RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 GJC2Q5T442 439 aaPredicted RBP8.39□□□□□ -1.07
LRRC28-207ENST00000558500 SPTY2D1Q68D10 685 aaPredicted RBP8.39□□□□□ -1.07
LRRC28-207ENST00000558500 CCDC102BQ68D86 513 aa8.39□□□□□ -1.07
LRRC28-207ENST00000558500 SH3RF1Q7Z6J0 888 aa8.39□□□□□ -1.07
LRRC28-207ENST00000558500 ARRDC4Q8NCT1 418 aa8.39□□□□□ -1.07
LRRC28-207ENST00000558500 TRIM43Q96BQ3 446 aaPredicted RBP8.39□□□□□ -1.07
LRRC28-207ENST00000558500 USP44Q9H0E7 712 aa8.39□□□□□ -1.07
LRRC28-207ENST00000558500 CWC22Q9HCG8 908 aaKnown RBP8.39□□□□□ -1.07
LRRC28-207ENST00000558500 CEP126Q9P2H0 1117 aa8.39□□□□□ -1.07
LRRC28-207ENST00000558500 HERC5Q9UII4 1024 aaKnown RBP8.39□□□□□ -1.07
LRRC28-207ENST00000558500 PTPRFP10586 1907 aa8.39□□□□□ -1.07
LRRC28-207ENST00000558500 PLXNB2O15031 1838 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 PHIPQ8WWQ0 1821 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 DOCK2Q92608 1830 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 LOC285556D6RIA3 1793 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 SLC15A5A6NIM6 579 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 USP17L10C9JJH3 530 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 KBTBD13C9JR72 458 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 CNMDO75829 334 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 GLRX3O76003 335 aaKnown RBP8.38□□□□□ -1.07
LRRC28-207ENST00000558500 CIAO1O76071 339 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 IGHA2P01877 340 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 ASNSP08243 561 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 HOXC6P09630 235 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 C7P10643 843 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 ADORA1P30542 326 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 CYP2C19P33261 490 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 ATP2B2Q01814 1243 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 MAP3K12Q12852 859 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 C1orf53Q5VUE5 145 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 TRPV1Q8NER1 839 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 ZNF384Q8TF68 577 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 ATXN2LQ8WWM7 1075 aaKnown RBP8.38□□□□□ -1.07
LRRC28-207ENST00000558500 RNPC3Q96LT9 517 aaKnown RBP8.38□□□□□ -1.07
LRRC28-207ENST00000558500 SIL1Q9H173 461 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 EMILIN3Q9NT22 766 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 RABGAP1Q9Y3P9 1069 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 NDUFB9Q9Y6M9 179 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 NCOR1O75376 2440 aa8.38□□□□□ -1.07
LRRC28-207ENST00000558500 PIEZO1Q92508 2521 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 CYBAP13498 195 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 PTPREP23469 700 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 DNAJB2P25686 324 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 ITGB8P26012 769 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 IL15P40933 162 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-207ENST00000558500 EPHB4P54760 987 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 CCNA1P78396 465 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 IER5LQ5T953 404 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 ERICH6Q7L0X2 663 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 ADAMTS19Q8TE59 1207 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 ASB2Q96Q27 587 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 UHRF1Q96T88 793 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-207ENST00000558500 ZNF576Q9H609 170 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 GINM1Q9NU53 330 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 THEGQ9P2T0 379 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 PI4KBQ9UBF8 816 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 METRNQ9UJH8 293 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 MAST2Q6P0Q8 1798 aa8.37□□□□□ -1.07
LRRC28-207ENST00000558500 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-207ENST00000558500 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-207ENST00000558500 GDF11O95390 407 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 LDHCP07864 332 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 ADCYAP1R1P41586 468 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 GSTO1P78417 241 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 TLE2Q04725 743 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 GRB14Q14449 540 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 SHROOM1Q2M3G4 852 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-207ENST00000558500 CCDC184Q52MB2 194 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 WDR78Q5VTH9 848 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 METTL16Q86W50 562 aaKnown RBP8.36□□□□□ -1.07
LRRC28-207ENST00000558500 TEX11Q8IYF3 940 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 NPLOC4Q8TAT6 608 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 PPM1EQ8WY54 764 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 NSUN4Q96CB9 384 aaKnown RBP8.36□□□□□ -1.07
LRRC28-207ENST00000558500 TIFAQ96CG3 184 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 DHX36Q9H2U1 1008 aaKnown RBP8.36□□□□□ -1.07
LRRC28-207ENST00000558500 DNAJC18Q9H819 358 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 ZBTB21Q9ULJ3 1066 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 SALL2Q9Y467 1007 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-207ENST00000558500 TACC3Q9Y6A5 838 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 IVNS1ABPQ9Y6Y0 642 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 AK9Q5TCS8 1911 aa8.36□□□□□ -1.07
LRRC28-207ENST00000558500 USP17L15C9J2P7 530 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 USP17L13C9JLJ4 530 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 USP17L11C9JVI0 530 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 USP17L18D6R9N7 530 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 USP17L22D6RA61 530 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 USP17L17D6RBQ6 530 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 USP17L19D6RCP7 530 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 USP17L20D6RJB6 530 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 CLTBP09497 229 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 TIMM10P62072 90 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 MRPS5P82675 430 aaKnown RBP8.35□□□□□ -1.07
LRRC28-207ENST00000558500 USP17L24Q0WX57 530 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 AKNAD1Q5T1N1 836 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 ANO1Q5XXA6 986 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 USP17L2Q6R6M4 530 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 LBX2Q6XYB7 198 aa8.35□□□□□ -1.07
LRRC28-207ENST00000558500 MRPL50Q8N5N7 158 aaKnown RBP8.35□□□□□ -1.07
LRRC28-207ENST00000558500 SH3RF3Q8TEJ3 882 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms