RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 MTMR4Q9NYA4 1195 aa17.49■□□□□ 0.39
SNRPA1-207ENST00000559309 NYAP2Q9P242 653 aa17.49■□□□□ 0.39
SNRPA1-207ENST00000559309 SYNPO2Q9UMS6 1093 aa17.49■□□□□ 0.39
SNRPA1-207ENST00000559309 LOC285556D6RIA3 1793 aa17.48■□□□□ 0.39
SNRPA1-207ENST00000559309 THSD7BQ9C0I4 1608 aa17.48■□□□□ 0.39
SNRPA1-207ENST00000559309 RASSF10A6NK89 507 aa17.48■□□□□ 0.39
SNRPA1-207ENST00000559309 HMGB1P09429 215 aaKnown RBP17.48■□□□□ 0.39
SNRPA1-207ENST00000559309 PPATQ06203 517 aa17.48■□□□□ 0.39
SNRPA1-207ENST00000559309 TRDNQ13061 729 aa17.48■□□□□ 0.39
SNRPA1-207ENST00000559309 SEPT2Q15019 361 aa17.48■□□□□ 0.39
SNRPA1-207ENST00000559309 ERO1BQ86YB8 467 aa17.48■□□□□ 0.39
SNRPA1-207ENST00000559309 CEP95Q96GE4 821 aa17.48■□□□□ 0.39
SNRPA1-207ENST00000559309 KANSL2Q9H9L4 492 aa17.48■□□□□ 0.39
SNRPA1-207ENST00000559309 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.48■□□□□ 0.39
SNRPA1-207ENST00000559309 KCNH4Q9UQ05 1017 aa17.48■□□□□ 0.39
SNRPA1-207ENST00000559309 AFG3L2Q9Y4W6 797 aa17.48■□□□□ 0.39
SNRPA1-207ENST00000559309 MYH4Q9Y623 1939 aa17.48■□□□□ 0.39
SNRPA1-207ENST00000559309 A0A1W2PRG0 241 aa17.47■□□□□ 0.39
SNRPA1-207ENST00000559309 RANBP6O60518 1105 aaKnown RBP17.47■□□□□ 0.39
SNRPA1-207ENST00000559309 TSPY3P0CV98 308 aa17.47■□□□□ 0.39
SNRPA1-207ENST00000559309 TSPY8P0CW00 308 aa17.47■□□□□ 0.39
SNRPA1-207ENST00000559309 RPS6KB1P23443 525 aa17.47■□□□□ 0.39
SNRPA1-207ENST00000559309 PSMA5P28066 241 aa17.47■□□□□ 0.39
SNRPA1-207ENST00000559309 GJA5P36382 358 aa17.47■□□□□ 0.39
SNRPA1-207ENST00000559309 DHX32Q7L7V1 743 aaKnown RBP17.47■□□□□ 0.39
SNRPA1-207ENST00000559309 DGKHQ86XP1 1220 aa17.47■□□□□ 0.39
SNRPA1-207ENST00000559309 TTC14Q96N46 770 aa17.47■□□□□ 0.39
SNRPA1-207ENST00000559309 CABP5Q9NP86 173 aa17.47■□□□□ 0.39
SNRPA1-207ENST00000559309 TSPY2A6NKD2 308 aa17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 USP17L5A8MUK1 530 aa17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 FAM155AB1AL88 458 aaPredicted RBP17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 NMT2O60551 498 aa17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 MCM5P33992 734 aa17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 HUNKP57058 714 aa17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 EVCP57679 992 aa17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 PPIL2Q13356 520 aa17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 SH3D19Q5HYK7 790 aa17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 RUFY3Q7L099 469 aa17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 RALYLQ86SE5 291 aaKnown RBP17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 ENAHQ8N8S7 591 aaPredicted RBP17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 IL27Q8NEV9 243 aa17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 JAKMIP1Q96N16 626 aaKnown RBP17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 ZSCAN10Q96SZ4 725 aaPredicted RBP17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 WBP1LQ9NX94 342 aa17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 CSADQ9Y600 493 aa17.46■□□□□ 0.39
SNRPA1-207ENST00000559309 SH2B2O14492 632 aaPredicted RBP17.45■□□□□ 0.38
SNRPA1-207ENST00000559309 ZBTB48P10074 688 aaPredicted RBP17.45■□□□□ 0.38
SNRPA1-207ENST00000559309 LIFRP42702 1097 aa17.45■□□□□ 0.38
SNRPA1-207ENST00000559309 CTCFP49711 727 aaPredicted RBP17.45■□□□□ 0.38
SNRPA1-207ENST00000559309 MOGSQ13724 837 aa17.45■□□□□ 0.38
SNRPA1-207ENST00000559309 TTLL12Q14166 644 aaPredicted RBP17.45■□□□□ 0.38
SNRPA1-207ENST00000559309 CCDC178Q5BJE1 867 aa17.45■□□□□ 0.38
SNRPA1-207ENST00000559309 RRP12Q5JTH9 1297 aaKnown RBP17.45■□□□□ 0.38
SNRPA1-207ENST00000559309 SGMS1Q86VZ5 419 aa17.45■□□□□ 0.38
SNRPA1-207ENST00000559309 RASAL3Q86YV0 1011 aa17.45■□□□□ 0.38
SNRPA1-207ENST00000559309 CLEC10AQ8IUN9 316 aa17.45■□□□□ 0.38
SNRPA1-207ENST00000559309 CNKSR2Q8WXI2 1034 aa17.45■□□□□ 0.38
SNRPA1-207ENST00000559309 TMEM87BQ96K49 555 aa17.45■□□□□ 0.38
SNRPA1-207ENST00000559309 ELP3Q9H9T3 547 aa17.45■□□□□ 0.38
SNRPA1-207ENST00000559309 UPF2Q9HAU5 1272 aaKnown RBP17.45■□□□□ 0.38
SNRPA1-207ENST00000559309 TMX2Q9Y320 296 aa17.45■□□□□ 0.38
SNRPA1-207ENST00000559309 PRC1O43663 620 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 SLC10A3P09131 477 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 EEF2P13639 858 aaKnown RBP17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 CPA1P15085 419 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 ICA1Q05084 483 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 PPP4R3BQ5MIZ7 849 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 SPRYD7Q5W111 196 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 RGMBQ6NW40 437 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 BLOC1S2Q6QNY1 142 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 CCDC84Q86UT8 332 aaPredicted RBP17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 IQCA1Q86XH1 822 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 ZNF280CQ8ND82 737 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 WNK4Q96J92 1243 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 C12orf42Q96LP6 360 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 KIAA1683Q9H0B3 1180 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 LY9Q9HBG7 655 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 PICK1Q9NRD5 415 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 ZHX2Q9Y6X8 837 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 TNKSO95271 1327 aa17.44■□□□□ 0.38
SNRPA1-207ENST00000559309 MPHOSPH10O00566 681 aaKnown RBP17.43■□□□□ 0.38
SNRPA1-207ENST00000559309 CXCL11O14625 94 aa17.43■□□□□ 0.38
SNRPA1-207ENST00000559309 IRF6O14896 467 aa17.43■□□□□ 0.38
SNRPA1-207ENST00000559309 TTLL1O95922 423 aa17.43■□□□□ 0.38
SNRPA1-207ENST00000559309 CASTP20810 708 aaKnown RBP17.43■□□□□ 0.38
SNRPA1-207ENST00000559309 BACE1P56817 501 aa17.43■□□□□ 0.38
SNRPA1-207ENST00000559309 RAB3GAP1Q15042 981 aa17.43■□□□□ 0.38
SNRPA1-207ENST00000559309 ACER1Q8TDN7 264 aa17.43■□□□□ 0.38
SNRPA1-207ENST00000559309 OPTNQ96CV9 577 aa17.43■□□□□ 0.38
SNRPA1-207ENST00000559309 SLC10A4Q96EP9 437 aa17.43■□□□□ 0.38
SNRPA1-207ENST00000559309 MS4A4AQ96JQ5 239 aa17.43■□□□□ 0.38
SNRPA1-207ENST00000559309 TMEM47Q9BQJ4 181 aa17.43■□□□□ 0.38
SNRPA1-207ENST00000559309 SENP2Q9HC62 589 aa17.43■□□□□ 0.38
SNRPA1-207ENST00000559309 TOMM22Q9NS69 142 aa17.43■□□□□ 0.38
SNRPA1-207ENST00000559309 PARP14Q460N5 1801 aa17.42■□□□□ 0.38
SNRPA1-207ENST00000559309 A0A0G2JLL6 359 aaPredicted RBP17.42■□□□□ 0.38
SNRPA1-207ENST00000559309 TESPA1A2RU30 521 aaPredicted RBP17.42■□□□□ 0.38
SNRPA1-207ENST00000559309 SNHG28P0DPA3 235 aa17.42■□□□□ 0.38
SNRPA1-207ENST00000559309 ECE1P42892 770 aa17.42■□□□□ 0.38
SNRPA1-207ENST00000559309 TOB2Q14106 344 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms