RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 SIAH1Q8IUQ4 282 aa16.51■□□□□ 0.23
TSPAN3-205ENST00000558745 NACAP1Q9BZK3 213 aa16.51■□□□□ 0.23
TSPAN3-205ENST00000558745 DIAPH3Q9NSV4 1193 aa16.51■□□□□ 0.23
TSPAN3-205ENST00000558745 EMILIN3Q9NT22 766 aa16.51■□□□□ 0.23
TSPAN3-205ENST00000558745 GINM1Q9NU53 330 aa16.51■□□□□ 0.23
TSPAN3-205ENST00000558745 PTPRFP10586 1907 aa16.51■□□□□ 0.23
TSPAN3-205ENST00000558745 TLR2O60603 784 aa16.5■□□□□ 0.23
TSPAN3-205ENST00000558745 FGAP02671 866 aa16.5■□□□□ 0.23
TSPAN3-205ENST00000558745 RASA1P20936 1047 aa16.5■□□□□ 0.23
TSPAN3-205ENST00000558745 PPARAQ07869 468 aa16.5■□□□□ 0.23
TSPAN3-205ENST00000558745 CD99L2Q8TCZ2 262 aa16.5■□□□□ 0.23
TSPAN3-205ENST00000558745 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.5■□□□□ 0.23
TSPAN3-205ENST00000558745 MKNK2Q9HBH9 465 aa16.5■□□□□ 0.23
TSPAN3-205ENST00000558745 AGTPBP1Q9UPW5 1226 aa16.5■□□□□ 0.23
TSPAN3-205ENST00000558745 CCDC171Q6TFL3 1326 aa16.5■□□□□ 0.23
TSPAN3-205ENST00000558745 PEX10O60683 326 aa16.49■□□□□ 0.23
TSPAN3-205ENST00000558745 SP3Q02447 781 aa16.49■□□□□ 0.23
TSPAN3-205ENST00000558745 C17orf99Q6UX52 265 aa16.49■□□□□ 0.23
TSPAN3-205ENST00000558745 TBC1D2Q9BYX2 928 aa16.49■□□□□ 0.23
TSPAN3-205ENST00000558745 TMOD4Q9NZQ9 345 aa16.49■□□□□ 0.23
TSPAN3-205ENST00000558745 C19orf81C9J6K1 198 aa16.48■□□□□ 0.23
TSPAN3-205ENST00000558745 HAND2P61296 217 aa16.48■□□□□ 0.23
TSPAN3-205ENST00000558745 ATP2B2Q01814 1243 aa16.48■□□□□ 0.23
TSPAN3-205ENST00000558745 KIAA1755Q5JYT7 1200 aa16.48■□□□□ 0.23
TSPAN3-205ENST00000558745 USP17L2Q6R6M4 530 aa16.48■□□□□ 0.23
TSPAN3-205ENST00000558745 TMEM179Q6ZVK1 233 aa16.48■□□□□ 0.23
TSPAN3-205ENST00000558745 TICAM2Q86XR7 235 aa16.48■□□□□ 0.23
TSPAN3-205ENST00000558745 PROCA1Q8NCQ7 364 aaPredicted RBP16.48■□□□□ 0.23
TSPAN3-205ENST00000558745 FEZ1Q99689 392 aa16.48■□□□□ 0.23
TSPAN3-205ENST00000558745 ARHGAP39Q9C0H5 1083 aa16.48■□□□□ 0.23
TSPAN3-205ENST00000558745 ZCCHC17Q9NP64 241 aaKnown RBP16.48■□□□□ 0.23
TSPAN3-205ENST00000558745 CHMLP26374 656 aa16.47■□□□□ 0.23
TSPAN3-205ENST00000558745 CTGFP29279 349 aa16.47■□□□□ 0.23
TSPAN3-205ENST00000558745 ALX1Q15699 326 aa16.47■□□□□ 0.23
TSPAN3-205ENST00000558745 NOM1Q5C9Z4 860 aaKnown RBP16.47■□□□□ 0.23
TSPAN3-205ENST00000558745 FAM47AQ5JRC9 791 aa16.47■□□□□ 0.23
TSPAN3-205ENST00000558745 CCDC17Q96LX7 622 aa16.47■□□□□ 0.23
TSPAN3-205ENST00000558745 P2RX7Q99572 595 aaKnown RBP16.47■□□□□ 0.23
TSPAN3-205ENST00000558745 ADGRA2Q96PE1 1338 aa16.47■□□□□ 0.23
TSPAN3-205ENST00000558745 HIP1O00291 1037 aa16.46■□□□□ 0.23
TSPAN3-205ENST00000558745 EEF2P13639 858 aaKnown RBP16.46■□□□□ 0.23
TSPAN3-205ENST00000558745 CTU1Q7Z7A3 348 aaKnown RBP16.46■□□□□ 0.23
TSPAN3-205ENST00000558745 ZNF444Q8N0Y2 327 aaPredicted RBP16.46■□□□□ 0.23
TSPAN3-205ENST00000558745 NKX2-3Q8TAU0 364 aa16.46■□□□□ 0.23
TSPAN3-205ENST00000558745 PARK7Q99497 189 aaKnown RBP16.46■□□□□ 0.23
TSPAN3-205ENST00000558745 ASCC2Q9H1I8 757 aaPredicted RBP16.46■□□□□ 0.23
TSPAN3-205ENST00000558745 ROBO3Q96MS0 1386 aa16.46■□□□□ 0.23
TSPAN3-205ENST00000558745 MYH8P13535 1937 aa16.46■□□□□ 0.22
TSPAN3-205ENST00000558745 ICA1Q05084 483 aa16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 KIAA1683Q9H0B3 1180 aa16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 SLC45A1Q9Y2W3 748 aa16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 TRIM17Q9Y577 477 aa16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 BCRP11274 1271 aa16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 OSBPP22059 807 aa16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 SOX10P56693 466 aa16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 TFAP4Q01664 338 aa16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 PDE4BQ07343 736 aa16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 POTEEQ6S8J3 1075 aa16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 SPICE1Q8N0Z3 855 aa16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 ANKRD13CQ8N6S4 541 aa16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 SMCR8Q8TEV9 937 aaPredicted RBP16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 ERO1AQ96HE7 468 aa16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 NBPF3Q9H094 633 aa16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 TAOK2Q9UL54 1235 aa16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.45■□□□□ 0.22
TSPAN3-205ENST00000558745 ZSWIM8A7E2V4 1837 aa16.44■□□□□ 0.22
TSPAN3-205ENST00000558745 LOC285556D6RIA3 1793 aa16.44■□□□□ 0.22
TSPAN3-205ENST00000558745 SLC3A2P08195 630 aaKnown RBP16.44■□□□□ 0.22
TSPAN3-205ENST00000558745 VCAM1P19320 739 aa16.44■□□□□ 0.22
TSPAN3-205ENST00000558745 HOXA7P31268 230 aaPredicted RBP16.44■□□□□ 0.22
TSPAN3-205ENST00000558745 USP14P54578 494 aa16.44■□□□□ 0.22
TSPAN3-205ENST00000558745 OTOP1Q7RTM1 612 aa16.44■□□□□ 0.22
TSPAN3-205ENST00000558745 CHMP4CQ96CF2 233 aa16.44■□□□□ 0.22
TSPAN3-205ENST00000558745 C12orf42Q96LP6 360 aa16.44■□□□□ 0.22
TSPAN3-205ENST00000558745 KANSL2Q9H9L4 492 aa16.44■□□□□ 0.22
TSPAN3-205ENST00000558745 PPP4R2Q9NY27 417 aa16.44■□□□□ 0.22
TSPAN3-205ENST00000558745 CLIP2Q9UDT6 1046 aa16.44■□□□□ 0.22
TSPAN3-205ENST00000558745 ANAPC4Q9UJX5 808 aa16.44■□□□□ 0.22
TSPAN3-205ENST00000558745 TMX2Q9Y320 296 aa16.44■□□□□ 0.22
TSPAN3-205ENST00000558745 IGKV6D-41A0A0C4DH26 115 aa16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 RAD21O60216 631 aa16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 NMT2O60551 498 aa16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 MFAP1P55081 439 aaKnown RBP16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 IRX3P78415 501 aaPredicted RBP16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 LACTBP83111 547 aaPredicted RBP16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 PTH1RQ03431 593 aa16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 PABPC4Q13310 644 aaKnown RBP eCLIP16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 RRP12Q5JTH9 1297 aaKnown RBP16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 CATSPERGQ6ZRH7 1159 aa16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 TBC1D10CQ8IV04 446 aa16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 CEP95Q96GE4 821 aa16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 RPAP3Q9H6T3 665 aaPredicted RBP16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 EFCC1Q9HA90 598 aa16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 ARHGEF10LQ9HCE6 1279 aa16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 TXNRD2Q9NNW7 524 aa16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 TOMM22Q9NS69 142 aa16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 PNMA3Q9UL41 463 aa16.43■□□□□ 0.22
TSPAN3-205ENST00000558745 USP17L15C9J2P7 530 aa16.42■□□□□ 0.22
TSPAN3-205ENST00000558745 USP17L13C9JLJ4 530 aa16.42■□□□□ 0.22
TSPAN3-205ENST00000558745 USP17L11C9JVI0 530 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms