RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 PARK7Q99497 189 aaKnown RBP12.82□□□□□ -0.36
GABRB3-211ENST00000556636 ARHGAP39Q9C0H5 1083 aa12.82□□□□□ -0.36
GABRB3-211ENST00000556636 KIAA1683Q9H0B3 1180 aa12.82□□□□□ -0.36
GABRB3-211ENST00000556636 ASCC2Q9H1I8 757 aaPredicted RBP12.82□□□□□ -0.36
GABRB3-211ENST00000556636 TACC3Q9Y6A5 838 aa12.82□□□□□ -0.36
GABRB3-211ENST00000556636 MPHOSPH10O00566 681 aaKnown RBP12.81□□□□□ -0.36
GABRB3-211ENST00000556636 TDO2P48775 406 aa12.81□□□□□ -0.36
GABRB3-211ENST00000556636 LACTBP83111 547 aaPredicted RBP12.81□□□□□ -0.36
GABRB3-211ENST00000556636 KIAA1755Q5JYT7 1200 aa12.81□□□□□ -0.36
GABRB3-211ENST00000556636 USP17L2Q6R6M4 530 aa12.81□□□□□ -0.36
GABRB3-211ENST00000556636 CLEC10AQ8IUN9 316 aa12.81□□□□□ -0.36
GABRB3-211ENST00000556636 STK11IPQ8N1F8 1099 aa12.81□□□□□ -0.36
GABRB3-211ENST00000556636 P2RX7Q99572 595 aaKnown RBP12.81□□□□□ -0.36
GABRB3-211ENST00000556636 TRIM17Q9Y577 477 aa12.81□□□□□ -0.36
GABRB3-211ENST00000556636 ROBO3Q96MS0 1386 aa12.81□□□□□ -0.36
GABRB3-211ENST00000556636 NAV1Q8NEY1 1877 aa12.8□□□□□ -0.36
GABRB3-211ENST00000556636 BAZ2AQ9UIF9 1905 aaKnown RBP12.8□□□□□ -0.36
GABRB3-211ENST00000556636 FGAP02671 866 aa12.8□□□□□ -0.36
GABRB3-211ENST00000556636 HSPD1P10809 573 aaKnown RBP12.8□□□□□ -0.36
GABRB3-211ENST00000556636 PPARAQ07869 468 aa12.8□□□□□ -0.36
GABRB3-211ENST00000556636 FBXO46Q6PJ61 603 aaPredicted RBP12.8□□□□□ -0.36
GABRB3-211ENST00000556636 NACAP1Q9BZK3 213 aa12.8□□□□□ -0.36
GABRB3-211ENST00000556636 NAPBQ9H115 298 aa12.8□□□□□ -0.36
GABRB3-211ENST00000556636 EFCC1Q9HA90 598 aa12.8□□□□□ -0.36
GABRB3-211ENST00000556636 INCENPQ9NQS7 918 aa12.8□□□□□ -0.36
GABRB3-211ENST00000556636 TMOD4Q9NZQ9 345 aa12.8□□□□□ -0.36
GABRB3-211ENST00000556636 PTPRFP10586 1907 aa12.8□□□□□ -0.36
GABRB3-211ENST00000556636 HTTP42858 3142 aa12.79□□□□□ -0.36
GABRB3-211ENST00000556636 IGKV6D-41A0A0C4DH26 115 aa12.79□□□□□ -0.36
GABRB3-211ENST00000556636 OSBPP22059 807 aa12.79□□□□□ -0.36
GABRB3-211ENST00000556636 USP14P54578 494 aa12.79□□□□□ -0.36
GABRB3-211ENST00000556636 ZYXQ15942 572 aaKnown RBP12.79□□□□□ -0.36
GABRB3-211ENST00000556636 CWC27Q6UX04 472 aaKnown RBP12.79□□□□□ -0.36
GABRB3-211ENST00000556636 SKAP1Q86WV1 359 aa12.79□□□□□ -0.36
GABRB3-211ENST00000556636 IL25Q9H293 177 aa12.79□□□□□ -0.36
GABRB3-211ENST00000556636 ANAPC4Q9UJX5 808 aa12.79□□□□□ -0.36
GABRB3-211ENST00000556636 PTPN22Q9Y2R2 807 aa12.79□□□□□ -0.36
GABRB3-211ENST00000556636 TMX2Q9Y320 296 aa12.79□□□□□ -0.36
GABRB3-211ENST00000556636 ATAD5Q96QE3 1844 aa12.78□□□□□ -0.36
GABRB3-211ENST00000556636 PEX10O60683 326 aa12.78□□□□□ -0.36
GABRB3-211ENST00000556636 PRDM1O75626 825 aa12.78□□□□□ -0.36
GABRB3-211ENST00000556636 FGRP09769 529 aa12.78□□□□□ -0.36
GABRB3-211ENST00000556636 EEF2P13639 858 aaKnown RBP12.78□□□□□ -0.36
GABRB3-211ENST00000556636 VCAM1P19320 739 aa12.78□□□□□ -0.36
GABRB3-211ENST00000556636 PSMC4P43686 418 aa12.78□□□□□ -0.36
GABRB3-211ENST00000556636 PABPC4Q13310 644 aaKnown RBP eCLIP12.78□□□□□ -0.36
GABRB3-211ENST00000556636 CATSPERGQ6ZRH7 1159 aa12.78□□□□□ -0.36
GABRB3-211ENST00000556636 CENPQQ7L2Z9 268 aaPredicted RBP12.78□□□□□ -0.36
GABRB3-211ENST00000556636 ANKRD13CQ8N6S4 541 aa12.78□□□□□ -0.36
GABRB3-211ENST00000556636 SMCR8Q8TEV9 937 aaPredicted RBP12.78□□□□□ -0.36
GABRB3-211ENST00000556636 TRIM47Q96LD4 638 aa12.78□□□□□ -0.36
GABRB3-211ENST00000556636 KANSL2Q9H9L4 492 aa12.78□□□□□ -0.36
GABRB3-211ENST00000556636 MKNK2Q9HBH9 465 aa12.78□□□□□ -0.36
GABRB3-211ENST00000556636 RBPJLQ9UBG7 517 aa12.78□□□□□ -0.36
GABRB3-211ENST00000556636 PNMA3Q9UL41 463 aa12.78□□□□□ -0.36
GABRB3-211ENST00000556636 HPS5Q9UPZ3 1129 aa12.78□□□□□ -0.36
GABRB3-211ENST00000556636 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.78□□□□□ -0.36
GABRB3-211ENST00000556636 CCDC171Q6TFL3 1326 aa12.78□□□□□ -0.36
GABRB3-211ENST00000556636 USP17L15C9J2P7 530 aa12.77□□□□□ -0.37
GABRB3-211ENST00000556636 USP17L13C9JLJ4 530 aa12.77□□□□□ -0.37
GABRB3-211ENST00000556636 USP17L11C9JVI0 530 aa12.77□□□□□ -0.37
GABRB3-211ENST00000556636 USP17L18D6R9N7 530 aa12.77□□□□□ -0.37
GABRB3-211ENST00000556636 USP17L22D6RA61 530 aa12.77□□□□□ -0.37
GABRB3-211ENST00000556636 USP17L17D6RBQ6 530 aa12.77□□□□□ -0.37
GABRB3-211ENST00000556636 USP17L19D6RCP7 530 aa12.77□□□□□ -0.37
GABRB3-211ENST00000556636 USP17L20D6RJB6 530 aa12.77□□□□□ -0.37
GABRB3-211ENST00000556636 HIP1O00291 1037 aa12.77□□□□□ -0.37
GABRB3-211ENST00000556636 ECM2O94769 699 aaPredicted RBP12.77□□□□□ -0.37
GABRB3-211ENST00000556636 GCLCP48506 637 aaPredicted RBP12.77□□□□□ -0.37
GABRB3-211ENST00000556636 HERVK_113P62684 666 aa12.77□□□□□ -0.37
GABRB3-211ENST00000556636 ICA1Q05084 483 aa12.77□□□□□ -0.37
GABRB3-211ENST00000556636 CTDSPL2Q05D32 466 aa12.77□□□□□ -0.37
GABRB3-211ENST00000556636 USP17L24Q0WX57 530 aa12.77□□□□□ -0.37
GABRB3-211ENST00000556636 Q3C1V9 767 aa12.77□□□□□ -0.37
GABRB3-211ENST00000556636 ZNF444Q8N0Y2 327 aaPredicted RBP12.77□□□□□ -0.37
GABRB3-211ENST00000556636 FEZ1Q99689 392 aa12.77□□□□□ -0.37
GABRB3-211ENST00000556636 TXNRD2Q9NNW7 524 aa12.77□□□□□ -0.37
GABRB3-211ENST00000556636 CAPN15O75808 1086 aa12.76□□□□□ -0.37
GABRB3-211ENST00000556636 GNRH1P01148 92 aa12.76□□□□□ -0.37
GABRB3-211ENST00000556636 CHMLP26374 656 aa12.76□□□□□ -0.37
GABRB3-211ENST00000556636 IRX3P78415 501 aaPredicted RBP12.76□□□□□ -0.37
GABRB3-211ENST00000556636 KIF22Q14807 665 aa12.76□□□□□ -0.37
GABRB3-211ENST00000556636 ARHGEF6Q15052 776 aa12.76□□□□□ -0.37
GABRB3-211ENST00000556636 FAM110CQ1W6H9 321 aa12.76□□□□□ -0.37
GABRB3-211ENST00000556636 NEDD1Q8NHV4 660 aa12.76□□□□□ -0.37
GABRB3-211ENST00000556636 NKX2-3Q8TAU0 364 aa12.76□□□□□ -0.37
GABRB3-211ENST00000556636 MKL1Q969V6 931 aa12.76□□□□□ -0.37
GABRB3-211ENST00000556636 NBPF3Q9H094 633 aa12.76□□□□□ -0.37
GABRB3-211ENST00000556636 VCPKMTQ9H867 229 aa12.76□□□□□ -0.37
GABRB3-211ENST00000556636 DIAPH3Q9NSV4 1193 aa12.76□□□□□ -0.37
GABRB3-211ENST00000556636 NYAP2Q9P242 653 aa12.76□□□□□ -0.37
GABRB3-211ENST00000556636 MORF4L1Q9UBU8 362 aa12.76□□□□□ -0.37
GABRB3-211ENST00000556636 CCDC85CA6NKD9 419 aa12.75□□□□□ -0.37
GABRB3-211ENST00000556636 LOC285556D6RIA3 1793 aa12.75□□□□□ -0.37
GABRB3-211ENST00000556636 CNMDO75829 334 aa12.75□□□□□ -0.37
GABRB3-211ENST00000556636 ZMYM6O95789 1325 aa12.75□□□□□ -0.37
GABRB3-211ENST00000556636 TFAP4Q01664 338 aa12.75□□□□□ -0.37
GABRB3-211ENST00000556636 PDE4BQ07343 736 aa12.75□□□□□ -0.37
GABRB3-211ENST00000556636 FAM47AQ5JRC9 791 aa12.75□□□□□ -0.37
GABRB3-211ENST00000556636 LBX2Q6XYB7 198 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms