RNA–Protein interactions for RNA: ENST00000557694.1

LGMN-218, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-218ENST00000557694 USP6NLQ92738 828 aa18.68■□□□□ 0.58
LGMN-218ENST00000557694 DEFB118Q96PH6 123 aa18.68■□□□□ 0.58
LGMN-218ENST00000557694 PAGR1Q9BTK6 254 aa18.68■□□□□ 0.58
LGMN-218ENST00000557694 C19orf81C9J6K1 198 aa18.67■□□□□ 0.58
LGMN-218ENST00000557694 POLR3DP05423 398 aaPredicted RBP18.67■□□□□ 0.58
LGMN-218ENST00000557694 VCAM1P19320 739 aa18.67■□□□□ 0.58
LGMN-218ENST00000557694 CYP2B6P20813 491 aa18.67■□□□□ 0.58
LGMN-218ENST00000557694 GCLCP48506 637 aaPredicted RBP18.67■□□□□ 0.58
LGMN-218ENST00000557694 C12orf42Q96LP6 360 aa18.67■□□□□ 0.58
LGMN-218ENST00000557694 TBC1D2Q9BYX2 928 aa18.67■□□□□ 0.58
LGMN-218ENST00000557694 DCTPP1Q9H773 170 aa18.67■□□□□ 0.58
LGMN-218ENST00000557694 PAK6Q9NQU5 681 aaPredicted RBP18.67■□□□□ 0.58
LGMN-218ENST00000557694 TMOD4Q9NZQ9 345 aa18.67■□□□□ 0.58
LGMN-218ENST00000557694 PNMA3Q9UL41 463 aa18.67■□□□□ 0.58
LGMN-218ENST00000557694 COLQQ9Y215 455 aaPredicted RBP18.67■□□□□ 0.58
LGMN-218ENST00000557694 SGPL1O95470 568 aa18.66■□□□□ 0.58
LGMN-218ENST00000557694 IRX3P78415 501 aaPredicted RBP18.66■□□□□ 0.58
LGMN-218ENST00000557694 TTF1Q15361 905 aaPredicted RBP18.66■□□□□ 0.58
LGMN-218ENST00000557694 HABP4Q5JVS0 413 aaKnown RBP18.66■□□□□ 0.58
LGMN-218ENST00000557694 USP17L2Q6R6M4 530 aa18.66■□□□□ 0.58
LGMN-218ENST00000557694 PXYLP1Q8TE99 480 aa18.66■□□□□ 0.58
LGMN-218ENST00000557694 TRIM34Q9BYJ4 488 aa18.66■□□□□ 0.58
LGMN-218ENST00000557694 CRNKL1Q9BZJ0 848 aaKnown RBP18.66■□□□□ 0.58
LGMN-218ENST00000557694 LRRCC1Q9C099 1032 aa18.66■□□□□ 0.58
LGMN-218ENST00000557694 FLRT1Q9NZU1 646 aa18.66■□□□□ 0.58
LGMN-218ENST00000557694 IGSF3O75054 1194 aa18.65■□□□□ 0.58
LGMN-218ENST00000557694 ERVK-9P63128 1117 aa18.65■□□□□ 0.58
LGMN-218ENST00000557694 ERVK-24P63145 666 aa18.65■□□□□ 0.58
LGMN-218ENST00000557694 CATSPERGQ6ZRH7 1159 aa18.65■□□□□ 0.58
LGMN-218ENST00000557694 TTC6Q86TZ1 520 aa18.65■□□□□ 0.58
LGMN-218ENST00000557694 OSBP2Q969R2 916 aa18.65■□□□□ 0.58
LGMN-218ENST00000557694 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.65■□□□□ 0.58
LGMN-218ENST00000557694 KIAA1683Q9H0B3 1180 aa18.65■□□□□ 0.58
LGMN-218ENST00000557694 RANBP2P49792 3224 aaKnown RBP18.65■□□□□ 0.58
LGMN-218ENST00000557694 SPDYE16A6NNV3 312 aaPredicted RBP18.64■□□□□ 0.57
LGMN-218ENST00000557694 USP17L12C9JPN9 530 aa18.64■□□□□ 0.57
LGMN-218ENST00000557694 USP17L21D6R901 530 aa18.64■□□□□ 0.57
LGMN-218ENST00000557694 MORN1Q5T089 497 aa18.64■□□□□ 0.57
LGMN-218ENST00000557694 C12orf60Q5U649 245 aa18.64■□□□□ 0.57
LGMN-218ENST00000557694 STK11IPQ8N1F8 1099 aa18.64■□□□□ 0.57
LGMN-218ENST00000557694 COA7Q96BR5 231 aa18.64■□□□□ 0.57
LGMN-218ENST00000557694 SEC62Q99442 399 aaKnown RBP18.64■□□□□ 0.57
LGMN-218ENST00000557694 CRISPLD2Q9H0B8 497 aa18.64■□□□□ 0.57
LGMN-218ENST00000557694 RPAP3Q9H6T3 665 aaPredicted RBP18.64■□□□□ 0.57
LGMN-218ENST00000557694 PARP14Q460N5 1801 aa18.64■□□□□ 0.57
LGMN-218ENST00000557694 TRIOBPQ9H2D6 2365 aa18.63■□□□□ 0.57
LGMN-218ENST00000557694 CTR9Q6PD62 1173 aa18.63■□□□□ 0.57
LGMN-218ENST00000557694 GPR142Q7Z601 462 aa18.63■□□□□ 0.57
LGMN-218ENST00000557694 GPRC5AQ8NFJ5 357 aa18.63■□□□□ 0.57
LGMN-218ENST00000557694 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.63■□□□□ 0.57
LGMN-218ENST00000557694 EPB41L4AQ9HCS5 686 aaPredicted RBP18.63■□□□□ 0.57
LGMN-218ENST00000557694 GINM1Q9NU53 330 aa18.63■□□□□ 0.57
LGMN-218ENST00000557694 M0R2C6 588 aa18.62■□□□□ 0.57
LGMN-218ENST00000557694 CDK8P49336 464 aa18.62■□□□□ 0.57
LGMN-218ENST00000557694 UBXN2AP68543 259 aa18.62■□□□□ 0.57
LGMN-218ENST00000557694 PABPC4Q13310 644 aaKnown RBP eCLIP18.62■□□□□ 0.57
LGMN-218ENST00000557694 UBE3CQ15386 1083 aa18.62■□□□□ 0.57
LGMN-218ENST00000557694 MAP3K21Q5TCX8 1036 aa18.62■□□□□ 0.57
LGMN-218ENST00000557694 CRBNQ96SW2 442 aa18.62■□□□□ 0.57
LGMN-218ENST00000557694 FEZ1Q99689 392 aa18.62■□□□□ 0.57
LGMN-218ENST00000557694 MYH8P13535 1937 aa18.62■□□□□ 0.57
LGMN-218ENST00000557694 GREB1LQ9C091 1923 aaPredicted RBP18.61■□□□□ 0.57
LGMN-218ENST00000557694 A0A0G2JMZ2 1700 aa18.61■□□□□ 0.57
LGMN-218ENST00000557694 GSG1L2A8MUP6 293 aa18.61■□□□□ 0.57
LGMN-218ENST00000557694 MPHOSPH10O00566 681 aaKnown RBP18.61■□□□□ 0.57
LGMN-218ENST00000557694 FARP2O94887 1054 aaPredicted RBP18.61■□□□□ 0.57
LGMN-218ENST00000557694 CCND3P30281 292 aaPredicted RBP18.61■□□□□ 0.57
LGMN-218ENST00000557694 SPICE1Q8N0Z3 855 aa18.61■□□□□ 0.57
LGMN-218ENST00000557694 NPLOC4Q8TAT6 608 aa18.61■□□□□ 0.57
LGMN-218ENST00000557694 PI4K2BQ8TCG2 481 aa18.61■□□□□ 0.57
LGMN-218ENST00000557694 PAWRQ96IZ0 340 aaKnown RBP18.61■□□□□ 0.57
LGMN-218ENST00000557694 STRBPQ96SI9 672 aaKnown RBP18.61■□□□□ 0.57
LGMN-218ENST00000557694 ECHDC1Q9NTX5 307 aa18.61■□□□□ 0.57
LGMN-218ENST00000557694 SZT2Q5T011 3432 aa18.61■□□□□ 0.57
LGMN-218ENST00000557694 SALL3Q9BXA9 1300 aa18.6■□□□□ 0.57
LGMN-218ENST00000557694 USP17L15C9J2P7 530 aa18.6■□□□□ 0.57
LGMN-218ENST00000557694 USP17L13C9JLJ4 530 aa18.6■□□□□ 0.57
LGMN-218ENST00000557694 USP17L11C9JVI0 530 aa18.6■□□□□ 0.57
LGMN-218ENST00000557694 USP17L18D6R9N7 530 aa18.6■□□□□ 0.57
LGMN-218ENST00000557694 USP17L22D6RA61 530 aa18.6■□□□□ 0.57
LGMN-218ENST00000557694 USP17L17D6RBQ6 530 aa18.6■□□□□ 0.57
LGMN-218ENST00000557694 USP17L19D6RCP7 530 aa18.6■□□□□ 0.57
LGMN-218ENST00000557694 USP17L20D6RJB6 530 aa18.6■□□□□ 0.57
LGMN-218ENST00000557694 FOXP2O15409 715 aa18.6■□□□□ 0.57
LGMN-218ENST00000557694 FXR1P51114 621 aaKnown RBP eCLIP18.6■□□□□ 0.57
LGMN-218ENST00000557694 CACNB2Q08289 660 aaPredicted RBP18.6■□□□□ 0.57
LGMN-218ENST00000557694 USP17L24Q0WX57 530 aa18.6■□□□□ 0.57
LGMN-218ENST00000557694 FBXO28Q9NVF7 368 aa18.6■□□□□ 0.57
LGMN-218ENST00000557694 TACC3Q9Y6A5 838 aa18.6■□□□□ 0.57
LGMN-218ENST00000557694 SLC4A4Q9Y6R1 1079 aa18.6■□□□□ 0.57
LGMN-218ENST00000557694 IGHA2P01877 340 aa18.59■□□□□ 0.57
LGMN-218ENST00000557694 TFRCP02786 760 aaKnown RBP18.59■□□□□ 0.57
LGMN-218ENST00000557694 HMGCRP04035 888 aa18.59■□□□□ 0.57
LGMN-218ENST00000557694 RRP1P56182 461 aaKnown RBP18.59■□□□□ 0.57
LGMN-218ENST00000557694 CERS3Q8IU89 383 aa18.59■□□□□ 0.57
LGMN-218ENST00000557694 TRPV1Q8NER1 839 aa18.59■□□□□ 0.57
LGMN-218ENST00000557694 PRO3102Q9H379 93 aa18.59■□□□□ 0.57
LGMN-218ENST00000557694 COL11A1P12107 1806 aaPredicted RBP18.58■□□□□ 0.57
LGMN-218ENST00000557694 PRKAR2AP13861 404 aaKnown RBP18.58■□□□□ 0.56
LGMN-218ENST00000557694 CHRDL2Q6WN34 429 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms