RNA–Protein interactions for RNA: ENST00000558126.1

LYSMD2-203, Transcript of LysM domain containing 2, humanhuman

TSL 5 BASIC

Gene LYSMD2, Length 775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-203ENST00000558126 XAGE2Q96GT9 111 aa12.82□□□□□ -0.36
LYSMD2-203ENST00000558126 LRCH3Q96II8 777 aa12.82□□□□□ -0.36
LYSMD2-203ENST00000558126 API5Q9BZZ5 524 aaKnown RBP12.82□□□□□ -0.36
LYSMD2-203ENST00000558126 ASCC2Q9H1I8 757 aaPredicted RBP12.82□□□□□ -0.36
LYSMD2-203ENST00000558126 C11orf49Q9H6J7 331 aa12.82□□□□□ -0.36
LYSMD2-203ENST00000558126 AS3MTQ9HBK9 375 aa12.82□□□□□ -0.36
LYSMD2-203ENST00000558126 MGAMO43451 1857 aa12.81□□□□□ -0.36
LYSMD2-203ENST00000558126 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
LYSMD2-203ENST00000558126 SLURP2P0DP57 97 aa12.81□□□□□ -0.36
LYSMD2-203ENST00000558126 GTF3C2Q8WUA4 911 aaPredicted RBP12.81□□□□□ -0.36
LYSMD2-203ENST00000558126 SOCS4Q8WXH5 440 aa12.81□□□□□ -0.36
LYSMD2-203ENST00000558126 DHX36Q9H2U1 1008 aaKnown RBP12.81□□□□□ -0.36
LYSMD2-203ENST00000558126 SMC4Q9NTJ3 1288 aa12.81□□□□□ -0.36
LYSMD2-203ENST00000558126 PI4KBQ9UBF8 816 aa12.81□□□□□ -0.36
LYSMD2-203ENST00000558126 PA2G4Q9UQ80 394 aaKnown RBP12.81□□□□□ -0.36
LYSMD2-203ENST00000558126 ARIH1Q9Y4X5 557 aaPredicted RBP12.81□□□□□ -0.36
LYSMD2-203ENST00000558126 AK9Q5TCS8 1911 aa12.81□□□□□ -0.36
LYSMD2-203ENST00000558126 COL6A3P12111 3177 aa12.81□□□□□ -0.36
LYSMD2-203ENST00000558126 SPDYE16A6NNV3 312 aaPredicted RBP12.8□□□□□ -0.36
LYSMD2-203ENST00000558126 PPP1R3GB7ZBB8 358 aa12.8□□□□□ -0.36
LYSMD2-203ENST00000558126 C19orf81C9J6K1 198 aa12.8□□□□□ -0.36
LYSMD2-203ENST00000558126 HMGCS2P54868 508 aa12.8□□□□□ -0.36
LYSMD2-203ENST00000558126 BACE1P56817 501 aa12.8□□□□□ -0.36
LYSMD2-203ENST00000558126 CCDC84Q86UT8 332 aaPredicted RBP12.8□□□□□ -0.36
LYSMD2-203ENST00000558126 SPATA5Q8NB90 893 aa12.8□□□□□ -0.36
LYSMD2-203ENST00000558126 ARHGAP45Q92619 1136 aa12.8□□□□□ -0.36
LYSMD2-203ENST00000558126 HMG20BQ9P0W2 317 aa12.8□□□□□ -0.36
LYSMD2-203ENST00000558126 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.8□□□□□ -0.36
LYSMD2-203ENST00000558126 STXBP5LQ9Y2K9 1186 aa12.8□□□□□ -0.36
LYSMD2-203ENST00000558126 DOCK3Q8IZD9 2030 aa12.79□□□□□ -0.36
LYSMD2-203ENST00000558126 ASNSP08243 561 aa12.79□□□□□ -0.36
LYSMD2-203ENST00000558126 GNAI3P08754 354 aa12.79□□□□□ -0.36
LYSMD2-203ENST00000558126 ARID4AP29374 1257 aaPredicted RBP12.79□□□□□ -0.36
LYSMD2-203ENST00000558126 FOXP4Q8IVH2 680 aaPredicted RBP12.79□□□□□ -0.36
LYSMD2-203ENST00000558126 C7orf61Q8IZ16 206 aa12.79□□□□□ -0.36
LYSMD2-203ENST00000558126 TDHQ8IZJ6 230 aa12.79□□□□□ -0.36
LYSMD2-203ENST00000558126 GPRC5AQ8NFJ5 357 aa12.79□□□□□ -0.36
LYSMD2-203ENST00000558126 TRIB2Q92519 343 aa12.79□□□□□ -0.36
LYSMD2-203ENST00000558126 USP6NLQ92738 828 aa12.79□□□□□ -0.36
LYSMD2-203ENST00000558126 NUDT12Q9BQG2 462 aa12.79□□□□□ -0.36
LYSMD2-203ENST00000558126 NOB1Q9ULX3 412 aaKnown RBP12.79□□□□□ -0.36
LYSMD2-203ENST00000558126 MYH2Q9UKX2 1941 aa12.78□□□□□ -0.36
LYSMD2-203ENST00000558126 BHMG1C9JSJ3 638 aaPredicted RBP12.78□□□□□ -0.36
LYSMD2-203ENST00000558126 COL6A1P12109 1028 aa12.78□□□□□ -0.36
LYSMD2-203ENST00000558126 MAPK4P31152 587 aa12.78□□□□□ -0.36
LYSMD2-203ENST00000558126 MAGEA10P43363 369 aaPredicted RBP12.78□□□□□ -0.36
LYSMD2-203ENST00000558126 PPP4CP60510 307 aa12.78□□□□□ -0.36
LYSMD2-203ENST00000558126 IRX3P78415 501 aaPredicted RBP12.78□□□□□ -0.36
LYSMD2-203ENST00000558126 TFCP2Q12800 502 aa12.78□□□□□ -0.36
LYSMD2-203ENST00000558126 RRP1BQ14684 758 aaKnown RBP12.78□□□□□ -0.36
LYSMD2-203ENST00000558126 TMOD4Q9NZQ9 345 aa12.78□□□□□ -0.36
LYSMD2-203ENST00000558126 PHIPQ8WWQ0 1821 aa12.78□□□□□ -0.36
LYSMD2-203ENST00000558126 DOCK2Q92608 1830 aa12.78□□□□□ -0.36
LYSMD2-203ENST00000558126 DOCK1Q14185 1865 aa12.78□□□□□ -0.36
LYSMD2-203ENST00000558126 PTPRFP10586 1907 aa12.78□□□□□ -0.36
LYSMD2-203ENST00000558126 MYH13Q9UKX3 1938 aa12.78□□□□□ -0.36
LYSMD2-203ENST00000558126 SRGAP3O43295 1099 aa12.77□□□□□ -0.37
LYSMD2-203ENST00000558126 BAG3O95817 575 aa12.77□□□□□ -0.37
LYSMD2-203ENST00000558126 UQCRFS1P1P0C7P4 283 aa12.77□□□□□ -0.37
LYSMD2-203ENST00000558126 HERVK_113P62684 666 aa12.77□□□□□ -0.37
LYSMD2-203ENST00000558126 TRIM32Q13049 653 aa12.77□□□□□ -0.37
LYSMD2-203ENST00000558126 DEFB123Q8N688 67 aa12.77□□□□□ -0.37
LYSMD2-203ENST00000558126 P2RX7Q99572 595 aaKnown RBP12.77□□□□□ -0.37
LYSMD2-203ENST00000558126 MEIS3Q99687 375 aa12.77□□□□□ -0.37
LYSMD2-203ENST00000558126 MTMR10Q9NXD2 777 aa12.77□□□□□ -0.37
LYSMD2-203ENST00000558126 ZMYND8Q9ULU4 1186 aaPredicted RBP12.77□□□□□ -0.37
LYSMD2-203ENST00000558126 FAM196BA6NMK8 535 aa12.76□□□□□ -0.37
LYSMD2-203ENST00000558126 USP17L10C9JJH3 530 aa12.76□□□□□ -0.37
LYSMD2-203ENST00000558126 MORN1Q5T089 497 aa12.76□□□□□ -0.37
LYSMD2-203ENST00000558126 FAM109BQ6ICB4 259 aaPredicted RBP12.76□□□□□ -0.37
LYSMD2-203ENST00000558126 TEX11Q8IYF3 940 aa12.76□□□□□ -0.37
LYSMD2-203ENST00000558126 RAI14Q9P0K7 980 aa12.76□□□□□ -0.37
LYSMD2-203ENST00000558126 RBPJLQ9UBG7 517 aa12.76□□□□□ -0.37
LYSMD2-203ENST00000558126 PFASO15067 1338 aa12.76□□□□□ -0.37
LYSMD2-203ENST00000558126 ZKSCAN1P17029 563 aaPredicted RBP12.75□□□□□ -0.37
LYSMD2-203ENST00000558126 CYP2B6P20813 491 aa12.75□□□□□ -0.37
LYSMD2-203ENST00000558126 RGS2P41220 211 aa12.75□□□□□ -0.37
LYSMD2-203ENST00000558126 MTMR2Q13614 643 aa12.75□□□□□ -0.37
LYSMD2-203ENST00000558126 PDE3AQ14432 1141 aa12.75□□□□□ -0.37
LYSMD2-203ENST00000558126 GORABQ5T7V8 394 aa12.75□□□□□ -0.37
LYSMD2-203ENST00000558126 TBC1D9Q6ZT07 1266 aa12.75□□□□□ -0.37
LYSMD2-203ENST00000558126 DDX12PQ92771 950 aa12.75□□□□□ -0.37
LYSMD2-203ENST00000558126 NEUROD6Q96NK8 337 aa12.75□□□□□ -0.37
LYSMD2-203ENST00000558126 NOL10Q9BSC4 688 aaKnown RBP12.75□□□□□ -0.37
LYSMD2-203ENST00000558126 UBE2OQ9C0C9 1292 aaKnown RBP12.75□□□□□ -0.37
LYSMD2-203ENST00000558126 TXNRD2Q9NNW7 524 aa12.75□□□□□ -0.37
LYSMD2-203ENST00000558126 GPR108Q9NPR9 543 aa12.75□□□□□ -0.37
LYSMD2-203ENST00000558126 LRP2BPQ9P2M1 347 aa12.75□□□□□ -0.37
LYSMD2-203ENST00000558126 LOC285556D6RIA3 1793 aa12.74□□□□□ -0.37
LYSMD2-203ENST00000558126 MCAMP43121 646 aa12.74□□□□□ -0.37
LYSMD2-203ENST00000558126 ERVK-9P63128 1117 aa12.74□□□□□ -0.37
LYSMD2-203ENST00000558126 ERVK-24P63145 666 aa12.74□□□□□ -0.37
LYSMD2-203ENST00000558126 CACNB2Q08289 660 aaPredicted RBP12.74□□□□□ -0.37
LYSMD2-203ENST00000558126 C6orf132Q5T0Z8 1188 aa12.74□□□□□ -0.37
LYSMD2-203ENST00000558126 TMED8Q6PL24 325 aaPredicted RBP12.74□□□□□ -0.37
LYSMD2-203ENST00000558126 GPR142Q7Z601 462 aa12.74□□□□□ -0.37
LYSMD2-203ENST00000558126 PLEKHH3Q7Z736 793 aa12.74□□□□□ -0.37
LYSMD2-203ENST00000558126 CERS3Q8IU89 383 aa12.74□□□□□ -0.37
LYSMD2-203ENST00000558126 SH3RF3Q8TEJ3 882 aaPredicted RBP12.74□□□□□ -0.37
LYSMD2-203ENST00000558126 CDCA7LQ96GN5 454 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms