RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 USP17L21D6R901 530 aa18.63■□□□□ 0.57
CSHL1-208ENST00000558609 AMOTL1Q8IY63 956 aa18.63■□□□□ 0.57
CSHL1-208ENST00000558609 SLC44A5Q8NCS7 719 aa18.63■□□□□ 0.57
CSHL1-208ENST00000558609 ACER1Q8TDN7 264 aa18.63■□□□□ 0.57
CSHL1-208ENST00000558609 OSBP2Q969R2 916 aa18.63■□□□□ 0.57
CSHL1-208ENST00000558609 DYNLL2Q96FJ2 89 aa18.63■□□□□ 0.57
CSHL1-208ENST00000558609 FEZ1Q99689 392 aa18.63■□□□□ 0.57
CSHL1-208ENST00000558609 BAZ2AQ9UIF9 1905 aaKnown RBP18.62■□□□□ 0.57
CSHL1-208ENST00000558609 MX1P20591 662 aa18.62■□□□□ 0.57
CSHL1-208ENST00000558609 FLT3LGP49771 235 aa18.62■□□□□ 0.57
CSHL1-208ENST00000558609 FXR1P51114 621 aaKnown RBP eCLIP18.62■□□□□ 0.57
CSHL1-208ENST00000558609 HERVK_113P62684 666 aa18.62■□□□□ 0.57
CSHL1-208ENST00000558609 IRF5Q13568 498 aa18.62■□□□□ 0.57
CSHL1-208ENST00000558609 SEPT2Q15019 361 aa18.62■□□□□ 0.57
CSHL1-208ENST00000558609 LRRFIP1Q32MZ4 808 aaKnown RBP18.62■□□□□ 0.57
CSHL1-208ENST00000558609 ANKRD45Q5TZF3 282 aa18.62■□□□□ 0.57
CSHL1-208ENST00000558609 CTR9Q6PD62 1173 aa18.62■□□□□ 0.57
CSHL1-208ENST00000558609 COA7Q96BR5 231 aa18.62■□□□□ 0.57
CSHL1-208ENST00000558609 ZBTB47Q9UFB7 747 aaPredicted RBP18.62■□□□□ 0.57
CSHL1-208ENST00000558609 SALL3Q9BXA9 1300 aa18.62■□□□□ 0.57
CSHL1-208ENST00000558609 CYP2D7A0A087X1C5 515 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 USP17L15C9J2P7 530 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 USP17L13C9JLJ4 530 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 USP17L11C9JVI0 530 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 USP17L18D6R9N7 530 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 USP17L22D6RA61 530 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 USP17L17D6RBQ6 530 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 USP17L19D6RCP7 530 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 USP17L20D6RJB6 530 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 MPHOSPH10O00566 681 aaKnown RBP18.61■□□□□ 0.57
CSHL1-208ENST00000558609 CDK8P49336 464 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 USP17L24Q0WX57 530 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 ZYXQ15942 572 aaKnown RBP18.61■□□□□ 0.57
CSHL1-208ENST00000558609 GIMAP6Q6P9H5 292 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 TMEM179Q6ZVK1 233 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 C16orf86Q6ZW13 317 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 SLAIN1Q8ND83 568 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 GTF3C2Q8WUA4 911 aaPredicted RBP18.61■□□□□ 0.57
CSHL1-208ENST00000558609 CCDC17Q96LX7 622 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 RBPJLQ9UBG7 517 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 DOCK3Q8IZD9 2030 aa18.61■□□□□ 0.57
CSHL1-208ENST00000558609 GSG1L2A8MUP6 293 aa18.6■□□□□ 0.57
CSHL1-208ENST00000558609 SMIM22K7EJ46 135 aa18.6■□□□□ 0.57
CSHL1-208ENST00000558609 ADCY3O60266 1144 aa18.6■□□□□ 0.57
CSHL1-208ENST00000558609 SBK1Q52WX2 424 aa18.6■□□□□ 0.57
CSHL1-208ENST00000558609 GPRC5AQ8NFJ5 357 aa18.6■□□□□ 0.57
CSHL1-208ENST00000558609 PXYLP1Q8TE99 480 aa18.6■□□□□ 0.57
CSHL1-208ENST00000558609 TXNRD2Q9NNW7 524 aa18.6■□□□□ 0.57
CSHL1-208ENST00000558609 ARPP21Q9UBL0 812 aaPredicted RBP18.6■□□□□ 0.57
CSHL1-208ENST00000558609 A0A1W2PRG0 241 aa18.59■□□□□ 0.57
CSHL1-208ENST00000558609 MYCP01106 439 aaPredicted RBP18.59■□□□□ 0.57
CSHL1-208ENST00000558609 VCAM1P19320 739 aa18.59■□□□□ 0.57
CSHL1-208ENST00000558609 MTFR1Q15390 333 aa18.59■□□□□ 0.57
CSHL1-208ENST00000558609 POTEEQ6S8J3 1075 aa18.59■□□□□ 0.57
CSHL1-208ENST00000558609 CATSPERGQ6ZRH7 1159 aa18.59■□□□□ 0.57
CSHL1-208ENST00000558609 STAP2Q9UGK3 403 aa18.59■□□□□ 0.57
CSHL1-208ENST00000558609 GPAA1O43292 621 aa18.58■□□□□ 0.56
CSHL1-208ENST00000558609 AKR1B1P15121 316 aa18.58■□□□□ 0.56
CSHL1-208ENST00000558609 GNAT2P19087 354 aa18.58■□□□□ 0.56
CSHL1-208ENST00000558609 UBXN2AP68543 259 aa18.58■□□□□ 0.56
CSHL1-208ENST00000558609 SIAH1Q8IUQ4 282 aa18.58■□□□□ 0.56
CSHL1-208ENST00000558609 BIN2Q9UBW5 565 aaPredicted RBP18.58■□□□□ 0.56
CSHL1-208ENST00000558609 GJD2Q9UKL4 321 aa18.58■□□□□ 0.56
CSHL1-208ENST00000558609 MYH8P13535 1937 aa18.57■□□□□ 0.56
CSHL1-208ENST00000558609 M0R2C6 588 aa18.57■□□□□ 0.56
CSHL1-208ENST00000558609 ERVK-9P63128 1117 aa18.57■□□□□ 0.56
CSHL1-208ENST00000558609 ERVK-24P63145 666 aa18.57■□□□□ 0.56
CSHL1-208ENST00000558609 Q3C1V9 767 aa18.57■□□□□ 0.56
CSHL1-208ENST00000558609 LBX2Q6XYB7 198 aa18.57■□□□□ 0.56
CSHL1-208ENST00000558609 FSD1Q9BTV5 496 aa18.57■□□□□ 0.56
CSHL1-208ENST00000558609 RWDD1Q9H446 243 aaPredicted RBP18.57■□□□□ 0.56
CSHL1-208ENST00000558609 COLQQ9Y215 455 aaPredicted RBP18.57■□□□□ 0.56
CSHL1-208ENST00000558609 RABGAP1Q9Y3P9 1069 aa18.57■□□□□ 0.56
CSHL1-208ENST00000558609 PEX10O60683 326 aa18.56■□□□□ 0.56
CSHL1-208ENST00000558609 CCL5P13501 91 aa18.56■□□□□ 0.56
CSHL1-208ENST00000558609 ELNP15502 786 aa18.56■□□□□ 0.56
CSHL1-208ENST00000558609 PDE1AP54750 535 aa18.56■□□□□ 0.56
CSHL1-208ENST00000558609 RPAP3Q9H6T3 665 aaPredicted RBP18.56■□□□□ 0.56
CSHL1-208ENST00000558609 TMX2Q9Y320 296 aa18.56■□□□□ 0.56
CSHL1-208ENST00000558609 PATL2C9JE40 543 aaKnown RBP18.55■□□□□ 0.56
CSHL1-208ENST00000558609 GJB1P08034 283 aa18.55■□□□□ 0.56
CSHL1-208ENST00000558609 MAPK4P31152 587 aa18.55■□□□□ 0.56
CSHL1-208ENST00000558609 ICA1Q05084 483 aa18.55■□□□□ 0.56
CSHL1-208ENST00000558609 ZMYM1Q5SVZ6 1142 aa18.55■□□□□ 0.56
CSHL1-208ENST00000558609 SMC5Q8IY18 1101 aa18.55■□□□□ 0.56
CSHL1-208ENST00000558609 EXOC6Q8TAG9 804 aa18.55■□□□□ 0.56
CSHL1-208ENST00000558609 NKX2-3Q8TAU0 364 aa18.55■□□□□ 0.56
CSHL1-208ENST00000558609 PAGR1Q9BTK6 254 aa18.55■□□□□ 0.56
CSHL1-208ENST00000558609 RNF208Q9H0X6 261 aa18.55■□□□□ 0.56
CSHL1-208ENST00000558609 ARHGEF10LQ9HCE6 1279 aa18.55■□□□□ 0.56
CSHL1-208ENST00000558609 CNMDO75829 334 aa18.54■□□□□ 0.56
CSHL1-208ENST00000558609 INHAP05111 366 aa18.54■□□□□ 0.56
CSHL1-208ENST00000558609 GJA8P48165 433 aa18.54■□□□□ 0.56
CSHL1-208ENST00000558609 LPAR1Q92633 364 aa18.54■□□□□ 0.56
CSHL1-208ENST00000558609 EVI5LQ96CN4 794 aa18.54■□□□□ 0.56
CSHL1-208ENST00000558609 SEC62Q99442 399 aaKnown RBP18.54■□□□□ 0.56
CSHL1-208ENST00000558609 PORCNQ9H237 461 aa18.54■□□□□ 0.56
CSHL1-208ENST00000558609 SH2D4AQ9H788 454 aa18.54■□□□□ 0.56
CSHL1-208ENST00000558609 KANSL2Q9H9L4 492 aa18.54■□□□□ 0.56
CSHL1-208ENST00000558609 EPB41L4AQ9HCS5 686 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms