RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 MYCLP12524 364 aaPredicted RBP12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 SFPQP23246 707 aaKnown RBP eCLIP12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 SLC10A5Q5PT55 438 aa12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 FOXP4Q8IVH2 680 aaPredicted RBP12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 KAZALD1Q96I82 304 aa12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 DDX19AQ9NUU7 478 aaKnown RBP12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 PAXBP1Q9Y5B6 917 aa12.09□□□□□ -0.47
CARMIL3-202ENST00000559694 FAM196BA6NMK8 535 aa12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 RFX5P48382 616 aaPredicted RBP12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 MYRIPQ8NFW9 859 aa12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 UIMC1Q96RL1 719 aa12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 KANSL2Q9H9L4 492 aa12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 LMBRD1Q9NUN5 540 aa12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 SWAP70Q9UH65 585 aa12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 ALAS1P13196 640 aa12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 CT47A1Q5JQC4 288 aaPredicted RBP12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 KRT79Q5XKE5 535 aa12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 CEP135Q66GS9 1140 aa12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 BRAPQ7Z569 592 aa12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 C17orf53Q8N3J3 647 aaPredicted RBP12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 ZSWIM5Q9P217 1185 aa12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 BACH1O14867 736 aa12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 CYP2D6P10635 497 aa12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 KRT40Q6A162 431 aa12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 DTHD1Q6ZMT9 781 aa12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 TPCN1Q9ULQ1 816 aa12.08□□□□□ -0.48
CARMIL3-202ENST00000559694 SRGNP10124 158 aa12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 ZNF274Q96GC6 653 aaPredicted RBP12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 ANO10Q9NW15 660 aa12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 H0YHG0 523 aa12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 URI1O94763 535 aaPredicted RBP12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 STAT6P42226 847 aa12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 MKRN3Q13064 507 aaKnown RBP12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 ZNF827Q17R98 1081 aa12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 PLIN2Q99541 437 aa12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 MXD3Q9BW11 206 aa12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 UTYO14607 1347 aa12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 ZNF500O60304 480 aaPredicted RBP12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 KIF20AO95235 890 aa12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 CDK8P49336 464 aa12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 ERCC4Q92889 916 aaPredicted RBP12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 CTAGE5O15320 804 aa12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 GRIN3BO60391 1043 aa12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 ADCY7P51828 1080 aa12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 STRIP1Q5VSL9 837 aa12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 ARMC9Q7Z3E5 817 aa12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 SMARCE1Q969G3 411 aa12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 CNOT7Q9UIV1 285 aaKnown RBP12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 V9GYY5 206 aaPredicted RBP12.07□□□□□ -0.48
CARMIL3-202ENST00000559694 MED23Q9ULK4 1368 aa12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 MRPS27Q92552 414 aaKnown RBP12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 TSPYL1Q9H0U9 437 aa12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 SMTNL1A8MU46 457 aa12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 TTLL1O95922 423 aa12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 RILPL1Q5EBL4 403 aa12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 DHX58Q96C10 678 aa12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 RUFY1Q96T51 708 aa12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 GLT8D2Q9H1C3 349 aa12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 VWA3AA6NCI4 1184 aa12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 SMCO2A6NFE2 343 aa12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 TBCAO75347 108 aaKnown RBP12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 SLC44A5Q8NCS7 719 aa12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 FAM200AQ8TCP9 573 aa12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 GTF3C6Q969F1 213 aa12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 DCP1AQ9NPI6 582 aaPredicted RBP12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 INCENPQ9NQS7 918 aa12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 TMEM63CQ9P1W3 806 aa12.06□□□□□ -0.48
CARMIL3-202ENST00000559694 POLRMTO00411 1230 aaKnown RBP12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 DDR1Q08345 913 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 BMS1Q14692 1282 aaKnown RBP12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 SYCP1Q15431 976 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 C3orf67Q6ZVT6 689 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 PPFIBP1Q86W92 1011 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 SLC10A4Q96EP9 437 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 PYM1Q9BRP8 204 aaKnown RBP12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 ABT1Q9ULW3 272 aaKnown RBP12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 MROH7-TTC4A0A0A0MT08 1334 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 NEMFO60524 1076 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 GH2P01242 217 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 U2AF2P26368 475 aaKnown RBP eCLIP12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 PDIA3P30101 505 aaKnown RBP12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 ZFYVE27Q5T4F4 411 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 KANK3Q6NY19 840 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 KCTD1Q719H9 257 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 SYCP3Q8IZU3 236 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 REXO1Q8N1G1 1221 aaKnown RBP12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 DACT1Q9NYF0 836 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 PABPC4Q13310 644 aaKnown RBP eCLIP12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 NONOQ15233 471 aaKnown RBP eCLIP12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 RRAGBQ5VZM2 374 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 APOA5Q6Q788 366 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 MICALL2Q8IY33 904 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 TOPAZ1Q8N9V7 1692 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 MED1Q15648 1581 aaPredicted RBP12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 CHMP2AO43633 222 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 PTGS1P23219 599 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 KLRK1P26718 216 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 SLC16A2P36021 539 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 TXKP42681 527 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms