RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 GSG1L2A8MUP6 293 aa16.48■□□□□ 0.23
VPS33B-206ENST00000557358 M0R2C6 588 aa16.48■□□□□ 0.23
VPS33B-206ENST00000557358 PSMC4P43686 418 aa16.48■□□□□ 0.23
VPS33B-206ENST00000557358 PDE4BQ07343 736 aa16.48■□□□□ 0.23
VPS33B-206ENST00000557358 TREML2Q5T2D2 321 aa16.48■□□□□ 0.23
VPS33B-206ENST00000557358 PLEKHM2Q8IWE5 1019 aa16.48■□□□□ 0.23
VPS33B-206ENST00000557358 CCAR1Q8IX12 1150 aaKnown RBP16.48■□□□□ 0.23
VPS33B-206ENST00000557358 DYNLL2Q96FJ2 89 aa16.48■□□□□ 0.23
VPS33B-206ENST00000557358 OSBPL3Q9H4L5 887 aa16.48■□□□□ 0.23
VPS33B-206ENST00000557358 HPS5Q9UPZ3 1129 aa16.48■□□□□ 0.23
VPS33B-206ENST00000557358 LOC285556D6RIA3 1793 aa16.47■□□□□ 0.23
VPS33B-206ENST00000557358 HOXA7P31268 230 aaPredicted RBP16.47■□□□□ 0.23
VPS33B-206ENST00000557358 SEPT2Q15019 361 aa16.47■□□□□ 0.23
VPS33B-206ENST00000557358 ZYXQ15942 572 aaKnown RBP16.47■□□□□ 0.23
VPS33B-206ENST00000557358 MCMDC2Q4G0Z9 681 aa16.47■□□□□ 0.23
VPS33B-206ENST00000557358 IFNL3Q8IZI9 196 aa16.47■□□□□ 0.23
VPS33B-206ENST00000557358 ZNF444Q8N0Y2 327 aaPredicted RBP16.47■□□□□ 0.23
VPS33B-206ENST00000557358 SLC44A5Q8NCS7 719 aa16.47■□□□□ 0.23
VPS33B-206ENST00000557358 KIAA1683Q9H0B3 1180 aa16.47■□□□□ 0.23
VPS33B-206ENST00000557358 DIAPH3Q9NSV4 1193 aa16.47■□□□□ 0.23
VPS33B-206ENST00000557358 PTPN22Q9Y2R2 807 aa16.47■□□□□ 0.23
VPS33B-206ENST00000557358 CYP2D7A0A087X1C5 515 aa16.46■□□□□ 0.23
VPS33B-206ENST00000557358 USP17L15C9J2P7 530 aa16.46■□□□□ 0.23
VPS33B-206ENST00000557358 USP17L13C9JLJ4 530 aa16.46■□□□□ 0.23
VPS33B-206ENST00000557358 USP17L11C9JVI0 530 aa16.46■□□□□ 0.23
VPS33B-206ENST00000557358 USP17L18D6R9N7 530 aa16.46■□□□□ 0.23
VPS33B-206ENST00000557358 USP17L22D6RA61 530 aa16.46■□□□□ 0.23
VPS33B-206ENST00000557358 USP17L17D6RBQ6 530 aa16.46■□□□□ 0.23
VPS33B-206ENST00000557358 USP17L19D6RCP7 530 aa16.46■□□□□ 0.23
VPS33B-206ENST00000557358 USP17L20D6RJB6 530 aa16.46■□□□□ 0.23
VPS33B-206ENST00000557358 BCRP11274 1271 aa16.46■□□□□ 0.23
VPS33B-206ENST00000557358 JAG1P78504 1218 aa16.46■□□□□ 0.23
VPS33B-206ENST00000557358 ICA1Q05084 483 aa16.46■□□□□ 0.23
VPS33B-206ENST00000557358 USP17L24Q0WX57 530 aa16.46■□□□□ 0.23
VPS33B-206ENST00000557358 FAM110CQ1W6H9 321 aa16.46■□□□□ 0.23
VPS33B-206ENST00000557358 ANKRD13CQ8N6S4 541 aa16.46■□□□□ 0.23
VPS33B-206ENST00000557358 ASCC2Q9H1I8 757 aaPredicted RBP16.46■□□□□ 0.23
VPS33B-206ENST00000557358 KANSL2Q9H9L4 492 aa16.46■□□□□ 0.23
VPS33B-206ENST00000557358 ADGRA2Q96PE1 1338 aa16.45■□□□□ 0.22
VPS33B-206ENST00000557358 ATP2B2Q01814 1243 aa16.45■□□□□ 0.22
VPS33B-206ENST00000557358 SLC9C1Q4G0N8 1177 aa16.45■□□□□ 0.22
VPS33B-206ENST00000557358 PPP4R3BQ5MIZ7 849 aa16.45■□□□□ 0.22
VPS33B-206ENST00000557358 RAET1EQ8TD07 263 aa16.45■□□□□ 0.22
VPS33B-206ENST00000557358 COA7Q96BR5 231 aa16.45■□□□□ 0.22
VPS33B-206ENST00000557358 C12orf42Q96LP6 360 aa16.45■□□□□ 0.22
VPS33B-206ENST00000557358 SEC62Q99442 399 aaKnown RBP16.45■□□□□ 0.22
VPS33B-206ENST00000557358 CWC22Q9HCG8 908 aaKnown RBP16.45■□□□□ 0.22
VPS33B-206ENST00000557358 TNPO2O14787 897 aaKnown RBP16.44■□□□□ 0.22
VPS33B-206ENST00000557358 ECM2O94769 699 aaPredicted RBP16.44■□□□□ 0.22
VPS33B-206ENST00000557358 AKR1B1P15121 316 aa16.44■□□□□ 0.22
VPS33B-206ENST00000557358 SHROOM1Q2M3G4 852 aaPredicted RBP16.44■□□□□ 0.22
VPS33B-206ENST00000557358 STK11IPQ8N1F8 1099 aa16.44■□□□□ 0.22
VPS33B-206ENST00000557358 LPAR1Q92633 364 aa16.44■□□□□ 0.22
VPS33B-206ENST00000557358 GOPCQ9HD26 462 aa16.44■□□□□ 0.22
VPS33B-206ENST00000557358 EMILIN3Q9NT22 766 aa16.44■□□□□ 0.22
VPS33B-206ENST00000557358 HERVK_113P62684 666 aa16.43■□□□□ 0.22
VPS33B-206ENST00000557358 CCNA1P78396 465 aa16.43■□□□□ 0.22
VPS33B-206ENST00000557358 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
VPS33B-206ENST00000557358 GPRC5AQ8NFJ5 357 aa16.43■□□□□ 0.22
VPS33B-206ENST00000557358 ACER1Q8TDN7 264 aa16.43■□□□□ 0.22
VPS33B-206ENST00000557358 SRRDQ9UH36 339 aa16.43■□□□□ 0.22
VPS33B-206ENST00000557358 MYPNQ86TC9 1320 aa16.43■□□□□ 0.22
VPS33B-206ENST00000557358 ROBO3Q96MS0 1386 aa16.42■□□□□ 0.22
VPS33B-206ENST00000557358 RAD21O60216 631 aa16.42■□□□□ 0.22
VPS33B-206ENST00000557358 TSPY3P0CV98 308 aa16.42■□□□□ 0.22
VPS33B-206ENST00000557358 TSPY8P0CW00 308 aa16.42■□□□□ 0.22
VPS33B-206ENST00000557358 VCAM1P19320 739 aa16.42■□□□□ 0.22
VPS33B-206ENST00000557358 SDSP20132 328 aa16.42■□□□□ 0.22
VPS33B-206ENST00000557358 GUCY1A2P33402 732 aa16.42■□□□□ 0.22
VPS33B-206ENST00000557358 PPARAQ07869 468 aa16.42■□□□□ 0.22
VPS33B-206ENST00000557358 TRIM47Q96LD4 638 aa16.42■□□□□ 0.22
VPS33B-206ENST00000557358 TMEM106CQ9BVX2 250 aa16.42■□□□□ 0.22
VPS33B-206ENST00000557358 TANGO6Q9C0B7 1094 aa16.42■□□□□ 0.22
VPS33B-206ENST00000557358 ARHGAP39Q9C0H5 1083 aa16.42■□□□□ 0.22
VPS33B-206ENST00000557358 EPB41L4AQ9HCS5 686 aaPredicted RBP16.42■□□□□ 0.22
VPS33B-206ENST00000557358 HOXC10Q9NYD6 342 aa16.42■□□□□ 0.22
VPS33B-206ENST00000557358 CCDC171Q6TFL3 1326 aa16.42■□□□□ 0.22
VPS33B-206ENST00000557358 EVX2Q03828 476 aa16.41■□□□□ 0.22
VPS33B-206ENST00000557358 NMIQ13287 307 aaPredicted RBP16.41■□□□□ 0.22
VPS33B-206ENST00000557358 CCDC129Q6ZRS4 1044 aa16.41■□□□□ 0.22
VPS33B-206ENST00000557358 FAM227BQ96M60 508 aa16.41■□□□□ 0.22
VPS33B-206ENST00000557358 P2RX7Q99572 595 aaKnown RBP16.41■□□□□ 0.22
VPS33B-206ENST00000557358 RPAP3Q9H6T3 665 aaPredicted RBP16.41■□□□□ 0.22
VPS33B-206ENST00000557358 BIN2Q9UBW5 565 aaPredicted RBP16.41■□□□□ 0.22
VPS33B-206ENST00000557358 TMX2Q9Y320 296 aa16.41■□□□□ 0.22
VPS33B-206ENST00000557358 PTCH2Q9Y6C5 1203 aa16.41■□□□□ 0.22
VPS33B-206ENST00000557358 MGAMO43451 1857 aa16.4■□□□□ 0.22
VPS33B-206ENST00000557358 A0A0D9SFI3 127 aa16.4■□□□□ 0.22
VPS33B-206ENST00000557358 EEF2P13639 858 aaKnown RBP16.4■□□□□ 0.22
VPS33B-206ENST00000557358 RASA1P20936 1047 aa16.4■□□□□ 0.22
VPS33B-206ENST00000557358 ALX1Q15699 326 aa16.4■□□□□ 0.22
VPS33B-206ENST00000557358 CWC27Q6UX04 472 aaKnown RBP16.4■□□□□ 0.22
VPS33B-206ENST00000557358 CATSPERGQ6ZRH7 1159 aa16.4■□□□□ 0.22
VPS33B-206ENST00000557358 RUFY2Q8WXA3 655 aa16.4■□□□□ 0.22
VPS33B-206ENST00000557358 PAGR1Q9BTK6 254 aa16.4■□□□□ 0.22
VPS33B-206ENST00000557358 VCPKMTQ9H867 229 aa16.4■□□□□ 0.22
VPS33B-206ENST00000557358 TOMM22Q9NS69 142 aa16.4■□□□□ 0.22
VPS33B-206ENST00000557358 MORF4L1Q9UBU8 362 aa16.4■□□□□ 0.22
VPS33B-206ENST00000557358 RABGAP1Q9Y3P9 1069 aa16.4■□□□□ 0.22
VPS33B-206ENST00000557358 GTF3C3Q9Y5Q9 886 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms