RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 GNAI1P63096 354 aa7.68□□□□□ -1.18
TMEM260-212ENST00000556810 PHLDB3Q6NSJ2 640 aa7.68□□□□□ -1.18
TMEM260-212ENST00000556810 KRT27Q7Z3Y8 459 aa7.68□□□□□ -1.18
TMEM260-212ENST00000556810 AEBP1Q8IUX7 1158 aa7.68□□□□□ -1.18
TMEM260-212ENST00000556810 UBASH3BQ8TF42 649 aa7.68□□□□□ -1.18
TMEM260-212ENST00000556810 CCDC136Q96JN2 1154 aa7.68□□□□□ -1.18
TMEM260-212ENST00000556810 HHIPQ96QV1 700 aa7.68□□□□□ -1.18
TMEM260-212ENST00000556810 CHMP4BQ9H444 224 aaKnown RBP7.68□□□□□ -1.18
TMEM260-212ENST00000556810 PIK3C2AO00443 1686 aa7.67□□□□□ -1.18
TMEM260-212ENST00000556810 EREGO14944 169 aa7.67□□□□□ -1.18
TMEM260-212ENST00000556810 DHX15O43143 795 aaKnown RBP7.67□□□□□ -1.18
TMEM260-212ENST00000556810 HTATSF1O43719 755 aaKnown RBP7.67□□□□□ -1.18
TMEM260-212ENST00000556810 PHACTR2O75167 634 aa7.67□□□□□ -1.18
TMEM260-212ENST00000556810 TNFRSF21O75509 655 aa7.67□□□□□ -1.18
TMEM260-212ENST00000556810 CANXP27824 592 aaKnown RBP7.67□□□□□ -1.18
TMEM260-212ENST00000556810 USP5P45974 858 aa7.67□□□□□ -1.18
TMEM260-212ENST00000556810 EHHADHQ08426 723 aa7.67□□□□□ -1.18
TMEM260-212ENST00000556810 PDE3AQ14432 1141 aa7.67□□□□□ -1.18
TMEM260-212ENST00000556810 RRS1Q15050 365 aaKnown RBP7.67□□□□□ -1.18
TMEM260-212ENST00000556810 TMEM102Q8N9M5 508 aaPredicted RBP7.67□□□□□ -1.18
TMEM260-212ENST00000556810 SNX29Q8TEQ0 813 aa7.67□□□□□ -1.18
TMEM260-212ENST00000556810 RTF1Q92541 710 aaKnown RBP7.67□□□□□ -1.18
TMEM260-212ENST00000556810 OSGEPQ9NPF4 335 aa7.67□□□□□ -1.18
TMEM260-212ENST00000556810 ARHGEF10O15013 1369 aa7.67□□□□□ -1.18
TMEM260-212ENST00000556810 IPO8O15397 1037 aaKnown RBP7.66□□□□□ -1.18
TMEM260-212ENST00000556810 FZD6O60353 706 aa7.66□□□□□ -1.18
TMEM260-212ENST00000556810 ABL1P00519 1130 aa7.66□□□□□ -1.18
TMEM260-212ENST00000556810 FKBP4Q02790 459 aaKnown RBP eCLIP7.66□□□□□ -1.18
TMEM260-212ENST00000556810 UVSSAQ2YD98 709 aa7.66□□□□□ -1.18
TMEM260-212ENST00000556810 ARMC10Q8N2F6 343 aa7.66□□□□□ -1.18
TMEM260-212ENST00000556810 OSMRQ99650 979 aa7.66□□□□□ -1.18
TMEM260-212ENST00000556810 SOX13Q9UN79 622 aa7.66□□□□□ -1.18
TMEM260-212ENST00000556810 MAP3K19Q56UN5 1328 aa7.66□□□□□ -1.18
TMEM260-212ENST00000556810 LTN1O94822 1766 aa7.66□□□□□ -1.18
TMEM260-212ENST00000556810 DLG5Q8TDM6 1919 aa7.66□□□□□ -1.18
TMEM260-212ENST00000556810 GSC2O15499 205 aa7.65□□□□□ -1.18
TMEM260-212ENST00000556810 LRP5O75197 1615 aa7.65□□□□□ -1.18
TMEM260-212ENST00000556810 HMOX1P09601 288 aa7.65□□□□□ -1.18
TMEM260-212ENST00000556810 EDN3P14138 238 aa7.65□□□□□ -1.18
TMEM260-212ENST00000556810 EIF4A2Q14240 407 aaKnown RBP7.65□□□□□ -1.18
TMEM260-212ENST00000556810 ALDH1L2Q3SY69 923 aa7.65□□□□□ -1.18
TMEM260-212ENST00000556810 PLCH1Q4KWH8 1693 aa7.65□□□□□ -1.18
TMEM260-212ENST00000556810 SULT6B1Q6IMI4 303 aa7.65□□□□□ -1.18
TMEM260-212ENST00000556810 SLC7A3Q8WY07 619 aa7.65□□□□□ -1.18
TMEM260-212ENST00000556810 IP6K1Q92551 441 aa7.65□□□□□ -1.18
TMEM260-212ENST00000556810 UTP4Q969X6 686 aaKnown RBP7.65□□□□□ -1.18
TMEM260-212ENST00000556810 NXPE3Q969Y0 559 aa7.65□□□□□ -1.18
TMEM260-212ENST00000556810 FAM46AQ96IP4 442 aaKnown RBP7.65□□□□□ -1.18
TMEM260-212ENST00000556810 ZKSCAN3Q9BRR0 538 aa7.65□□□□□ -1.18
TMEM260-212ENST00000556810 IFT57Q9NWB7 429 aa7.65□□□□□ -1.18
TMEM260-212ENST00000556810 PHRF1Q9P1Y6 1649 aaKnown RBP7.65□□□□□ -1.18
TMEM260-212ENST00000556810 STOML1Q9UBI4 398 aa7.65□□□□□ -1.18
TMEM260-212ENST00000556810 FOXD3Q9UJU5 478 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-212ENST00000556810 NWD2Q9ULI1 1742 aa7.65□□□□□ -1.18
TMEM260-212ENST00000556810 RRP7AQ9Y3A4 280 aaKnown RBP7.65□□□□□ -1.18
TMEM260-212ENST00000556810 TNS3Q68CZ2 1445 aa7.64□□□□□ -1.19
TMEM260-212ENST00000556810 KIF16BQ96L93 1317 aa7.64□□□□□ -1.19
TMEM260-212ENST00000556810 ARL4DP49703 201 aa7.64□□□□□ -1.19
TMEM260-212ENST00000556810 NLRP12P59046 1061 aa7.64□□□□□ -1.19
TMEM260-212ENST00000556810 IRX6P78412 446 aaPredicted RBP7.64□□□□□ -1.19
TMEM260-212ENST00000556810 ZNF211Q13398 564 aaPredicted RBP7.64□□□□□ -1.19
TMEM260-212ENST00000556810 HSP90AB2PQ58FF8 381 aa7.64□□□□□ -1.19
TMEM260-212ENST00000556810 KRTAP4-8Q9BYQ9 185 aa7.64□□□□□ -1.19
TMEM260-212ENST00000556810 ANO2Q9NQ90 1003 aa7.64□□□□□ -1.19
TMEM260-212ENST00000556810 BABAM1Q9NWV8 329 aa7.64□□□□□ -1.19
TMEM260-212ENST00000556810 BTG4Q9NY30 223 aa7.64□□□□□ -1.19
TMEM260-212ENST00000556810 RGPD1P0DJD0 1748 aa7.64□□□□□ -1.19
TMEM260-212ENST00000556810 PLEKHG2Q9H7P9 1386 aa7.63□□□□□ -1.19
TMEM260-212ENST00000556810 SOS1Q07889 1333 aaPredicted RBP7.63□□□□□ -1.19
TMEM260-212ENST00000556810 IGLV1-40P01703 118 aa7.63□□□□□ -1.19
TMEM260-212ENST00000556810 GCP02774 474 aa7.63□□□□□ -1.19
TMEM260-212ENST00000556810 HOXC9P31274 260 aa7.63□□□□□ -1.19
TMEM260-212ENST00000556810 PDE4CQ08493 712 aa7.63□□□□□ -1.19
TMEM260-212ENST00000556810 C19orf57Q0VDD7 668 aa7.63□□□□□ -1.19
TMEM260-212ENST00000556810 R3HDM1Q15032 1099 aaKnown RBP7.63□□□□□ -1.19
TMEM260-212ENST00000556810 AMOTQ4VCS5 1084 aa7.63□□□□□ -1.19
TMEM260-212ENST00000556810 GJD3Q8N144 294 aa7.63□□□□□ -1.19
TMEM260-212ENST00000556810 BSNDQ8WZ55 320 aa7.63□□□□□ -1.19
TMEM260-212ENST00000556810 PSMG3-AS1Q96PY0 264 aa7.63□□□□□ -1.19
TMEM260-212ENST00000556810 RNF208Q9H0X6 261 aa7.63□□□□□ -1.19
TMEM260-212ENST00000556810 CCDC87Q9NVE4 849 aa7.63□□□□□ -1.19
TMEM260-212ENST00000556810 USTQ9Y2C2 406 aa7.63□□□□□ -1.19
TMEM260-212ENST00000556810 ABCA3Q99758 1704 aa7.63□□□□□ -1.19
TMEM260-212ENST00000556810 KDRP35968 1356 aa7.62□□□□□ -1.19
TMEM260-212ENST00000556810 IGSF1Q8N6C5 1336 aa7.62□□□□□ -1.19
TMEM260-212ENST00000556810 TRPM3Q9HCF6 1732 aaPredicted RBP7.62□□□□□ -1.19
TMEM260-212ENST00000556810 FBLN1P23142 703 aa7.62□□□□□ -1.19
TMEM260-212ENST00000556810 RARSP54136 660 aaKnown RBP7.62□□□□□ -1.19
TMEM260-212ENST00000556810 HGSNATQ68CP4 663 aa7.62□□□□□ -1.19
TMEM260-212ENST00000556810 ANKRD34AQ69YU3 496 aa7.62□□□□□ -1.19
TMEM260-212ENST00000556810 MYRFLQ96LU7 910 aa7.62□□□□□ -1.19
TMEM260-212ENST00000556810 RUSC1Q9BVN2 902 aa7.62□□□□□ -1.19
TMEM260-212ENST00000556810 CACNA1FO60840 1977 aa7.62□□□□□ -1.19
TMEM260-212ENST00000556810 SLIT3O75094 1523 aa7.62□□□□□ -1.19
TMEM260-212ENST00000556810 ABCC6O95255 1503 aa7.62□□□□□ -1.19
TMEM260-212ENST00000556810 PEAK1Q9H792 1746 aa7.61□□□□□ -1.19
TMEM260-212ENST00000556810 FAM208AQ9UK61 1670 aaKnown RBP7.61□□□□□ -1.19
TMEM260-212ENST00000556810 FANCIQ9NVI1 1328 aa7.61□□□□□ -1.19
TMEM260-212ENST00000556810 SART1O43290 800 aaKnown RBP7.61□□□□□ -1.19
TMEM260-212ENST00000556810 IKBKEQ14164 716 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms