RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 NEDD4P46934 1319 aa12.36□□□□□ -0.43
LRRC28-204ENST00000558172 IGKV6D-41A0A0C4DH26 115 aa12.35□□□□□ -0.43
LRRC28-204ENST00000558172 FAM155AB1AL88 458 aaPredicted RBP12.35□□□□□ -0.43
LRRC28-204ENST00000558172 B4E1Z4 1266 aa12.35□□□□□ -0.43
LRRC28-204ENST00000558172 C19orf81C9J6K1 198 aa12.35□□□□□ -0.43
LRRC28-204ENST00000558172 USP17L10C9JJH3 530 aa12.35□□□□□ -0.43
LRRC28-204ENST00000558172 IRF6O14896 467 aa12.35□□□□□ -0.43
LRRC28-204ENST00000558172 KDM4AO75164 1064 aa12.35□□□□□ -0.43
LRRC28-204ENST00000558172 HMGB1P09429 215 aaKnown RBP12.35□□□□□ -0.43
LRRC28-204ENST00000558172 GTF2A2P52657 109 aa12.35□□□□□ -0.43
LRRC28-204ENST00000558172 ANAPC15P60006 121 aa12.35□□□□□ -0.43
LRRC28-204ENST00000558172 STOX1Q6ZVD7 989 aa12.35□□□□□ -0.43
LRRC28-204ENST00000558172 TTC14Q96N46 770 aa12.35□□□□□ -0.43
LRRC28-204ENST00000558172 MTA3Q9BTC8 594 aa12.35□□□□□ -0.43
LRRC28-204ENST00000558172 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.35□□□□□ -0.43
LRRC28-204ENST00000558172 MTMR4Q9NYA4 1195 aa12.35□□□□□ -0.43
LRRC28-204ENST00000558172 ZSWIM5Q9P217 1185 aa12.35□□□□□ -0.43
LRRC28-204ENST00000558172 NYAP2Q9P242 653 aa12.35□□□□□ -0.43
LRRC28-204ENST00000558172 KCNH4Q9UQ05 1017 aa12.35□□□□□ -0.43
LRRC28-204ENST00000558172 SNX14Q9Y5W7 946 aa12.35□□□□□ -0.43
LRRC28-204ENST00000558172 WDR33Q9C0J8 1336 aaKnown RBP12.35□□□□□ -0.43
LRRC28-204ENST00000558172 MANSC4A6NHS7 340 aaPredicted RBP12.34□□□□□ -0.43
LRRC28-204ENST00000558172 TTLL1O95922 423 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 PSMA5P28066 241 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 MCM5P33992 734 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 MAP2K2P36507 400 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 USP14P54578 494 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 BACE1P56817 501 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 HTRA3P83110 453 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 ICA1Q05084 483 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 SPP2Q13103 211 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 SNAPC2Q13487 334 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 SHROOM1Q2M3G4 852 aaPredicted RBP12.34□□□□□ -0.43
LRRC28-204ENST00000558172 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 CNKSR2Q8WXI2 1034 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 MKL1Q969V6 931 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 CEP95Q96GE4 821 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 NEK1Q96PY6 1258 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 BACH2Q9BYV9 841 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 SYNPO2Q9UMS6 1093 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 TAF6LQ9Y6J9 622 aa12.34□□□□□ -0.43
LRRC28-204ENST00000558172 ERICH2A1L162 156 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 CETPP11597 493 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 EEF2P13639 858 aaKnown RBP12.33□□□□□ -0.44
LRRC28-204ENST00000558172 GJA5P36382 358 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 NOVP48745 357 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 VEGFBP49765 207 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 SREBF2Q12772 1141 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 GRM1Q13255 1194 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 SART3Q15020 963 aaKnown RBP12.33□□□□□ -0.44
LRRC28-204ENST00000558172 SH3D19Q5HYK7 790 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 USP17L2Q6R6M4 530 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 FASTKD5Q7L8L6 764 aaKnown RBP12.33□□□□□ -0.44
LRRC28-204ENST00000558172 CCDC84Q86UT8 332 aaPredicted RBP12.33□□□□□ -0.44
LRRC28-204ENST00000558172 DGKHQ86XP1 1220 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 MB21D2Q8IYB1 491 aaPredicted RBP12.33□□□□□ -0.44
LRRC28-204ENST00000558172 ZSCAN10Q96SZ4 725 aaPredicted RBP12.33□□□□□ -0.44
LRRC28-204ENST00000558172 UBAC1Q9BSL1 405 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 KIAA1683Q9H0B3 1180 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 IL17RBQ9NRM6 502 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.33□□□□□ -0.44
LRRC28-204ENST00000558172 CLIP2Q9UDT6 1046 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 TMX2Q9Y320 296 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 WDR19Q8NEZ3 1342 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 LOC285556D6RIA3 1793 aa12.33□□□□□ -0.44
LRRC28-204ENST00000558172 A0A0G2JLL6 359 aaPredicted RBP12.32□□□□□ -0.44
LRRC28-204ENST00000558172 TESPA1A2RU30 521 aaPredicted RBP12.32□□□□□ -0.44
LRRC28-204ENST00000558172 TRIM75PA6NK02 468 aa12.32□□□□□ -0.44
LRRC28-204ENST00000558172 ATP2B2Q01814 1243 aa12.32□□□□□ -0.44
LRRC28-204ENST00000558172 KIF23Q02241 960 aaPredicted RBP12.32□□□□□ -0.44
LRRC28-204ENST00000558172 DHX32Q7L7V1 743 aaKnown RBP12.32□□□□□ -0.44
LRRC28-204ENST00000558172 PRRT2Q7Z6L0 340 aaPredicted RBP12.32□□□□□ -0.44
LRRC28-204ENST00000558172 SIAH1Q8IUQ4 282 aa12.32□□□□□ -0.44
LRRC28-204ENST00000558172 PROCA1Q8NCQ7 364 aaPredicted RBP12.32□□□□□ -0.44
LRRC28-204ENST00000558172 ANKS1AQ92625 1134 aa12.32□□□□□ -0.44
LRRC28-204ENST00000558172 MS4A4AQ96JQ5 239 aa12.32□□□□□ -0.44
LRRC28-204ENST00000558172 TMEM87BQ96K49 555 aa12.32□□□□□ -0.44
LRRC28-204ENST00000558172 FEZ1Q99689 392 aa12.32□□□□□ -0.44
LRRC28-204ENST00000558172 TM6SF1Q9BZW5 370 aa12.32□□□□□ -0.44
LRRC28-204ENST00000558172 TMOD4Q9NZQ9 345 aa12.32□□□□□ -0.44
LRRC28-204ENST00000558172 STX8Q9UNK0 236 aa12.32□□□□□ -0.44
LRRC28-204ENST00000558172 THSD7BQ9C0I4 1608 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 CCL15-CCL14A0A0B4J2E2 113 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 A0A1W2PRG0 241 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 IFIT3O14879 490 aaKnown RBP12.31□□□□□ -0.44
LRRC28-204ENST00000558172 TOP1P11387 765 aaKnown RBP12.31□□□□□ -0.44
LRRC28-204ENST00000558172 TM4SF4P48230 202 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 MKRN3Q13064 507 aaKnown RBP12.31□□□□□ -0.44
LRRC28-204ENST00000558172 MTMR2Q13614 643 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 CCL15Q16663 113 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 ADCK5Q3MIX3 580 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 OTUD7BQ6GQQ9 843 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 BLOC1S2Q6QNY1 142 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 CYB5R4Q7L1T6 521 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 TMTC2Q8N394 836 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 ACER1Q8TDN7 264 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 LPAR1Q92633 364 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 IL17RAQ96F46 866 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 C12orf42Q96LP6 360 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 JAKMIP1Q96N16 626 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms