19622 333 aaPredicted RBP7.27□□□□□ -1.25
USP3-215ENST00000559771 CTGFP29279 349 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 GTF2A2P52657 109 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 NFIAQ12857 509 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 MOGSQ13724 837 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 PUM3Q15397 648 aaKnown RBP7.27□□□□□ -1.25
USP3-215ENST00000559771 CCL15Q16663 113 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 CAVIN4Q5BKX8 364 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 FKBP1CQ5VVH2 108 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 HHIPL2Q6UWX4 724 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 FAM83AQ86UY5 434 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 TBC1D22AQ8WUA7 517 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 ERO1AQ96HE7 468 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 EFCC1Q9HA90 598 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 EVA1BQ9NVM1 165 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 ATRNL1Q5VV63 1379 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 RPAP1Q9BWH6 1393 aaPredicted RBP7.27□□□□□ -1.25
USP3-215ENST00000559771 ADGRA2Q96PE1 1338 aa7.27□□□□□ -1.25
USP3-215ENST00000559771 RFX7Q2KHR2 1363 aa7.26□□□□□ -1.25
USP3-215ENST00000559771 BTBD19C9JJ37 291 aa7.26□□□□□ -1.25
USP3-215ENST00000559771 E9PSI1 815 aa7.26□□□□□ -1.25
USP3-215ENST00000559771 IRF6O14896 467 aa7.26□□□□□ -1.25
USP3-215ENST00000559771 CCNYL3P0C7X3 344 aa7.26□□□□□ -1.25
USP3-215ENST00000559771 COL8A1P27658 744 aa7.26□□□□□ -1.25
USP3-215ENST00000559771 PRDX5P30044 214 aa7.26□□□□□ -1.25
USP3-215ENST00000559771 INPP5BP32019 993 aa7.26□□□□□ -1.25
USP3-215ENST00000559771 TNNI2P48788 182 aa7.26□□□□□ -1.25
USP3-215ENST00000559771 HIC1Q14526 733 aa7.26□□□□□ -1.25
USP3-215ENST00000559771 TAF1CQ15572 869 aaPredicted RBP7.26□□□□□ -1.25
USP3-215ENST00000559771 DIXDC1Q155Q3 683 aa7.26□□□□□ -1.25
USP3-215ENST00000559771 INTS3Q68E01 1043 aaKnown RBP7.26□□□□□ -1.25
USP3-215ENST00000559771 OTUD7BQ6GQQ9 843 aa7.26□□□□□ -1.25
USP3-215ENST00000559771 CDC42EP5Q6NZY7 148 aa7.26□□□□□ -1.25
USP3-215ENST00000559771 MIGA2Q7L4E1 593 aa7.26□□□□□ -1.25
USP3-215ENST00000559771 VPS37DQ86XT2 251 aa7.26□□□□□ -1.25
USP3-215ENST00000559771 ERO1BQ86YB8 467 aa7.26□□□□□ -1.25
USP3-215ENST00000559771 ZFPM1Q8IX07 1006 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms