RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 C16orf86Q6ZW13 317 aa10.13□□□□□ -0.79
TPM1-213ENST00000558400 IFNL3Q8IZI9 196 aa10.13□□□□□ -0.79
TPM1-213ENST00000558400 MKNK2Q9HBH9 465 aa10.13□□□□□ -0.79
TPM1-213ENST00000558400 MINDY4BA8MYZ0 360 aa10.12□□□□□ -0.79
TPM1-213ENST00000558400 M0R2C6 588 aa10.12□□□□□ -0.79
TPM1-213ENST00000558400 MPHOSPH10O00566 681 aaKnown RBP10.12□□□□□ -0.79
TPM1-213ENST00000558400 HMGCS2P54868 508 aa10.12□□□□□ -0.79
TPM1-213ENST00000558400 FBXO46Q6PJ61 603 aaPredicted RBP10.12□□□□□ -0.79
TPM1-213ENST00000558400 ZNF444Q8N0Y2 327 aaPredicted RBP10.12□□□□□ -0.79
TPM1-213ENST00000558400 SMCR8Q8TEV9 937 aaPredicted RBP10.12□□□□□ -0.79
TPM1-213ENST00000558400 KIAA1683Q9H0B3 1180 aa10.12□□□□□ -0.79
TPM1-213ENST00000558400 NAPBQ9H115 298 aa10.12□□□□□ -0.79
TPM1-213ENST00000558400 SH2D4AQ9H788 454 aa10.12□□□□□ -0.79
TPM1-213ENST00000558400 KANSL2Q9H9L4 492 aa10.12□□□□□ -0.79
TPM1-213ENST00000558400 EFCC1Q9HA90 598 aa10.12□□□□□ -0.79
TPM1-213ENST00000558400 CUL9Q8IWT3 2517 aa10.11□□□□□ -0.79
TPM1-213ENST00000558400 CYP2D6P10635 497 aa10.11□□□□□ -0.79
TPM1-213ENST00000558400 SDSP20132 328 aa10.11□□□□□ -0.79
TPM1-213ENST00000558400 PRMT2P55345 433 aa10.11□□□□□ -0.79
TPM1-213ENST00000558400 JAG1P78504 1218 aa10.11□□□□□ -0.79
TPM1-213ENST00000558400 LACTBP83111 547 aaPredicted RBP10.11□□□□□ -0.79
TPM1-213ENST00000558400 PDE4BQ07343 736 aa10.11□□□□□ -0.79
TPM1-213ENST00000558400 MTMR2Q13614 643 aa10.11□□□□□ -0.79
TPM1-213ENST00000558400 ALX1Q15699 326 aa10.11□□□□□ -0.79
TPM1-213ENST00000558400 CCDC84Q86UT8 332 aaPredicted RBP10.11□□□□□ -0.79
TPM1-213ENST00000558400 SPDYE1Q8NFV5 336 aaPredicted RBP10.11□□□□□ -0.79
TPM1-213ENST00000558400 GTF3C2Q8WUA4 911 aaPredicted RBP10.11□□□□□ -0.79
TPM1-213ENST00000558400 DYNLL2Q96FJ2 89 aa10.11□□□□□ -0.79
TPM1-213ENST00000558400 C12orf42Q96LP6 360 aa10.11□□□□□ -0.79
TPM1-213ENST00000558400 SEC62Q99442 399 aaKnown RBP10.11□□□□□ -0.79
TPM1-213ENST00000558400 FEZ1Q99689 392 aa10.11□□□□□ -0.79
TPM1-213ENST00000558400 ARHGEF10LQ9HCE6 1279 aa10.11□□□□□ -0.79
TPM1-213ENST00000558400 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.11□□□□□ -0.79
TPM1-213ENST00000558400 TRIM17Q9Y577 477 aa10.11□□□□□ -0.79
TPM1-213ENST00000558400 CEP290O15078 2479 aa10.11□□□□□ -0.79
TPM1-213ENST00000558400 CYP2D7A0A087X1C5 515 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 USP17L15C9J2P7 530 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 USP17L13C9JLJ4 530 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 USP17L11C9JVI0 530 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 USP17L18D6R9N7 530 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 USP17L22D6RA61 530 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 USP17L17D6RBQ6 530 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 USP17L19D6RCP7 530 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 USP17L20D6RJB6 530 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 NEFLP07196 543 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 CYP2C8P10632 490 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 BCRP11274 1271 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 IRX3P78415 501 aaPredicted RBP10.1□□□□□ -0.79
TPM1-213ENST00000558400 USP17L24Q0WX57 530 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 SEPT2Q15019 361 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 PPP4R3BQ5MIZ7 849 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 CENPQQ7L2Z9 268 aaPredicted RBP10.1□□□□□ -0.79
TPM1-213ENST00000558400 OTOP1Q7RTM1 612 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 CD99L2Q8TCZ2 262 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 SP7Q8TDD2 431 aaPredicted RBP10.1□□□□□ -0.79
TPM1-213ENST00000558400 LPAR1Q92633 364 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 DIAPH3Q9NSV4 1193 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 EMILIN3Q9NT22 766 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 HOXC10Q9NYD6 342 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 CPA4Q9UI42 421 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 OTOFQ9HC10 1997 aa10.1□□□□□ -0.79
TPM1-213ENST00000558400 MYH1P12882 1939 aa10.09□□□□□ -0.79
TPM1-213ENST00000558400 CENPBP07199 599 aaPredicted RBP10.09□□□□□ -0.79
TPM1-213ENST00000558400 GUCY1A2P33402 732 aa10.09□□□□□ -0.79
TPM1-213ENST00000558400 FCGRTP55899 365 aa10.09□□□□□ -0.79
TPM1-213ENST00000558400 PPARAQ07869 468 aa10.09□□□□□ -0.79
TPM1-213ENST00000558400 TREML2Q5T2D2 321 aa10.09□□□□□ -0.79
TPM1-213ENST00000558400 NBPF11Q86T75 865 aa10.09□□□□□ -0.79
TPM1-213ENST00000558400 SLC44A5Q8NCS7 719 aa10.09□□□□□ -0.79
TPM1-213ENST00000558400 RUFY2Q8WXA3 655 aa10.09□□□□□ -0.79
TPM1-213ENST00000558400 ASCC2Q9H1I8 757 aaPredicted RBP10.09□□□□□ -0.79
TPM1-213ENST00000558400 PTPN22Q9Y2R2 807 aa10.09□□□□□ -0.79
TPM1-213ENST00000558400 ADGRA2Q96PE1 1338 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 FOCADQ5VW36 1801 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 FMNL1O95466 1100 aaPredicted RBP10.08□□□□□ -0.8
TPM1-213ENST00000558400 FGAP02671 866 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 HSPD1P10809 573 aaKnown RBP10.08□□□□□ -0.8
TPM1-213ENST00000558400 PCP11498 1178 aaKnown RBP10.08□□□□□ -0.8
TPM1-213ENST00000558400 AKR1B1P15121 316 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 PDE4AP27815 886 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 PSMC4P43686 418 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 NT5C2P49902 561 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 EVX2Q03828 476 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 ICA1Q05084 483 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 NMIQ13287 307 aaPredicted RBP10.08□□□□□ -0.8
TPM1-213ENST00000558400 COG2Q14746 738 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 FAM110CQ1W6H9 321 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 SHROOM1Q2M3G4 852 aaPredicted RBP10.08□□□□□ -0.8
TPM1-213ENST00000558400 TTC22Q5TAA0 569 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 CATSPERGQ6ZRH7 1159 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 ACER1Q8TDN7 264 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 FAM227BQ96M60 508 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 P2RX7Q99572 595 aaKnown RBP10.08□□□□□ -0.8
TPM1-213ENST00000558400 EPB41L4AQ9HCS5 686 aaPredicted RBP10.08□□□□□ -0.8
TPM1-213ENST00000558400 NYAP2Q9P242 653 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 ANAPC4Q9UJX5 808 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 TMX2Q9Y320 296 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 LAMB1P07942 1786 aa10.08□□□□□ -0.8
TPM1-213ENST00000558400 CCDC171Q6TFL3 1326 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 DOCK1Q14185 1865 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms