RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 RPGRIP1LQ68CZ1 1315 aa7.27□□□□□ -1.24
CASC4-207ENST00000559037 ENC1O14682 589 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 ZNF157P51786 506 aaPredicted RBP7.27□□□□□ -1.25
CASC4-207ENST00000559037 PSMD2Q13200 908 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 MAP7Q14244 749 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 AKAP4Q5JQC9 854 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 ZMYM1Q5SVZ6 1142 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 TMCO4Q5TGY1 634 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 PAOXQ6QHF9 649 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 TPTE2Q6XPS3 522 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 TMC4Q7Z404 712 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 ATXN3LQ9H3M9 355 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 CCDC86Q9H6F5 360 aaKnown RBP7.27□□□□□ -1.25
CASC4-207ENST00000559037 PARP2Q9UGN5 583 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 RNF112Q9ULX5 631 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 CYP8B1Q9UNU6 501 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 METP08581 1390 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 MSH6P52701 1360 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 PHLPP1O60346 1717 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 SETD5Q9C0A6 1442 aa7.27□□□□□ -1.25
CASC4-207ENST00000559037 MED1Q15648 1581 aaPredicted RBP7.26□□□□□ -1.25
CASC4-207ENST00000559037 ECEL1O95672 775 aa7.26□□□□□ -1.25
CASC4-207ENST00000559037 RXRBP28702 533 aa7.26□□□□□ -1.25
CASC4-207ENST00000559037 ID3Q02535 119 aa7.26□□□□□ -1.25
CASC4-207ENST00000559037 ZNF252P-AS1Q0IIN9 211 aa7.26□□□□□ -1.25
CASC4-207ENST00000559037 TRIM42Q8IWZ5 723 aa7.26□□□□□ -1.25
CASC4-207ENST00000559037 TTF2Q9UNY4 1162 aaKnown RBP7.26□□□□□ -1.25
CASC4-207ENST00000559037 AP4E1Q9UPM8 1137 aa7.26□□□□□ -1.25
CASC4-207ENST00000559037 ACTL7BQ9Y614 415 aa7.26□□□□□ -1.25
CASC4-207ENST00000559037 FAM95CA0A1B0GW59 222 aa7.25□□□□□ -1.25
CASC4-207ENST00000559037 HMX2A2RU54 273 aa7.25□□□□□ -1.25
CASC4-207ENST00000559037 TRIM37O94972 964 aa7.25□□□□□ -1.25
CASC4-207ENST00000559037 RLBP1P12271 317 aa7.25□□□□□ -1.25
CASC4-207ENST00000559037 DRD2P14416 443 aa7.25□□□□□ -1.25
CASC4-207ENST00000559037 ST13P50502 369 aaKnown RBP7.25□□□□□ -1.25
CASC4-207ENST00000559037 SGO2Q562F6 1265 aa7.25□□□□□ -1.25
CASC4-207ENST00000559037 DYMQ7RTS9 669 aa7.25□□□□□ -1.25
CASC4-207ENST00000559037 KCNB2Q92953 911 aa7.25□□□□□ -1.25
CASC4-207ENST00000559037 CACNA2D2Q9NY47 1150 aa7.25□□□□□ -1.25
CASC4-207ENST00000559037 SPATA31E1Q6ZUB1 1445 aa7.25□□□□□ -1.25
CASC4-207ENST00000559037 NALCNQ8IZF0 1738 aa7.24□□□□□ -1.25
CASC4-207ENST00000559037 RGPD8O14715 1765 aaPredicted RBP7.24□□□□□ -1.25
CASC4-207ENST00000559037 TMPRSS2O15393 492 aa7.24□□□□□ -1.25
CASC4-207ENST00000559037 RPS26P62854 115 aaKnown RBP7.24□□□□□ -1.25
CASC4-207ENST00000559037 LLGL2Q6P1M3 1020 aa7.24□□□□□ -1.25
CASC4-207ENST00000559037 CRELD1Q96HD1 420 aa7.24□□□□□ -1.25
CASC4-207ENST00000559037 METTL22Q9BUU2 404 aaPredicted RBP7.24□□□□□ -1.25
CASC4-207ENST00000559037 ACSS3Q9H6R3 686 aa7.24□□□□□ -1.25
CASC4-207ENST00000559037 MRS2Q9HD23 443 aa7.24□□□□□ -1.25
CASC4-207ENST00000559037 CRIM1Q9NZV1 1036 aa7.24□□□□□ -1.25
CASC4-207ENST00000559037 ZNF862O60290 1169 aa7.23□□□□□ -1.25
CASC4-207ENST00000559037 SORBS3O60504 671 aa7.23□□□□□ -1.25
CASC4-207ENST00000559037 ATF3P18847 181 aa7.23□□□□□ -1.25
CASC4-207ENST00000559037 LIG1P18858 919 aa7.23□□□□□ -1.25
CASC4-207ENST00000559037 BMP6P22004 513 aa7.23□□□□□ -1.25
CASC4-207ENST00000559037 ZEB1P37275 1124 aaPredicted RBP7.23□□□□□ -1.25
CASC4-207ENST00000559037 ASPAP45381 313 aa7.23□□□□□ -1.25
CASC4-207ENST00000559037 ERVK-24P63145 666 aa7.23□□□□□ -1.25
CASC4-207ENST00000559037 RGL3Q3MIN7 710 aa7.23□□□□□ -1.25
CASC4-207ENST00000559037 PCNX4Q63HM2 1172 aa7.23□□□□□ -1.25
CASC4-207ENST00000559037 MAP1SQ66K74 1059 aaPredicted RBP7.23□□□□□ -1.25
CASC4-207ENST00000559037 ACSBG1Q96GR2 724 aa7.23□□□□□ -1.25
CASC4-207ENST00000559037 NOC4LQ9BVI4 516 aaKnown RBP7.23□□□□□ -1.25
CASC4-207ENST00000559037 PIDD1Q9HB75 910 aa7.23□□□□□ -1.25
CASC4-207ENST00000559037 CBX8Q9HC52 389 aa7.23□□□□□ -1.25
CASC4-207ENST00000559037 PCDHGC5Q9Y5F6 944 aa7.23□□□□□ -1.25
CASC4-207ENST00000559037 ADGRF5Q8IZF2 1346 aa7.23□□□□□ -1.25
CASC4-207ENST00000559037 COL16A1Q07092 1604 aaPredicted RBP7.23□□□□□ -1.25
CASC4-207ENST00000559037 RAB3GAP2Q9H2M9 1393 aa7.22□□□□□ -1.25
CASC4-207ENST00000559037 CCDC144AA2RUR9 1427 aa7.22□□□□□ -1.25
CASC4-207ENST00000559037 DCCP43146 1447 aa7.22□□□□□ -1.25
CASC4-207ENST00000559037 PRAG1Q86YV5 1406 aa7.22□□□□□ -1.25
CASC4-207ENST00000559037 FBXO24O75426 580 aa7.22□□□□□ -1.25
CASC4-207ENST00000559037 LRP8Q14114 963 aa7.22□□□□□ -1.25
CASC4-207ENST00000559037 CCDC85BQ15834 202 aaPredicted RBP7.22□□□□□ -1.25
CASC4-207ENST00000559037 DIEXFQ68CQ4 756 aaKnown RBP7.22□□□□□ -1.25
CASC4-207ENST00000559037 CDPF1Q6NVV7 123 aa7.22□□□□□ -1.25
CASC4-207ENST00000559037 STK35Q8TDR2 534 aa7.22□□□□□ -1.25
CASC4-207ENST00000559037 FBLIM1Q8WUP2 373 aa7.22□□□□□ -1.25
CASC4-207ENST00000559037 BCL2L13Q9BXK5 485 aa7.22□□□□□ -1.25
CASC4-207ENST00000559037 ZC3H12CQ9C0D7 883 aaKnown RBP7.22□□□□□ -1.25
CASC4-207ENST00000559037 FAM105AQ9NUU6 356 aa7.22□□□□□ -1.25
CASC4-207ENST00000559037 RGS17Q9UGC6 210 aaPredicted RBP7.22□□□□□ -1.25
CASC4-207ENST00000559037 PPP1R9AQ9ULJ8 1098 aa7.22□□□□□ -1.25
CASC4-207ENST00000559037 NHSL1Q5SYE7 1610 aa7.22□□□□□ -1.25
CASC4-207ENST00000559037 ROBO2Q9HCK4 1378 aa7.21□□□□□ -1.25
CASC4-207ENST00000559037 AHDC1Q5TGY3 1603 aaPredicted RBP7.21□□□□□ -1.26
CASC4-207ENST00000559037 PAGE1O75459 146 aa7.21□□□□□ -1.26
CASC4-207ENST00000559037 CELA3AP09093 270 aa7.21□□□□□ -1.26
CASC4-207ENST00000559037 RAB6AP20340 208 aa7.21□□□□□ -1.26
CASC4-207ENST00000559037 GRIK1P39086 918 aa7.21□□□□□ -1.26
CASC4-207ENST00000559037 CYP27A1Q02318 531 aa7.21□□□□□ -1.26
CASC4-207ENST00000559037 TAF1CQ15572 869 aaPredicted RBP7.21□□□□□ -1.26
CASC4-207ENST00000559037 NFKBIBQ15653 356 aa7.21□□□□□ -1.26
CASC4-207ENST00000559037 ZC3H12AQ5D1E8 599 aaKnown RBP7.21□□□□□ -1.26
CASC4-207ENST00000559037 INTS5Q6P9B9 1019 aaKnown RBP7.21□□□□□ -1.26
CASC4-207ENST00000559037 ZDHHC13Q8IUH4 622 aa7.21□□□□□ -1.26
CASC4-207ENST00000559037 FANCD2OSQ96PS1 177 aa7.21□□□□□ -1.26
CASC4-207ENST00000559037 SEMA6CQ9H3T2 930 aa7.21□□□□□ -1.26
CASC4-207ENST00000559037 ANKRD30BQ9BXX2 1392 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms