RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 GTF3C6Q969F1 213 aa17.42■□□□□ 0.38
VPS18-202ENST00000558474 MKL1Q969V6 931 aa17.42■□□□□ 0.38
VPS18-202ENST00000558474 SLKQ9H2G2 1235 aaPredicted RBP17.42■□□□□ 0.38
VPS18-202ENST00000558474 KAT14Q9H8E8 782 aa17.42■□□□□ 0.38
VPS18-202ENST00000558474 RRAGCQ9HB90 399 aa17.42■□□□□ 0.38
VPS18-202ENST00000558474 NYAP2Q9P242 653 aa17.42■□□□□ 0.38
VPS18-202ENST00000558474 BRPF3Q9ULD4 1205 aa17.42■□□□□ 0.38
VPS18-202ENST00000558474 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.42■□□□□ 0.38
VPS18-202ENST00000558474 CCDC196A0A1B0GTZ2 297 aa17.41■□□□□ 0.38
VPS18-202ENST00000558474 FAM196BA6NMK8 535 aa17.41■□□□□ 0.38
VPS18-202ENST00000558474 MPHOSPH10O00566 681 aaKnown RBP17.41■□□□□ 0.38
VPS18-202ENST00000558474 ASNSP08243 561 aa17.41■□□□□ 0.38
VPS18-202ENST00000558474 NF2P35240 595 aa17.41■□□□□ 0.38
VPS18-202ENST00000558474 CAP2P40123 477 aa17.41■□□□□ 0.38
VPS18-202ENST00000558474 NOL8Q76FK4 1167 aaKnown RBP17.41■□□□□ 0.38
VPS18-202ENST00000558474 MIGA2Q7L4E1 593 aa17.41■□□□□ 0.38
VPS18-202ENST00000558474 CDAN1Q8IWY9 1227 aa17.41■□□□□ 0.38
VPS18-202ENST00000558474 ZNF654Q8IZM8 581 aa17.41■□□□□ 0.38
VPS18-202ENST00000558474 CEP95Q96GE4 821 aa17.41■□□□□ 0.38
VPS18-202ENST00000558474 LLPHQ9BRT6 129 aaKnown RBP17.41■□□□□ 0.38
VPS18-202ENST00000558474 GPHNQ9NQX3 736 aaPredicted RBP17.41■□□□□ 0.38
VPS18-202ENST00000558474 MYH4Q9Y623 1939 aa17.41■□□□□ 0.38
VPS18-202ENST00000558474 DOCK1Q14185 1865 aa17.4■□□□□ 0.38
VPS18-202ENST00000558474 GOLGA8BA8MQT2 603 aa17.4■□□□□ 0.38
VPS18-202ENST00000558474 NMT2O60551 498 aa17.4■□□□□ 0.38
VPS18-202ENST00000558474 HSP90AA1P07900 732 aaKnown RBP17.4■□□□□ 0.38
VPS18-202ENST00000558474 CWC22Q9HCG8 908 aaKnown RBP17.4■□□□□ 0.38
VPS18-202ENST00000558474 STX8Q9UNK0 236 aa17.4■□□□□ 0.38
VPS18-202ENST00000558474 UNCXA6NJT0 531 aa17.39■□□□□ 0.37
VPS18-202ENST00000558474 LARGE1O95461 756 aa17.39■□□□□ 0.37
VPS18-202ENST00000558474 GH2P01242 217 aa17.39■□□□□ 0.37
VPS18-202ENST00000558474 METAP2P50579 478 aaKnown RBP eCLIP17.39■□□□□ 0.37
VPS18-202ENST00000558474 TROAPQ12815 778 aa17.39■□□□□ 0.37
VPS18-202ENST00000558474 USP48Q86UV5 1035 aa17.39■□□□□ 0.37
VPS18-202ENST00000558474 PNMA1Q8ND90 353 aa17.39■□□□□ 0.37
VPS18-202ENST00000558474 TMEM47Q9BQJ4 181 aa17.39■□□□□ 0.37
VPS18-202ENST00000558474 RBM28Q9NW13 759 aaKnown RBP17.39■□□□□ 0.37
VPS18-202ENST00000558474 ZBTB21Q9ULJ3 1066 aa17.39■□□□□ 0.37
VPS18-202ENST00000558474 SCAF8Q9UPN6 1271 aaKnown RBP17.39■□□□□ 0.37
VPS18-202ENST00000558474 HPS5Q9UPZ3 1129 aa17.39■□□□□ 0.37
VPS18-202ENST00000558474 CLEC11AQ9Y240 323 aa17.39■□□□□ 0.37
VPS18-202ENST00000558474 SSC5DA1L4H1 1573 aa17.39■□□□□ 0.37
VPS18-202ENST00000558474 ADM5C9JUS6 153 aa17.38■□□□□ 0.37
VPS18-202ENST00000558474 PPP1R12BO60237 982 aaPredicted RBP17.38■□□□□ 0.37
VPS18-202ENST00000558474 GDF11O95390 407 aa17.38■□□□□ 0.37
VPS18-202ENST00000558474 PDIA4P13667 645 aaKnown RBP17.38■□□□□ 0.37
VPS18-202ENST00000558474 GUCY1A2P33402 732 aa17.38■□□□□ 0.37
VPS18-202ENST00000558474 SCRN1Q12765 414 aa17.38■□□□□ 0.37
VPS18-202ENST00000558474 NOL9Q5SY16 702 aaKnown RBP17.38■□□□□ 0.37
VPS18-202ENST00000558474 CPLX2Q6PUV4 134 aaKnown RBP17.38■□□□□ 0.37
VPS18-202ENST00000558474 FANCBQ8NB91 859 aa17.38■□□□□ 0.37
VPS18-202ENST00000558474 KLRG1Q96E93 195 aa17.38■□□□□ 0.37
VPS18-202ENST00000558474 CDCA5Q96FF9 252 aa17.38■□□□□ 0.37
VPS18-202ENST00000558474 LARP6Q9BRS8 491 aaKnown RBP17.38■□□□□ 0.37
VPS18-202ENST00000558474 SENP2Q9HC62 589 aa17.38■□□□□ 0.37
VPS18-202ENST00000558474 PAPPA2Q9BXP8 1791 aa17.38■□□□□ 0.37
VPS18-202ENST00000558474 GOLGA8AA7E2F4 631 aa17.37■□□□□ 0.37
VPS18-202ENST00000558474 CDKL5O76039 1030 aa17.37■□□□□ 0.37
VPS18-202ENST00000558474 SLURP2P0DP57 97 aa17.37■□□□□ 0.37
VPS18-202ENST00000558474 KIF5BP33176 963 aa17.37■□□□□ 0.37
VPS18-202ENST00000558474 ICA1Q05084 483 aa17.37■□□□□ 0.37
VPS18-202ENST00000558474 RRP1BQ14684 758 aaKnown RBP17.37■□□□□ 0.37
VPS18-202ENST00000558474 SEPT2Q15019 361 aa17.37■□□□□ 0.37
VPS18-202ENST00000558474 MAP3K11Q16584 847 aa17.37■□□□□ 0.37
VPS18-202ENST00000558474 SH2D4AQ9H788 454 aa17.37■□□□□ 0.37
VPS18-202ENST00000558474 ARHGEF10LQ9HCE6 1279 aa17.37■□□□□ 0.37
VPS18-202ENST00000558474 CLIP2Q9UDT6 1046 aa17.37■□□□□ 0.37
VPS18-202ENST00000558474 NAP1L2Q9ULW6 460 aaPredicted RBP17.37■□□□□ 0.37
VPS18-202ENST00000558474 USP2O75604 605 aaPredicted RBP17.36■□□□□ 0.37
VPS18-202ENST00000558474 EEF2P13639 858 aaKnown RBP17.36■□□□□ 0.37
VPS18-202ENST00000558474 IREB2P48200 963 aaKnown RBP17.36■□□□□ 0.37
VPS18-202ENST00000558474 GNAQP50148 359 aa17.36■□□□□ 0.37
VPS18-202ENST00000558474 HMGN5P82970 282 aaKnown RBP17.36■□□□□ 0.37
VPS18-202ENST00000558474 STK3Q13188 491 aa17.36■□□□□ 0.37
VPS18-202ENST00000558474 RAB3GAP1Q15042 981 aa17.36■□□□□ 0.37
VPS18-202ENST00000558474 RTN1Q16799 776 aa17.36■□□□□ 0.37
VPS18-202ENST00000558474 MICU3Q86XE3 530 aa17.36■□□□□ 0.37
VPS18-202ENST00000558474 CCDC83Q8IWF9 413 aa17.36■□□□□ 0.37
VPS18-202ENST00000558474 SCYL3Q8IZE3 742 aa17.36■□□□□ 0.37
VPS18-202ENST00000558474 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.36■□□□□ 0.37
VPS18-202ENST00000558474 CTCFLQ8NI51 663 aaPredicted RBP17.36■□□□□ 0.37
VPS18-202ENST00000558474 NMRK2Q9NPI5 230 aa17.36■□□□□ 0.37
VPS18-202ENST00000558474 CPLX1O14810 134 aa17.35■□□□□ 0.37
VPS18-202ENST00000558474 ST3GAL1Q11201 340 aa17.35■□□□□ 0.37
VPS18-202ENST00000558474 PRAMEF18Q5VWM3 479 aa17.35■□□□□ 0.37
VPS18-202ENST00000558474 NECAB1Q8N987 351 aa17.35■□□□□ 0.37
VPS18-202ENST00000558474 GMCL1P1Q8NEA9 526 aa17.35■□□□□ 0.37
VPS18-202ENST00000558474 SMARCC2Q8TAQ2 1214 aa17.35■□□□□ 0.37
VPS18-202ENST00000558474 WRNIP1Q96S55 665 aa17.35■□□□□ 0.37
VPS18-202ENST00000558474 LZTS2Q9BRK4 669 aa17.35■□□□□ 0.37
VPS18-202ENST00000558474 GLIS2Q9BZE0 524 aaPredicted RBP17.35■□□□□ 0.37
VPS18-202ENST00000558474 USP17L5A8MUK1 530 aa17.34■□□□□ 0.37
VPS18-202ENST00000558474 SNHG28P0DPA3 235 aa17.34■□□□□ 0.37
VPS18-202ENST00000558474 SMARCA1P28370 1054 aa17.34■□□□□ 0.37
VPS18-202ENST00000558474 SLC4A3P48751 1232 aa17.34■□□□□ 0.37
VPS18-202ENST00000558474 FKBP1BP68106 108 aa17.34■□□□□ 0.37
VPS18-202ENST00000558474 CCT2P78371 535 aaKnown RBP17.34■□□□□ 0.37
VPS18-202ENST00000558474 JAG1P78504 1218 aa17.34■□□□□ 0.37
VPS18-202ENST00000558474 MAP3K9P80192 1104 aa17.34■□□□□ 0.37
VPS18-202ENST00000558474 GRM4Q14833 912 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms