RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 LRP5O75197 1615 aa12.91□□□□□ -0.34
MARK3-213ENST00000558611 CELA3AP09093 270 aa12.91□□□□□ -0.34
MARK3-213ENST00000558611 IL13P35225 146 aa12.91□□□□□ -0.34
MARK3-213ENST00000558611 RPS26P62854 115 aaKnown RBP12.91□□□□□ -0.34
MARK3-213ENST00000558611 PLAURQ03405 335 aa12.91□□□□□ -0.34
MARK3-213ENST00000558611 FAM160A1Q05DH4 1040 aa12.91□□□□□ -0.34
MARK3-213ENST00000558611 PCNX4Q63HM2 1172 aa12.91□□□□□ -0.34
MARK3-213ENST00000558611 AGMOQ6ZNB7 445 aa12.91□□□□□ -0.34
MARK3-213ENST00000558611 CEP120Q8N960 986 aa12.91□□□□□ -0.34
MARK3-213ENST00000558611 BHLHE41Q9C0J9 482 aaPredicted RBP12.91□□□□□ -0.34
MARK3-213ENST00000558611 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.91□□□□□ -0.34
MARK3-213ENST00000558611 MRVI1Q9Y6F6 885 aa12.91□□□□□ -0.34
MARK3-213ENST00000558611 CASZ1Q86V15 1759 aa12.91□□□□□ -0.34
MARK3-213ENST00000558611 KDRP35968 1356 aa12.91□□□□□ -0.34
MARK3-213ENST00000558611 U2SURPO15042 1029 aaKnown RBP12.9□□□□□ -0.34
MARK3-213ENST00000558611 RPS26P11Q5JNZ5 115 aaPredicted RBP12.9□□□□□ -0.34
MARK3-213ENST00000558611 SNAP47Q5SQN1 464 aa12.9□□□□□ -0.34
MARK3-213ENST00000558611 COL13A1Q5TAT6 717 aaPredicted RBP12.9□□□□□ -0.34
MARK3-213ENST00000558611 LRP10Q7Z4F1 713 aa12.9□□□□□ -0.34
MARK3-213ENST00000558611 SLITRK4Q8IW52 837 aa12.9□□□□□ -0.34
MARK3-213ENST00000558611 GOLM1Q8NBJ4 401 aa12.9□□□□□ -0.34
MARK3-213ENST00000558611 CPLX3Q8WVH0 158 aa12.9□□□□□ -0.34
MARK3-213ENST00000558611 NECAB3Q96P71 396 aaPredicted RBP12.9□□□□□ -0.34
MARK3-213ENST00000558611 DZANK1Q9NVP4 752 aa12.9□□□□□ -0.34
MARK3-213ENST00000558611 UBP1Q9NZI7 540 aa12.9□□□□□ -0.34
MARK3-213ENST00000558611 PRKAG3Q9UGI9 489 aa12.9□□□□□ -0.34
MARK3-213ENST00000558611 KHNYNO15037 678 aaKnown RBP12.89□□□□□ -0.35
MARK3-213ENST00000558611 CYP27B1O15528 508 aa12.89□□□□□ -0.35
MARK3-213ENST00000558611 NFKB1P19838 968 aa12.89□□□□□ -0.35
MARK3-213ENST00000558611 GRIA4P48058 902 aa12.89□□□□□ -0.35
MARK3-213ENST00000558611 TNP2Q05952 138 aa12.89□□□□□ -0.35
MARK3-213ENST00000558611 APOBRQ0VD83 1088 aa12.89□□□□□ -0.35
MARK3-213ENST00000558611 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.89□□□□□ -0.35
MARK3-213ENST00000558611 NKD1Q969G9 470 aa12.89□□□□□ -0.35
MARK3-213ENST00000558611 SRCAPQ6ZRS2 3230 aa12.88□□□□□ -0.35
MARK3-213ENST00000558611 DLG5Q8TDM6 1919 aa12.88□□□□□ -0.35
MARK3-213ENST00000558611 ENPP3O14638 875 aa12.88□□□□□ -0.35
MARK3-213ENST00000558611 ENC1O14682 589 aa12.88□□□□□ -0.35
MARK3-213ENST00000558611 AVPP01185 164 aa12.88□□□□□ -0.35
MARK3-213ENST00000558611 TTBK2Q6IQ55 1244 aa12.88□□□□□ -0.35
MARK3-213ENST00000558611 TMEM102Q8N9M5 508 aaPredicted RBP12.88□□□□□ -0.35
MARK3-213ENST00000558611 SRPK1Q96SB4 655 aaKnown RBP12.88□□□□□ -0.35
MARK3-213ENST00000558611 SRRTQ9BXP5 876 aaKnown RBP12.88□□□□□ -0.35
MARK3-213ENST00000558611 ADAMTS7Q9UKP4 1686 aa12.88□□□□□ -0.35
MARK3-213ENST00000558611 DIAPH1O60610 1272 aaKnown RBP12.87□□□□□ -0.35
MARK3-213ENST00000558611 ACPPP15309 386 aa12.87□□□□□ -0.35
MARK3-213ENST00000558611 SULT6B1Q6IMI4 303 aa12.87□□□□□ -0.35
MARK3-213ENST00000558611 CCDC84Q86UT8 332 aaPredicted RBP12.87□□□□□ -0.35
MARK3-213ENST00000558611 SEC31BQ9NQW1 1179 aa12.87□□□□□ -0.35
MARK3-213ENST00000558611 PLA2G2EQ9NZK7 142 aa12.87□□□□□ -0.35
MARK3-213ENST00000558611 DNMT3LQ9UJW3 386 aa12.87□□□□□ -0.35
MARK3-213ENST00000558611 SIPA1L3O60292 1781 aaPredicted RBP12.86□□□□□ -0.35
MARK3-213ENST00000558611 ZNF831Q5JPB2 1677 aa12.86□□□□□ -0.35
MARK3-213ENST00000558611 SENP3-EIF4A1A0A087X0R7 540 aa12.86□□□□□ -0.35
MARK3-213ENST00000558611 DCDC2BA2VCK2 349 aa12.86□□□□□ -0.35
MARK3-213ENST00000558611 MAPTP10636 758 aaKnown RBP12.86□□□□□ -0.35
MARK3-213ENST00000558611 TFE3P19532 575 aaPredicted RBP12.86□□□□□ -0.35
MARK3-213ENST00000558611 PPP2R1AP30153 589 aa12.86□□□□□ -0.35
MARK3-213ENST00000558611 MMRN1Q13201 1228 aa12.86□□□□□ -0.35
MARK3-213ENST00000558611 GRIN2CQ14957 1233 aa12.86□□□□□ -0.35
MARK3-213ENST00000558611 TNNI3KQ59H18 835 aa12.86□□□□□ -0.35
MARK3-213ENST00000558611 TRIM46Q7Z4K8 759 aa12.86□□□□□ -0.35
MARK3-213ENST00000558611 TRIM42Q8IWZ5 723 aa12.86□□□□□ -0.35
MARK3-213ENST00000558611 SYTL4Q96C24 671 aaPredicted RBP12.86□□□□□ -0.35
MARK3-213ENST00000558611 LRRC3Q9BY71 257 aa12.86□□□□□ -0.35
MARK3-213ENST00000558611 MARK1Q9P0L2 795 aa12.86□□□□□ -0.35
MARK3-213ENST00000558611 R3HCC1Q9Y3T6 440 aaKnown RBP12.86□□□□□ -0.35
MARK3-213ENST00000558611 A0A096LPE4 126 aa12.85□□□□□ -0.35
MARK3-213ENST00000558611 A0A1W2PPZ6 126 aa12.85□□□□□ -0.35
MARK3-213ENST00000558611 NFKBIEO00221 500 aa12.85□□□□□ -0.35
MARK3-213ENST00000558611 THBS1P07996 1170 aa12.85□□□□□ -0.35
MARK3-213ENST00000558611 BMP1P13497 986 aa12.85□□□□□ -0.35
MARK3-213ENST00000558611 PHKG2P15735 406 aa12.85□□□□□ -0.35
MARK3-213ENST00000558611 NRLP54845 237 aa12.85□□□□□ -0.35
MARK3-213ENST00000558611 SPEM2Q0P670 501 aa12.85□□□□□ -0.35
MARK3-213ENST00000558611 UBAP2LQ14157 1087 aaKnown RBP12.85□□□□□ -0.35
MARK3-213ENST00000558611 TXNRD1Q16881 649 aa12.85□□□□□ -0.35
MARK3-213ENST00000558611 DHX32Q7L7V1 743 aaKnown RBP12.85□□□□□ -0.35
MARK3-213ENST00000558611 IFNL2Q8IZJ0 200 aa12.85□□□□□ -0.35
MARK3-213ENST00000558611 HNRNPLLQ8WVV9 542 aaKnown RBP12.85□□□□□ -0.35
MARK3-213ENST00000558611 NXPE3Q969Y0 559 aa12.85□□□□□ -0.35
MARK3-213ENST00000558611 ZNF576Q9H609 170 aa12.85□□□□□ -0.35
MARK3-213ENST00000558611 COL5A3P25940 1745 aaPredicted RBP12.85□□□□□ -0.35
MARK3-213ENST00000558611 CRKP46108 304 aa12.84□□□□□ -0.35
MARK3-213ENST00000558611 DDX10Q13206 875 aaKnown RBP12.84□□□□□ -0.35
MARK3-213ENST00000558611 R3HDM1Q15032 1099 aaKnown RBP12.84□□□□□ -0.35
MARK3-213ENST00000558611 SPRED3Q2MJR0 410 aa12.84□□□□□ -0.35
MARK3-213ENST00000558611 AMOTQ4VCS5 1084 aa12.84□□□□□ -0.35
MARK3-213ENST00000558611 PLEKHO1Q53GL0 409 aaPredicted RBP12.84□□□□□ -0.35
MARK3-213ENST00000558611 ANAPC16Q96DE5 110 aa12.84□□□□□ -0.35
MARK3-213ENST00000558611 SHDQ96IW2 340 aa12.84□□□□□ -0.35
MARK3-213ENST00000558611 CFAP53Q96M91 514 aa12.84□□□□□ -0.35
MARK3-213ENST00000558611 SNTG2Q9NY99 539 aa12.84□□□□□ -0.35
MARK3-213ENST00000558611 UBR3Q6ZT12 1888 aa12.84□□□□□ -0.35
MARK3-213ENST00000558611 KDM6AO15550 1401 aaPredicted RBP12.83□□□□□ -0.36
MARK3-213ENST00000558611 HMOX1P09601 288 aa12.83□□□□□ -0.36
MARK3-213ENST00000558611 RASA3Q14644 834 aa12.83□□□□□ -0.36
MARK3-213ENST00000558611 ZFP42Q96MM3 310 aa12.83□□□□□ -0.36
MARK3-213ENST00000558611 DEPDC7Q96QD5 511 aa12.83□□□□□ -0.36
MARK3-213ENST00000558611 NUCKS1Q9H1E3 243 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms