RNA–Protein interactions for RNA: ENST00000559145.1

RORA-209, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-209ENST00000559145 FZD1Q9UP38 647 aa12.04□□□□□ -0.48
RORA-209ENST00000559145 SLC12A7Q9Y666 1083 aa12.04□□□□□ -0.48
RORA-209ENST00000559145 PHF20L1A8MW92 1017 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 CTNND1O60716 968 aaKnown RBP12.03□□□□□ -0.48
RORA-209ENST00000559145 ASNSP08243 561 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 YY1P25490 414 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 IREB2P48200 963 aaKnown RBP12.03□□□□□ -0.48
RORA-209ENST00000559145 ICA1Q05084 483 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 STK3Q13188 491 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 RRP1BQ14684 758 aaKnown RBP12.03□□□□□ -0.48
RORA-209ENST00000559145 SEPT2Q15019 361 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 SEC23AQ15436 765 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 SHROOM1Q2M3G4 852 aaPredicted RBP12.03□□□□□ -0.48
RORA-209ENST00000559145 DGKHQ86XP1 1220 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 RAB11FIP4Q86YS3 637 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 CLEC10AQ8IUN9 316 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 FBXL16Q8N461 479 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 NUP133Q8WUM0 1156 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.03□□□□□ -0.48
RORA-209ENST00000559145 AGXT2Q9BYV1 514 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 KANSL2Q9H9L4 492 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 SENP2Q9HC62 589 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 SH2B1Q9NRF2 756 aaPredicted RBP12.03□□□□□ -0.48
RORA-209ENST00000559145 IL17RBQ9NRM6 502 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 MTMR4Q9NYA4 1195 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 CLIP2Q9UDT6 1046 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 TPCN1Q9ULQ1 816 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 MTMR7Q9Y216 660 aa12.03□□□□□ -0.48
RORA-209ENST00000559145 IGKV6D-41A0A0C4DH26 115 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 ZBTB43O43298 467 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 RAD21O60216 631 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 TTLL1O95922 423 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 TOP1P11387 765 aaKnown RBP12.02□□□□□ -0.49
RORA-209ENST00000559145 INPP5BP32019 993 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 APOA5Q6Q788 366 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 ARMC9Q7Z3E5 817 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 SGMS1Q86VZ5 419 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 MICU3Q86XE3 530 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 SCYL3Q8IZE3 742 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 ZNF654Q8IZM8 581 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 LRRC47Q8N1G4 583 aaKnown RBP12.02□□□□□ -0.49
RORA-209ENST00000559145 KLRG1Q96E93 195 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 TMX3Q96JJ7 454 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 TMEM47Q9BQJ4 181 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 SLKQ9H2G2 1235 aaPredicted RBP12.02□□□□□ -0.49
RORA-209ENST00000559145 ARHGEF10LQ9HCE6 1279 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 GINM1Q9NU53 330 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 BRPF3Q9ULD4 1205 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 CSADQ9Y600 493 aa12.02□□□□□ -0.49
RORA-209ENST00000559145 GOLGA8AA7E2F4 631 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 USP2O75604 605 aaPredicted RBP12.01□□□□□ -0.49
RORA-209ENST00000559145 CALM1P0DP23 149 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 CALM2P0DP24 149 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 CALM3P0DP25 149 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 EEF2P13639 858 aaKnown RBP12.01□□□□□ -0.49
RORA-209ENST00000559145 RXRAP19793 462 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 METAP2P50579 478 aaKnown RBP eCLIP12.01□□□□□ -0.49
RORA-209ENST00000559145 JAG1P78504 1218 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 MAP3K9P80192 1104 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 ME3Q16798 604 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 RCSD1Q6JBY9 416 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 CCDC144CPQ8IYA2 1237 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 NECAB1Q8N987 351 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 PNMA1Q8ND90 353 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.01□□□□□ -0.49
RORA-209ENST00000559145 ANKS1AQ92625 1134 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 ZKSCAN4Q969J2 545 aaPredicted RBP12.01□□□□□ -0.49
RORA-209ENST00000559145 ZNF274Q96GC6 653 aaPredicted RBP12.01□□□□□ -0.49
RORA-209ENST00000559145 FEZ1Q99689 392 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 MYL10Q9BUA6 226 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 SH2D4AQ9H788 454 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 NYAP2Q9P242 653 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 ZNF112Q9UJU3 913 aa12.01□□□□□ -0.49
RORA-209ENST00000559145 ISY1Q9ULR0 285 aaKnown RBP12.01□□□□□ -0.49
RORA-209ENST00000559145 DDAH1O94760 285 aa12□□□□□ -0.49
RORA-209ENST00000559145 CELF2O95319 508 aaKnown RBP12□□□□□ -0.49
RORA-209ENST00000559145 LARGE1O95461 756 aa12□□□□□ -0.49
RORA-209ENST00000559145 PDIA3P30101 505 aaKnown RBP12□□□□□ -0.49
RORA-209ENST00000559145 GUCY1A2P33402 732 aa12□□□□□ -0.49
RORA-209ENST00000559145 CCT2P78371 535 aaKnown RBP12□□□□□ -0.49
RORA-209ENST00000559145 FMR1Q06787 632 aaKnown RBP eCLIP12□□□□□ -0.49
RORA-209ENST00000559145 RTN1Q16799 776 aa12□□□□□ -0.49
RORA-209ENST00000559145 CCDC84Q86UT8 332 aaPredicted RBP12□□□□□ -0.49
RORA-209ENST00000559145 CCDC83Q8IWF9 413 aa12□□□□□ -0.49
RORA-209ENST00000559145 CTCFLQ8NI51 663 aaPredicted RBP12□□□□□ -0.49
RORA-209ENST00000559145 CHMP4CQ96CF2 233 aa12□□□□□ -0.49
RORA-209ENST00000559145 AS3MTQ9HBK9 375 aa12□□□□□ -0.49
RORA-209ENST00000559145 FOXD4L1Q9NU39 408 aa12□□□□□ -0.49
RORA-209ENST00000559145 FRMD4AQ9P2Q2 1039 aaPredicted RBP12□□□□□ -0.49
RORA-209ENST00000559145 DOCK1Q14185 1865 aa12□□□□□ -0.49
RORA-209ENST00000559145 POLR2AP24928 1970 aaKnown RBP11.99□□□□□ -0.49
RORA-209ENST00000559145 USP17L5A8MUK1 530 aa11.99□□□□□ -0.49
RORA-209ENST00000559145 UBE2Q2LH0YL09 131 aa11.99□□□□□ -0.49
RORA-209ENST00000559145 KIF3CO14782 793 aa11.99□□□□□ -0.49
RORA-209ENST00000559145 CPLX1O14810 134 aa11.99□□□□□ -0.49
RORA-209ENST00000559145 DHX16O60231 1041 aaKnown RBP11.99□□□□□ -0.49
RORA-209ENST00000559145 PFKFB2O60825 505 aa11.99□□□□□ -0.49
RORA-209ENST00000559145 KIF5BP33176 963 aa11.99□□□□□ -0.49
RORA-209ENST00000559145 SLC4A3P48751 1232 aa11.99□□□□□ -0.49
RORA-209ENST00000559145 EVCP57679 992 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms