RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.45□□□□□ -0.58
TMEM260-213ENST00000556929 ZSCAN10Q96SZ4 725 aaPredicted RBP11.45□□□□□ -0.58
TMEM260-213ENST00000556929 UBAC1Q9BSL1 405 aa11.45□□□□□ -0.58
TMEM260-213ENST00000556929 GBA2Q9HCG7 927 aaPredicted RBP11.45□□□□□ -0.58
TMEM260-213ENST00000556929 ZBTB21Q9ULJ3 1066 aa11.45□□□□□ -0.58
TMEM260-213ENST00000556929 FZD1Q9UP38 647 aa11.45□□□□□ -0.58
TMEM260-213ENST00000556929 CSADQ9Y600 493 aa11.45□□□□□ -0.58
TMEM260-213ENST00000556929 PHIPQ8WWQ0 1821 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 PLIN4Q96Q06 1357 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 PASKQ96RG2 1323 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 IFIT3O14879 490 aaKnown RBP11.44□□□□□ -0.58
TMEM260-213ENST00000556929 ST18O60284 1047 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 GH2P01242 217 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 INPP5BP32019 993 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 NEK4P51957 841 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 EXOSC10Q01780 885 aaKnown RBP11.44□□□□□ -0.58
TMEM260-213ENST00000556929 FMR1Q06787 632 aaKnown RBP eCLIP11.44□□□□□ -0.58
TMEM260-213ENST00000556929 RRP1BQ14684 758 aaKnown RBP11.44□□□□□ -0.58
TMEM260-213ENST00000556929 RAB3GAP1Q15042 981 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 NOL9Q5SY16 702 aaKnown RBP11.44□□□□□ -0.58
TMEM260-213ENST00000556929 CHST3Q7LGC8 479 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 SCYL3Q8IZE3 742 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 TMTC2Q8N394 836 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 ZKSCAN4Q969J2 545 aaPredicted RBP11.44□□□□□ -0.58
TMEM260-213ENST00000556929 TTC14Q96N46 770 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 KIF2CQ99661 725 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 ZKSCAN3Q9BRR0 538 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 TBC1D2Q9BYX2 928 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 KANSL2Q9H9L4 492 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 AS3MTQ9HBK9 375 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 PICK1Q9NRD5 415 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 PDRG1Q9NUG6 133 aa11.44□□□□□ -0.58
TMEM260-213ENST00000556929 TNKSO95271 1327 aa11.43□□□□□ -0.58
TMEM260-213ENST00000556929 CPA1P15085 419 aa11.43□□□□□ -0.58
TMEM260-213ENST00000556929 ANTXR2P58335 489 aa11.43□□□□□ -0.58
TMEM260-213ENST00000556929 WTAPQ15007 396 aa11.43□□□□□ -0.58
TMEM260-213ENST00000556929 SEPT2Q15019 361 aa11.43□□□□□ -0.58
TMEM260-213ENST00000556929 ANKRD1Q15327 319 aa11.43□□□□□ -0.58
TMEM260-213ENST00000556929 TMEM67Q5HYA8 995 aa11.43□□□□□ -0.58
TMEM260-213ENST00000556929 Q6ZUG5 572 aa11.43□□□□□ -0.58
TMEM260-213ENST00000556929 DGKHQ86XP1 1220 aa11.43□□□□□ -0.58
TMEM260-213ENST00000556929 UPF3BQ9BZI7 483 aaKnown RBP11.43□□□□□ -0.58
TMEM260-213ENST00000556929 ALDH8A1Q9H2A2 487 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-213ENST00000556929 ARHGEF10LQ9HCE6 1279 aa11.43□□□□□ -0.58
TMEM260-213ENST00000556929 STX8Q9UNK0 236 aa11.43□□□□□ -0.58
TMEM260-213ENST00000556929 IGKV6D-41A0A0C4DH26 115 aa11.42□□□□□ -0.58
TMEM260-213ENST00000556929 CCDC69A6NI79 296 aa11.42□□□□□ -0.58
TMEM260-213ENST00000556929 USP17L5A8MUK1 530 aa11.42□□□□□ -0.58
TMEM260-213ENST00000556929 UBE2Q2LH0YL09 131 aa11.42□□□□□ -0.58
TMEM260-213ENST00000556929 TTLL1O95922 423 aa11.42□□□□□ -0.58
TMEM260-213ENST00000556929 ICA1Q05084 483 aa11.42□□□□□ -0.58
TMEM260-213ENST00000556929 VGLL4Q14135 290 aa11.42□□□□□ -0.58
TMEM260-213ENST00000556929 IFIT1BQ5T764 474 aaKnown RBP11.42□□□□□ -0.58
TMEM260-213ENST00000556929 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.42□□□□□ -0.58
TMEM260-213ENST00000556929 MOB2Q70IA6 237 aa11.42□□□□□ -0.58
TMEM260-213ENST00000556929 NKX2-3Q8TAU0 364 aa11.42□□□□□ -0.58
TMEM260-213ENST00000556929 CEP95Q96GE4 821 aa11.42□□□□□ -0.58
TMEM260-213ENST00000556929 SH2D4AQ9H788 454 aa11.42□□□□□ -0.58
TMEM260-213ENST00000556929 IL17RBQ9NRM6 502 aa11.42□□□□□ -0.58
TMEM260-213ENST00000556929 MTMR4Q9NYA4 1195 aa11.42□□□□□ -0.58
TMEM260-213ENST00000556929 NYAP2Q9P242 653 aa11.42□□□□□ -0.58
TMEM260-213ENST00000556929 SH2B2O14492 632 aaPredicted RBP11.41□□□□□ -0.58
TMEM260-213ENST00000556929 NMT2O60551 498 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 EEF2P13639 858 aaKnown RBP11.41□□□□□ -0.58
TMEM260-213ENST00000556929 GUCY1A2P33402 732 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 LIFRP42702 1097 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 JAG1P78504 1218 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 ATP2B2Q01814 1243 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 LDLRAD1Q5T700 205 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 CST9Q5W186 159 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 SYNE3Q6ZMZ3 975 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 NFXL1Q6ZNB6 911 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 FBXL16Q8N461 479 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 ENAHQ8N8S7 591 aaPredicted RBP11.41□□□□□ -0.58
TMEM260-213ENST00000556929 IGDCC4Q8TDY8 1250 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 ANKS1AQ92625 1134 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 SLC10A4Q96EP9 437 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 TCEANC2Q96MN5 208 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.41□□□□□ -0.58
TMEM260-213ENST00000556929 LRRC2Q9BYS8 371 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 AGXT2Q9BYV1 514 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 KAT14Q9H8E8 782 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 ELP3Q9H9T3 547 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.41□□□□□ -0.58
TMEM260-213ENST00000556929 CLIP2Q9UDT6 1046 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 SNCAIPQ9Y6H5 919 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 PTPRFP10586 1907 aa11.41□□□□□ -0.58
TMEM260-213ENST00000556929 TMEM88BA6NKF7 163 aa11.4□□□□□ -0.58
TMEM260-213ENST00000556929 TOP1P11387 765 aaKnown RBP11.4□□□□□ -0.58
TMEM260-213ENST00000556929 PTPRAP18433 802 aa11.4□□□□□ -0.58
TMEM260-213ENST00000556929 NOVP48745 357 aa11.4□□□□□ -0.58
TMEM260-213ENST00000556929 MCM2P49736 904 aa11.4□□□□□ -0.58
TMEM260-213ENST00000556929 AK2P54819 239 aa11.4□□□□□ -0.58
TMEM260-213ENST00000556929 HUNKP57058 714 aa11.4□□□□□ -0.58
TMEM260-213ENST00000556929 PPATQ06203 517 aa11.4□□□□□ -0.58
TMEM260-213ENST00000556929 SEC23AQ15436 765 aa11.4□□□□□ -0.58
TMEM260-213ENST00000556929 SHROOM1Q2M3G4 852 aaPredicted RBP11.4□□□□□ -0.58
TMEM260-213ENST00000556929 ERO1BQ86YB8 467 aa11.4□□□□□ -0.58
TMEM260-213ENST00000556929 BRF1Q92994 677 aa11.4□□□□□ -0.58
TMEM260-213ENST00000556929 MKL1Q969V6 931 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms