RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 ENOX2Q16206 610 aaKnown RBP15.47■□□□□ 0.07
SHMT2-226ENST00000556825 SPRED3Q2MJR0 410 aa15.47■□□□□ 0.07
SHMT2-226ENST00000556825 PABPC1LQ4VXU2 614 aaKnown RBP15.47■□□□□ 0.07
SHMT2-226ENST00000556825 TTMPQ5BVD1 217 aa15.47■□□□□ 0.07
SHMT2-226ENST00000556825 NUTM2DQ5VT03 806 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-226ENST00000556825 FBXO31Q5XUX0 539 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-226ENST00000556825 TC2NQ8N9U0 490 aa15.47■□□□□ 0.07
SHMT2-226ENST00000556825 PHC3Q8NDX5 983 aa15.47■□□□□ 0.07
SHMT2-226ENST00000556825 ZSWIM6Q9HCJ5 1215 aa15.47■□□□□ 0.07
SHMT2-226ENST00000556825 HDAC6Q9UBN7 1215 aa15.47■□□□□ 0.07
SHMT2-226ENST00000556825 ADGRB1O14514 1584 aa15.47■□□□□ 0.07
SHMT2-226ENST00000556825 NUTM2FA1L443 756 aa15.46■□□□□ 0.07
SHMT2-226ENST00000556825 ABLIM1O14639 778 aa15.46■□□□□ 0.07
SHMT2-226ENST00000556825 GHRP10912 638 aa15.46■□□□□ 0.07
SHMT2-226ENST00000556825 CYP11B2P19099 503 aa15.46■□□□□ 0.07
SHMT2-226ENST00000556825 MXRA7P84157 204 aa15.46■□□□□ 0.07
SHMT2-226ENST00000556825 MTX1Q13505 466 aa15.46■□□□□ 0.07
SHMT2-226ENST00000556825 UBA5Q9GZZ9 404 aa15.46■□□□□ 0.07
SHMT2-226ENST00000556825 TMEM98Q9Y2Y6 226 aa15.46■□□□□ 0.07
SHMT2-226ENST00000556825 L3MBTL1Q9Y468 752 aa15.46■□□□□ 0.07
SHMT2-226ENST00000556825 CYP46A1Q9Y6A2 500 aa15.46■□□□□ 0.07
SHMT2-226ENST00000556825 SH3TC1Q8TE82 1336 aa15.46■□□□□ 0.06
SHMT2-226ENST00000556825 DIAPH2O60879 1101 aa15.45■□□□□ 0.06
SHMT2-226ENST00000556825 SLC35F6Q8N357 371 aa15.45■□□□□ 0.06
SHMT2-226ENST00000556825 EHBP1Q8NDI1 1231 aa15.45■□□□□ 0.06
SHMT2-226ENST00000556825 SDF4Q9BRK5 362 aa15.45■□□□□ 0.06
SHMT2-226ENST00000556825 PIDD1Q9HB75 910 aa15.45■□□□□ 0.06
SHMT2-226ENST00000556825 STAP2Q9UGK3 403 aa15.45■□□□□ 0.06
SHMT2-226ENST00000556825 WDR37Q9Y2I8 494 aa15.45■□□□□ 0.06
SHMT2-226ENST00000556825 TMEM232C9JQI7 657 aa15.45■□□□□ 0.06
SHMT2-226ENST00000556825 DESP17661 470 aa15.45■□□□□ 0.06
SHMT2-226ENST00000556825 UNC5CLQ8IV45 518 aa15.45■□□□□ 0.06
SHMT2-226ENST00000556825 PDILTQ8N807 584 aa15.45■□□□□ 0.06
SHMT2-226ENST00000556825 SLC35B4Q969S0 331 aa15.45■□□□□ 0.06
SHMT2-226ENST00000556825 ARL8AQ96BM9 186 aa15.45■□□□□ 0.06
SHMT2-226ENST00000556825 RNPC3Q96LT9 517 aaKnown RBP15.45■□□□□ 0.06
SHMT2-226ENST00000556825 CDC5LQ99459 802 aaKnown RBP15.45■□□□□ 0.06
SHMT2-226ENST00000556825 AATFQ9NY61 560 aaKnown RBP eCLIP15.45■□□□□ 0.06
SHMT2-226ENST00000556825 UTP6Q9NYH9 597 aaKnown RBP15.45■□□□□ 0.06
SHMT2-226ENST00000556825 ADGRG1Q9Y653 693 aa15.45■□□□□ 0.06
SHMT2-226ENST00000556825 TMEM131LA2VDJ0 1609 aa15.45■□□□□ 0.06
SHMT2-226ENST00000556825 QRICH2Q9H0J4 1663 aa15.45■□□□□ 0.06
SHMT2-226ENST00000556825 PENKP01210 267 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-226ENST00000556825 ATP1A2P50993 1020 aa15.44■□□□□ 0.06
SHMT2-226ENST00000556825 ALS2CLQ60I27 953 aa15.44■□□□□ 0.06
SHMT2-226ENST00000556825 AENQ8WTP8 325 aaKnown RBP15.44■□□□□ 0.06
SHMT2-226ENST00000556825 CYFIP2Q96F07 1278 aa15.44■□□□□ 0.06
SHMT2-226ENST00000556825 CWC25Q9NXE8 425 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-226ENST00000556825 FAM184BQ9ULE4 1060 aa15.44■□□□□ 0.06
SHMT2-226ENST00000556825 TMEM221A6NGB7 291 aa15.44■□□□□ 0.06
SHMT2-226ENST00000556825 VIMP08670 466 aaKnown RBP15.44■□□□□ 0.06
SHMT2-226ENST00000556825 PARP1P09874 1014 aaKnown RBP15.44■□□□□ 0.06
SHMT2-226ENST00000556825 AMPD2Q01433 879 aa15.44■□□□□ 0.06
SHMT2-226ENST00000556825 CEBPZQ03701 1054 aaKnown RBP15.44■□□□□ 0.06
SHMT2-226ENST00000556825 HIBCHQ6NVY1 386 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-226ENST00000556825 CCDC80Q76M96 950 aa15.44■□□□□ 0.06
SHMT2-226ENST00000556825 LCA5Q86VQ0 697 aa15.44■□□□□ 0.06
SHMT2-226ENST00000556825 EXOC8Q8IYI6 725 aa15.44■□□□□ 0.06
SHMT2-226ENST00000556825 TSPYL6Q8N831 410 aa15.44■□□□□ 0.06
SHMT2-226ENST00000556825 FSIP1Q8NA03 581 aa15.44■□□□□ 0.06
SHMT2-226ENST00000556825 MAIP1Q8WWC4 291 aa15.44■□□□□ 0.06
SHMT2-226ENST00000556825 ATRIPQ8WXE1 791 aa15.44■□□□□ 0.06
SHMT2-226ENST00000556825 CDK12Q9NYV4 1490 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-226ENST00000556825 ZFYVE9O95405 1425 aa15.43■□□□□ 0.06
SHMT2-226ENST00000556825 F8VZ95 297 aa15.43■□□□□ 0.06
SHMT2-226ENST00000556825 KIF5BP33176 963 aa15.43■□□□□ 0.06
SHMT2-226ENST00000556825 SEC24CP53992 1094 aa15.43■□□□□ 0.06
SHMT2-226ENST00000556825 GUCY1A3Q02108 690 aa15.43■□□□□ 0.06
SHMT2-226ENST00000556825 FMR1NBQ8N0W7 255 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-226ENST00000556825 RMDN2Q96LZ7 410 aa15.43■□□□□ 0.06
SHMT2-226ENST00000556825 ANKRD27Q96NW4 1050 aa15.43■□□□□ 0.06
SHMT2-226ENST00000556825 ATXN10Q9UBB4 475 aa15.43■□□□□ 0.06
SHMT2-226ENST00000556825 GMEB1Q9Y692 573 aa15.43■□□□□ 0.06
SHMT2-226ENST00000556825 MBD4O95243 580 aa15.43■□□□□ 0.06
SHMT2-226ENST00000556825 ADKP55263 362 aaKnown RBP15.43■□□□□ 0.06
SHMT2-226ENST00000556825 LBRQ14739 615 aaKnown RBP15.43■□□□□ 0.06
SHMT2-226ENST00000556825 NCAPH2Q6IBW4 605 aa15.43■□□□□ 0.06
SHMT2-226ENST00000556825 UBE3BQ7Z3V4 1068 aa15.43■□□□□ 0.06
SHMT2-226ENST00000556825 FAM167BQ9BTA0 163 aa15.43■□□□□ 0.06
SHMT2-226ENST00000556825 GALNT8Q9NY28 637 aa15.43■□□□□ 0.06
SHMT2-226ENST00000556825 N4BP3O15049 544 aa15.42■□□□□ 0.06
SHMT2-226ENST00000556825 VIL1P09327 827 aaKnown RBP15.42■□□□□ 0.06
SHMT2-226ENST00000556825 VCAM1P19320 739 aa15.42■□□□□ 0.06
SHMT2-226ENST00000556825 ADD1P35611 737 aaKnown RBP15.42■□□□□ 0.06
SHMT2-226ENST00000556825 PSMC4P43686 418 aa15.42■□□□□ 0.06
SHMT2-226ENST00000556825 PRPF4BQ13523 1007 aaKnown RBP15.42■□□□□ 0.06
SHMT2-226ENST00000556825 MTF1Q14872 753 aa15.42■□□□□ 0.06
SHMT2-226ENST00000556825 SMYD1Q8NB12 490 aa15.42■□□□□ 0.06
SHMT2-226ENST00000556825 FAM81BQ96LP2 452 aa15.42■□□□□ 0.06
SHMT2-226ENST00000556825 RUFY1Q96T51 708 aa15.42■□□□□ 0.06
SHMT2-226ENST00000556825 MOV10L1Q9BXT6 1211 aaKnown RBP15.42■□□□□ 0.06
SHMT2-226ENST00000556825 SLC12A5Q9H2X9 1139 aa15.42■□□□□ 0.06
SHMT2-226ENST00000556825 UBN2Q6ZU65 1347 aa15.42■□□□□ 0.06
SHMT2-226ENST00000556825 PPIP5K2O43314 1243 aa15.41■□□□□ 0.06
SHMT2-226ENST00000556825 MDH1P40925 334 aaKnown RBP15.41■□□□□ 0.06
SHMT2-226ENST00000556825 CCNG1P51959 295 aa15.41■□□□□ 0.06
SHMT2-226ENST00000556825 PPP1R7Q15435 360 aa15.41■□□□□ 0.06
SHMT2-226ENST00000556825 NBPF14Q5TI25 921 aa15.41■□□□□ 0.06
SHMT2-226ENST00000556825 RNF168Q8IYW5 571 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-226ENST00000556825 KCNV2Q8TDN2 545 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms