RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 FAM196BA6NMK8 535 aa9.97□□□□□ -0.81
PSEN1-223ENST00000557511 USP17L5A8MUK1 530 aa9.97□□□□□ -0.81
PSEN1-223ENST00000557511 PHF20L1A8MW92 1017 aa9.97□□□□□ -0.81
PSEN1-223ENST00000557511 ARHGAP33O14559 1287 aa9.97□□□□□ -0.81
PSEN1-223ENST00000557511 TDO2P48775 406 aa9.97□□□□□ -0.81
PSEN1-223ENST00000557511 MFAP1P55081 439 aaKnown RBP9.97□□□□□ -0.81
PSEN1-223ENST00000557511 TICAM2Q86XR7 235 aa9.97□□□□□ -0.81
PSEN1-223ENST00000557511 SDR42E1Q8WUS8 393 aa9.97□□□□□ -0.81
PSEN1-223ENST00000557511 EHD4Q9H223 541 aa9.97□□□□□ -0.81
PSEN1-223ENST00000557511 ZNF287Q9HBT7 754 aa9.97□□□□□ -0.81
PSEN1-223ENST00000557511 ZFYVE28Q9HCC9 887 aa9.97□□□□□ -0.81
PSEN1-223ENST00000557511 DCP1AQ9NPI6 582 aaPredicted RBP9.97□□□□□ -0.81
PSEN1-223ENST00000557511 ARPP21Q9UBL0 812 aaPredicted RBP9.97□□□□□ -0.81
PSEN1-223ENST00000557511 SWAP70Q9UH65 585 aa9.97□□□□□ -0.81
PSEN1-223ENST00000557511 THSD7BQ9C0I4 1608 aa9.96□□□□□ -0.81
PSEN1-223ENST00000557511 GRXCR2A6NFK2 248 aa9.96□□□□□ -0.82
PSEN1-223ENST00000557511 HIP1O00291 1037 aa9.96□□□□□ -0.82
PSEN1-223ENST00000557511 MPHOSPH10O00566 681 aaKnown RBP9.96□□□□□ -0.82
PSEN1-223ENST00000557511 IRF6O14896 467 aa9.96□□□□□ -0.82
PSEN1-223ENST00000557511 GPAA1O43292 621 aa9.96□□□□□ -0.82
PSEN1-223ENST00000557511 TBC1D8O95759 1140 aa9.96□□□□□ -0.82
PSEN1-223ENST00000557511 SLC3A2P08195 630 aaKnown RBP9.96□□□□□ -0.82
PSEN1-223ENST00000557511 PTPRAP18433 802 aa9.96□□□□□ -0.82
PSEN1-223ENST00000557511 GJA5P36382 358 aa9.96□□□□□ -0.82
PSEN1-223ENST00000557511 ARHGEF6Q15052 776 aa9.96□□□□□ -0.82
PSEN1-223ENST00000557511 TAF1CQ15572 869 aaPredicted RBP9.96□□□□□ -0.82
PSEN1-223ENST00000557511 CERKLQ49MI3 558 aaPredicted RBP9.96□□□□□ -0.82
PSEN1-223ENST00000557511 TYW1BQ6NUM6 668 aa9.96□□□□□ -0.82
PSEN1-223ENST00000557511 GIMAP6Q6P9H5 292 aa9.96□□□□□ -0.82
PSEN1-223ENST00000557511 GADL1Q6ZQY3 521 aa9.96□□□□□ -0.82
PSEN1-223ENST00000557511 PUS7LQ9H0K6 701 aaKnown RBP9.96□□□□□ -0.82
PSEN1-223ENST00000557511 OSBPL3Q9H4L5 887 aa9.96□□□□□ -0.82
PSEN1-223ENST00000557511 ZCCHC17Q9NP64 241 aaKnown RBP9.96□□□□□ -0.82
PSEN1-223ENST00000557511 DIAPH3Q9NSV4 1193 aa9.96□□□□□ -0.82
PSEN1-223ENST00000557511 TMOD4Q9NZQ9 345 aa9.96□□□□□ -0.82
PSEN1-223ENST00000557511 PCDHGA10Q9Y5H3 936 aa9.96□□□□□ -0.82
PSEN1-223ENST00000557511 TESPA1A2RU30 521 aaPredicted RBP9.95□□□□□ -0.82
PSEN1-223ENST00000557511 TRIM75PA6NK02 468 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 PATL2C9JE40 543 aaKnown RBP9.95□□□□□ -0.82
PSEN1-223ENST00000557511 PRKAB2O43741 272 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 PABPC4Q13310 644 aaKnown RBP eCLIP9.95□□□□□ -0.82
PSEN1-223ENST00000557511 ABCB5Q2M3G0 1257 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 CENPQQ7L2Z9 268 aaPredicted RBP9.95□□□□□ -0.82
PSEN1-223ENST00000557511 PLEKHM2Q8IWE5 1019 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 TNS4Q8IZW8 715 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 BRI3BPQ8WY22 251 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 OSBP2Q969R2 916 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 CCDC136Q96JN2 1154 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 STRBPQ96SI9 672 aaKnown RBP9.95□□□□□ -0.82
PSEN1-223ENST00000557511 KCNK17Q96T54 332 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 FEZ1Q99689 392 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 EPAS1Q99814 870 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 KRTAP3-3Q9BYR6 98 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 KRTAP3-2Q9BYR7 98 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 NAPBQ9H115 298 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 HELLSQ9NRZ9 838 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 KCNH4Q9UQ05 1017 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 SALL3Q9BXA9 1300 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 DOCK2Q92608 1830 aa9.95□□□□□ -0.82
PSEN1-223ENST00000557511 MINDY4BA8MYZ0 360 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 USP17L12C9JPN9 530 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 USP17L21D6R901 530 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 IGF2BP3O00425 579 aaKnown RBP eCLIP9.94□□□□□ -0.82
PSEN1-223ENST00000557511 FKTNO75072 461 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 GDF11O95390 407 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 PTPREP23469 700 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 PLCD1P51178 756 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 SPP2Q13103 211 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 KIF22Q14807 665 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 RAB3GAP1Q15042 981 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 SLFNL1Q499Z3 407 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 MCMDC2Q4G0Z9 681 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 ZMYM1Q5SVZ6 1142 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 ANKRD23Q86SG2 305 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 METTL16Q86W50 562 aaKnown RBP9.94□□□□□ -0.82
PSEN1-223ENST00000557511 ZNF280CQ8ND82 737 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 PARK7Q99497 189 aaKnown RBP9.94□□□□□ -0.82
PSEN1-223ENST00000557511 MKNK2Q9HBH9 465 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 PNMA3Q9UL41 463 aa9.94□□□□□ -0.82
PSEN1-223ENST00000557511 C19orf81C9J6K1 198 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 BTBD19C9JJ37 291 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 USP17L10C9JJH3 530 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 M0R2C6 588 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 GPR25O00155 361 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 PDHXO00330 501 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 GH2P01242 217 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 OSBPP22059 807 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 USP14P54578 494 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 NBR1Q14596 966 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 NOM1Q5C9Z4 860 aaKnown RBP9.93□□□□□ -0.82
PSEN1-223ENST00000557511 RUFY2Q8WXA3 655 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 ERO1AQ96HE7 468 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 CCDC17Q96LX7 622 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 CFHR5Q9BXR6 569 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 SH2D4AQ9H788 454 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 ZBTB21Q9ULJ3 1066 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 AFG3L2Q9Y4W6 797 aa9.93□□□□□ -0.82
PSEN1-223ENST00000557511 A0A0G2JLL6 359 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-223ENST00000557511 CHGBP05060 677 aa9.92□□□□□ -0.82
PSEN1-223ENST00000557511 SLURP2P0DP57 97 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms