RNA–Protein interactions for RNA: ENST00000559469.5

LRRC49-217, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 1,204 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-217ENST00000559469 USP17L3A6NCW0 530 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 USP17L4A6NCW7 530 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 H7C1D1 291 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 GPR25O00155 361 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 SNAP23O00161 211 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 ATP9BO43861 1147 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 EGFRP00533 1210 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 F11P03951 625 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 HIRAP54198 1017 aaPredicted RBP8.35□□□□□ -1.07
LRRC49-217ENST00000559469 CLDN10P78369 228 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 TAF7LQ5H9L4 462 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 USP17L2Q6R6M4 530 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 C15orf52Q6ZUT6 534 aaKnown RBP8.35□□□□□ -1.07
LRRC49-217ENST00000559469 USP17L1Q7RTZ2 530 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 PODNQ7Z5L7 613 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 PLEKHM2Q8IWE5 1019 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 JMYQ8N9B5 988 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 GMLQ99445 158 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 API5Q9BZZ5 524 aaKnown RBP8.35□□□□□ -1.07
LRRC49-217ENST00000559469 COA1Q9GZY4 146 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 STK17AQ9UEE5 414 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 PGAP2Q9UHJ9 254 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 NOB1Q9ULX3 412 aaKnown RBP8.35□□□□□ -1.07
LRRC49-217ENST00000559469 IQSEC3Q9UPP2 1182 aaPredicted RBP8.35□□□□□ -1.07
LRRC49-217ENST00000559469 SPEF2Q9C093 1822 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 CNTNAP1P78357 1384 aa8.35□□□□□ -1.07
LRRC49-217ENST00000559469 ZBED9Q6R2W3 1325 aa8.34□□□□□ -1.07
LRRC49-217ENST00000559469 SCN9AQ15858 1988 aa8.34□□□□□ -1.07
LRRC49-217ENST00000559469 KCNJ4P48050 445 aa8.34□□□□□ -1.07
LRRC49-217ENST00000559469 ZNF280AP59817 542 aaPredicted RBP8.34□□□□□ -1.07
LRRC49-217ENST00000559469 TBC1D10BQ4KMP7 808 aaPredicted RBP8.34□□□□□ -1.07
LRRC49-217ENST00000559469 DACT2Q5SW24 774 aa8.34□□□□□ -1.07
LRRC49-217ENST00000559469 LDHAL6AQ6ZMR3 332 aa8.34□□□□□ -1.07
LRRC49-217ENST00000559469 AGBL3Q8NEM8 1001 aa8.34□□□□□ -1.07
LRRC49-217ENST00000559469 RHBDD1Q8TEB9 315 aa8.34□□□□□ -1.07
LRRC49-217ENST00000559469 GTPBP3Q969Y2 492 aaKnown RBP8.34□□□□□ -1.07
LRRC49-217ENST00000559469 GPAMQ9HCL2 828 aa8.34□□□□□ -1.07
LRRC49-217ENST00000559469 A0A1B0GUL6 1792 aa8.33□□□□□ -1.08
LRRC49-217ENST00000559469 TMEM88BA6NKF7 163 aa8.33□□□□□ -1.08
LRRC49-217ENST00000559469 TRAF5O00463 557 aa8.33□□□□□ -1.08
LRRC49-217ENST00000559469 TAF5LO75529 589 aa8.33□□□□□ -1.08
LRRC49-217ENST00000559469 MSX1P28360 303 aa8.33□□□□□ -1.08
LRRC49-217ENST00000559469 FMR1Q06787 632 aaKnown RBP eCLIP8.33□□□□□ -1.08
LRRC49-217ENST00000559469 MTFR1Q15390 333 aa8.33□□□□□ -1.08
LRRC49-217ENST00000559469 KIF4BQ2VIQ3 1234 aa8.33□□□□□ -1.08
LRRC49-217ENST00000559469 GNASQ5JWF2 1037 aa8.33□□□□□ -1.08
LRRC49-217ENST00000559469 WHAMMQ8TF30 809 aa8.33□□□□□ -1.08
LRRC49-217ENST00000559469 ARHGAP45Q92619 1136 aa8.33□□□□□ -1.08
LRRC49-217ENST00000559469 GLIS2Q9BZE0 524 aaPredicted RBP8.33□□□□□ -1.08
LRRC49-217ENST00000559469 PUS3Q9BZE2 481 aaKnown RBP8.33□□□□□ -1.08
LRRC49-217ENST00000559469 CNNM1Q9NRU3 951 aa8.33□□□□□ -1.08
LRRC49-217ENST00000559469 ZNF358Q9NW07 568 aa8.33□□□□□ -1.08
LRRC49-217ENST00000559469 ZNF646O15015 1829 aaPredicted RBP8.33□□□□□ -1.08
LRRC49-217ENST00000559469 MYO3BQ8WXR4 1341 aa8.32□□□□□ -1.08
LRRC49-217ENST00000559469 PALM3A6NDB9 673 aaPredicted RBP8.32□□□□□ -1.08
LRRC49-217ENST00000559469 A6NJY4 79 aa8.32□□□□□ -1.08
LRRC49-217ENST00000559469 RASSF10A6NK89 507 aa8.32□□□□□ -1.08
LRRC49-217ENST00000559469 DKK1O94907 266 aa8.32□□□□□ -1.08
LRRC49-217ENST00000559469 UBTFL1P0CB47 393 aaPredicted RBP8.32□□□□□ -1.08
LRRC49-217ENST00000559469 TRIM27P14373 513 aa8.32□□□□□ -1.08
LRRC49-217ENST00000559469 UBAP2LQ14157 1087 aaKnown RBP8.32□□□□□ -1.08
LRRC49-217ENST00000559469 STRIP1Q5VSL9 837 aa8.32□□□□□ -1.08
LRRC49-217ENST00000559469 INTS3Q68E01 1043 aaKnown RBP8.32□□□□□ -1.08
LRRC49-217ENST00000559469 MEIS3Q99687 375 aa8.32□□□□□ -1.08
LRRC49-217ENST00000559469 MXD3Q9BW11 206 aa8.32□□□□□ -1.08
LRRC49-217ENST00000559469 CD209Q9NNX6 404 aa8.32□□□□□ -1.08
LRRC49-217ENST00000559469 MKRN1Q9UHC7 482 aaKnown RBP8.32□□□□□ -1.08
LRRC49-217ENST00000559469 RIPOR2Q9Y4F9 1068 aa8.32□□□□□ -1.08
LRRC49-217ENST00000559469 ASTN2O75129 1339 aaPredicted RBP8.31□□□□□ -1.08
LRRC49-217ENST00000559469 MROH5Q6ZUA9 1318 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 PSME4Q14997 1843 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 CDK2AP1O14519 115 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 PLIN1O60240 522 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 BCAR3O75815 825 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 IL1R1P14778 569 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 RFX5P48382 616 aaPredicted RBP8.31□□□□□ -1.08
LRRC49-217ENST00000559469 UBE4AQ14139 1066 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 LRRC24Q50LG9 513 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 CST9Q5W186 159 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 ATF7IPQ6VMQ6 1270 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 ZNF804AQ7Z570 1209 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 VGLL2Q8N8G2 317 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 KLHDC4Q8TBB5 520 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 CALR3Q96L12 384 aaKnown RBP8.31□□□□□ -1.08
LRRC49-217ENST00000559469 RUBCNLQ9H714 662 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 MYOZ2Q9NPC6 264 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 GGA3Q9NZ52 723 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 TNNQ9UQP3 1299 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 MAFBQ9Y5Q3 323 aaPredicted RBP8.31□□□□□ -1.08
LRRC49-217ENST00000559469 LRRFIP2Q9Y608 721 aaKnown RBP8.31□□□□□ -1.08
LRRC49-217ENST00000559469 PCNTO95613 3336 aa8.31□□□□□ -1.08
LRRC49-217ENST00000559469 THSD7BQ9C0I4 1608 aa8.3□□□□□ -1.08
LRRC49-217ENST00000559469 LOC100996750A0A140TA64 210 aa8.3□□□□□ -1.08
LRRC49-217ENST00000559469 A0A1B0GTH6 734 aa8.3□□□□□ -1.08
LRRC49-217ENST00000559469 ADM5C9JUS6 153 aa8.3□□□□□ -1.08
LRRC49-217ENST00000559469 IPO8O15397 1037 aaKnown RBP8.3□□□□□ -1.08
LRRC49-217ENST00000559469 SLURP2P0DP57 97 aa8.3□□□□□ -1.08
LRRC49-217ENST00000559469 PLA2G4AP47712 749 aa8.3□□□□□ -1.08
LRRC49-217ENST00000559469 EPHA4P54764 986 aa8.3□□□□□ -1.08
LRRC49-217ENST00000559469 PTPN12Q05209 780 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms