RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 LMBR1LQ6UX01 489 aa16.64■□□□□ 0.25
TMEM260-215ENST00000557626 ANKRD33Q7Z3H0 272 aa16.64■□□□□ 0.25
TMEM260-215ENST00000557626 IDI2Q9BXS1 227 aa16.64■□□□□ 0.25
TMEM260-215ENST00000557626 AS3MTQ9HBK9 375 aa16.64■□□□□ 0.25
TMEM260-215ENST00000557626 TRIM35Q9UPQ4 493 aa16.64■□□□□ 0.25
TMEM260-215ENST00000557626 A0A1W2PQ45 241 aaPredicted RBP16.63■□□□□ 0.25
TMEM260-215ENST00000557626 A0A1W2PQY0 241 aa16.63■□□□□ 0.25
TMEM260-215ENST00000557626 RFXAPO00287 272 aa16.63■□□□□ 0.25
TMEM260-215ENST00000557626 DCXO43602 365 aa16.63■□□□□ 0.25
TMEM260-215ENST00000557626 PTPREP23469 700 aa16.63■□□□□ 0.25
TMEM260-215ENST00000557626 PTPN5P54829 565 aa16.63■□□□□ 0.25
TMEM260-215ENST00000557626 FAM178BQ8IXR5 827 aa16.63■□□□□ 0.25
TMEM260-215ENST00000557626 MIER1Q8N108 512 aa16.63■□□□□ 0.25
TMEM260-215ENST00000557626 TMEM199Q8N511 208 aa16.63■□□□□ 0.25
TMEM260-215ENST00000557626 ANKS1AQ92625 1134 aa16.63■□□□□ 0.25
TMEM260-215ENST00000557626 CHMP4AQ9BY43 222 aa16.63■□□□□ 0.25
TMEM260-215ENST00000557626 BAHCC1Q9P281 2608 aa16.63■□□□□ 0.25
TMEM260-215ENST00000557626 RABGGTBP53611 331 aa16.62■□□□□ 0.25
TMEM260-215ENST00000557626 RALBP1Q15311 655 aa16.62■□□□□ 0.25
TMEM260-215ENST00000557626 CCDC184Q52MB2 194 aa16.62■□□□□ 0.25
TMEM260-215ENST00000557626 KRT40Q6A162 431 aa16.62■□□□□ 0.25
TMEM260-215ENST00000557626 HFE2Q6ZVN8 426 aa16.62■□□□□ 0.25
TMEM260-215ENST00000557626 WDR66Q8TBY9 1149 aa16.62■□□□□ 0.25
TMEM260-215ENST00000557626 MFSD14AQ96MC6 490 aa16.62■□□□□ 0.25
TMEM260-215ENST00000557626 TBX21Q9UL17 535 aa16.62■□□□□ 0.25
TMEM260-215ENST00000557626 FAM196BA6NMK8 535 aa16.61■□□□□ 0.25
TMEM260-215ENST00000557626 GRB14Q14449 540 aa16.61■□□□□ 0.25
TMEM260-215ENST00000557626 PRSS33Q8NF86 280 aa16.61■□□□□ 0.25
TMEM260-215ENST00000557626 RFX7Q2KHR2 1363 aa16.61■□□□□ 0.25
TMEM260-215ENST00000557626 TBC1D12O60347 775 aa16.6■□□□□ 0.25
TMEM260-215ENST00000557626 KRT37O76014 449 aa16.6■□□□□ 0.25
TMEM260-215ENST00000557626 IGHA2P01877 340 aa16.6■□□□□ 0.25
TMEM260-215ENST00000557626 MYOGP15173 224 aa16.6■□□□□ 0.25
TMEM260-215ENST00000557626 BACE1P56817 501 aa16.6■□□□□ 0.25
TMEM260-215ENST00000557626 PICALMQ13492 652 aa16.6■□□□□ 0.25
TMEM260-215ENST00000557626 OLFML2BQ68BL8 750 aa16.6■□□□□ 0.25
TMEM260-215ENST00000557626 RNF180Q86T96 592 aa16.6■□□□□ 0.25
TMEM260-215ENST00000557626 PUS3Q9BZE2 481 aaKnown RBP16.6■□□□□ 0.25
TMEM260-215ENST00000557626 PCDHA11Q9Y5I1 949 aa16.6■□□□□ 0.25
TMEM260-215ENST00000557626 MROH5Q6ZUA9 1318 aa16.6■□□□□ 0.25
TMEM260-215ENST00000557626 MYO15AQ9UKN7 3530 aa16.6■□□□□ 0.25
TMEM260-215ENST00000557626 MYH2Q9UKX2 1941 aa16.6■□□□□ 0.25
TMEM260-215ENST00000557626 SMCHD1A6NHR9 2005 aa16.59■□□□□ 0.25
TMEM260-215ENST00000557626 ANP32CO43423 234 aa16.59■□□□□ 0.25
TMEM260-215ENST00000557626 PRDX5P30044 214 aa16.59■□□□□ 0.25
TMEM260-215ENST00000557626 SAMD1Q6SPF0 538 aaPredicted RBP16.59■□□□□ 0.25
TMEM260-215ENST00000557626 XPNPEP3Q9NQH7 507 aa16.59■□□□□ 0.25
TMEM260-215ENST00000557626 RABGAP1Q9Y3P9 1069 aa16.59■□□□□ 0.25
TMEM260-215ENST00000557626 KMT2BQ9UMN6 2715 aaPredicted RBP16.58■□□□□ 0.25
TMEM260-215ENST00000557626 CAP2P40123 477 aa16.58■□□□□ 0.24
TMEM260-215ENST00000557626 DPP9Q86TI2 863 aa16.58■□□□□ 0.24
TMEM260-215ENST00000557626 CERS4Q9HA82 394 aa16.58■□□□□ 0.24
TMEM260-215ENST00000557626 IL23AQ9NPF7 189 aa16.58■□□□□ 0.24
TMEM260-215ENST00000557626 DDX4Q9NQI0 724 aaKnown RBP16.58■□□□□ 0.24
TMEM260-215ENST00000557626 PKD1L2Q7Z442 2459 aa16.58■□□□□ 0.24
TMEM260-215ENST00000557626 FGBP02675 491 aa16.57■□□□□ 0.24
TMEM260-215ENST00000557626 LDHBP07195 334 aaKnown RBP16.57■□□□□ 0.24
TMEM260-215ENST00000557626 RARBP10826 455 aa16.57■□□□□ 0.24
TMEM260-215ENST00000557626 C8orf58Q8NAV2 365 aa16.57■□□□□ 0.24
TMEM260-215ENST00000557626 LINS1Q8NG48 757 aa16.57■□□□□ 0.24
TMEM260-215ENST00000557626 WDR18Q9BV38 432 aa16.57■□□□□ 0.24
TMEM260-215ENST00000557626 STK31Q9BXU1 1019 aa16.57■□□□□ 0.24
TMEM260-215ENST00000557626 PPP1R12CQ9BZL4 782 aa16.57■□□□□ 0.24
TMEM260-215ENST00000557626 STARD7Q9NQZ5 370 aa16.57■□□□□ 0.24
TMEM260-215ENST00000557626 ZNF236Q9UL36 1845 aa16.56■□□□□ 0.24
TMEM260-215ENST00000557626 MROH7Q68CQ1 1323 aa16.56■□□□□ 0.24
TMEM260-215ENST00000557626 EPOPA6NHQ4 379 aa16.56■□□□□ 0.24
TMEM260-215ENST00000557626 CNMDO75829 334 aa16.56■□□□□ 0.24
TMEM260-215ENST00000557626 PGK1P00558 417 aa16.56■□□□□ 0.24
TMEM260-215ENST00000557626 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
TMEM260-215ENST00000557626 EPHA10Q5JZY3 1008 aa16.56■□□□□ 0.24
TMEM260-215ENST00000557626 PRAMEF19Q5SWL8 479 aa16.56■□□□□ 0.24
TMEM260-215ENST00000557626 OTOP2Q7RTS6 562 aa16.56■□□□□ 0.24
TMEM260-215ENST00000557626 CCDC146Q8IYE0 955 aa16.56■□□□□ 0.24
TMEM260-215ENST00000557626 CACNA1HO95180 2353 aa16.56■□□□□ 0.24
TMEM260-215ENST00000557626 ZFHX4Q86UP3 3567 aa16.56■□□□□ 0.24
TMEM260-215ENST00000557626 RIF1Q5UIP0 2472 aaKnown RBP16.55■□□□□ 0.24
TMEM260-215ENST00000557626 POTEB3A0JP26 581 aa16.55■□□□□ 0.24
TMEM260-215ENST00000557626 C19orf81C9J6K1 198 aa16.55■□□□□ 0.24
TMEM260-215ENST00000557626 ZNF853P0CG23 659 aa16.55■□□□□ 0.24
TMEM260-215ENST00000557626 METTL24Q5JXM2 366 aa16.55■□□□□ 0.24
TMEM260-215ENST00000557626 POTEBQ6S5H4 581 aa16.55■□□□□ 0.24
TMEM260-215ENST00000557626 NUP133Q8WUM0 1156 aa16.55■□□□□ 0.24
TMEM260-215ENST00000557626 SLC4A7Q9Y6M7 1214 aa16.55■□□□□ 0.24
TMEM260-215ENST00000557626 USP17L10C9JJH3 530 aa16.54■□□□□ 0.24
TMEM260-215ENST00000557626 RRP1BQ14684 758 aaKnown RBP16.54■□□□□ 0.24
TMEM260-215ENST00000557626 G2E3Q7L622 706 aa16.54■□□□□ 0.24
TMEM260-215ENST00000557626 DNAAF4Q8WXU2 420 aa16.54■□□□□ 0.24
TMEM260-215ENST00000557626 PRRX2Q99811 253 aa16.54■□□□□ 0.24
TMEM260-215ENST00000557626 GAKO14976 1311 aa16.53■□□□□ 0.24
TMEM260-215ENST00000557626 CA3P07451 260 aa16.53■□□□□ 0.24
TMEM260-215ENST00000557626 IL9P15248 144 aa16.53■□□□□ 0.24
TMEM260-215ENST00000557626 ADORA2AP29274 412 aa16.53■□□□□ 0.24
TMEM260-215ENST00000557626 ARNTL2Q8WYA1 636 aa16.53■□□□□ 0.24
TMEM260-215ENST00000557626 UBE2ZQ9H832 354 aaPredicted RBP16.53■□□□□ 0.24
TMEM260-215ENST00000557626 CHD8Q9HCK8 2581 aa16.53■□□□□ 0.24
TMEM260-215ENST00000557626 FAM186AA6NE01 2351 aa16.52■□□□□ 0.24
TMEM260-215ENST00000557626 KIF16BQ96L93 1317 aa16.52■□□□□ 0.24
TMEM260-215ENST00000557626 LEXMQ3ZCV2 418 aa16.52■□□□□ 0.24
TMEM260-215ENST00000557626 TMEM67Q5HYA8 995 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms