RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 SYNE3Q6ZMZ3 975 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 VPS37DQ86XT2 251 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 KCNH5Q8NCM2 988 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 LRRC59Q96AG4 307 aaKnown RBP9.68□□□□□ -0.86
MARK3-210ENST00000556463 MYD88Q99836 296 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 ABCB6Q9NP58 842 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 MED4Q9NPJ6 270 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 RGPD5Q99666 1765 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 ALS2Q96Q42 1657 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 SHOX2O60902 331 aaPredicted RBP9.68□□□□□ -0.86
MARK3-210ENST00000556463 ERCC5P28715 1186 aaPredicted RBP9.68□□□□□ -0.86
MARK3-210ENST00000556463 AKAP17AQ02040 695 aaKnown RBP9.68□□□□□ -0.86
MARK3-210ENST00000556463 COPS6Q7L5N1 327 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 CD248Q9HCU0 757 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 KCNH3Q9ULD8 1083 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 UBR2Q8IWV8 1755 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 TIAM2Q8IVF5 1701 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 SH2B2O14492 632 aaPredicted RBP9.68□□□□□ -0.86
MARK3-210ENST00000556463 PRC1O43663 620 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 AP1G2O75843 785 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 CIAO1O76071 339 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 CCDC175P0C221 793 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 MARCKSP29966 332 aaPredicted RBP9.68□□□□□ -0.86
MARK3-210ENST00000556463 CDKAL1Q5VV42 579 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 CCDC102BQ68D86 513 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 ANKRD13DQ6ZTN6 518 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 SUGP1Q8IWZ8 645 aaKnown RBP9.68□□□□□ -0.86
MARK3-210ENST00000556463 JMYQ8N9B5 988 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 ZNF579Q8NAF0 562 aaKnown RBP9.68□□□□□ -0.86
MARK3-210ENST00000556463 NKX2-3Q8TAU0 364 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 PICK1Q9NRD5 415 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 FAM217BQ9NTX9 383 aaPredicted RBP9.68□□□□□ -0.86
MARK3-210ENST00000556463 ITIH6Q6UXX5 1313 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 KLF18A0A0U1RQI7 1052 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 A0A0U1RQJ8 604 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 FOXN1O15353 648 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 FGAP02671 866 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 HNRNPH1P31943 449 aaKnown RBP9.67□□□□□ -0.86
MARK3-210ENST00000556463 KARSQ15046 597 aaKnown RBP9.67□□□□□ -0.86
MARK3-210ENST00000556463 CPLX2Q6PUV4 134 aaKnown RBP9.67□□□□□ -0.86
MARK3-210ENST00000556463 OLFM4Q6UX06 510 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 ATRIPQ8WXE1 791 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 SOWAHDA6NJG2 315 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 SYF2O95926 243 aaKnown RBP9.67□□□□□ -0.86
MARK3-210ENST00000556463 ARHGAP25P42331 645 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 VSNL1P62760 191 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 FAM69CQ0P6D2 419 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 CASP8Q14790 479 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 NUTM2AQ8IVF1 878 aaPredicted RBP9.67□□□□□ -0.86
MARK3-210ENST00000556463 CLIC6Q96NY7 704 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 TRIM6Q9C030 488 aaPredicted RBP9.67□□□□□ -0.86
MARK3-210ENST00000556463 MYO1AQ9UBC5 1043 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 NFE2L3Q9Y4A8 694 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 STK36Q9NRP7 1315 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 AIMP1Q12904 312 aaKnown RBP9.67□□□□□ -0.86
MARK3-210ENST00000556463 CUL4BQ13620 913 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 C1orf141Q5JVX7 400 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 KRT40Q6A162 431 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 CCDC12Q8WUD4 166 aaPredicted RBP9.67□□□□□ -0.86
MARK3-210ENST00000556463 THOC1Q96FV9 657 aaKnown RBP9.67□□□□□ -0.86
MARK3-210ENST00000556463 DESI2Q9BSY9 194 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 SLC52A2Q9HAB3 445 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 SUGCTQ9HAC7 445 aa9.67□□□□□ -0.86
MARK3-210ENST00000556463 FBXO2Q9UK22 296 aaPredicted RBP9.67□□□□□ -0.86
MARK3-210ENST00000556463 LRRC10BA6NIK2 292 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 LRRIQ3A6PVS8 624 aaPredicted RBP9.66□□□□□ -0.86
MARK3-210ENST00000556463 GOLGA8BA8MQT2 603 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 AKR1B15C9JRZ8 316 aaPredicted RBP9.66□□□□□ -0.86
MARK3-210ENST00000556463 ACTN4O43707 911 aaKnown RBP9.66□□□□□ -0.86
MARK3-210ENST00000556463 MYBL1P10243 752 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 PTPREP23469 700 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 TOB1P50616 345 aaPredicted RBP9.66□□□□□ -0.86
MARK3-210ENST00000556463 WHAMMP3Q1A5X7 153 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 SH3RF1Q7Z6J0 888 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 ANKRD18AQ8IVF6 992 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 ZBTB10Q96DT7 871 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 PAIP2Q9BPZ3 127 aaKnown RBP9.66□□□□□ -0.86
MARK3-210ENST00000556463 SEC31BQ9NQW1 1179 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 ADD3Q9UEY8 706 aaKnown RBP9.66□□□□□ -0.86
MARK3-210ENST00000556463 KIF13AQ9H1H9 1805 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 A0A087WUV0 522 aaPredicted RBP9.66□□□□□ -0.86
MARK3-210ENST00000556463 IL15P40933 162 aaPredicted RBP9.66□□□□□ -0.86
MARK3-210ENST00000556463 PLCD1P51178 756 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 POSTNQ15063 836 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 SWT1Q5T5J6 900 aaKnown RBP9.66□□□□□ -0.86
MARK3-210ENST00000556463 EFCAB13Q8IY85 973 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 OTUD6BQ8N6M0 293 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 AIFM3Q96NN9 605 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 POLD4Q9HCU8 107 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 COL18A1P39060 1754 aa9.66□□□□□ -0.86
MARK3-210ENST00000556463 SHTN1A0MZ66 631 aa9.65□□□□□ -0.86
MARK3-210ENST00000556463 SPDYE2BA6NHP3 402 aa9.65□□□□□ -0.86
MARK3-210ENST00000556463 ZEB2O60315 1214 aa9.65□□□□□ -0.86
MARK3-210ENST00000556463 SPDYE6P0CI01 402 aa9.65□□□□□ -0.86
MARK3-210ENST00000556463 SPDYE2Q495Y8 402 aa9.65□□□□□ -0.86
MARK3-210ENST00000556463 NCOA7Q8NI08 942 aa9.65□□□□□ -0.86
MARK3-210ENST00000556463 CCDC51Q96ER9 411 aa9.65□□□□□ -0.86
MARK3-210ENST00000556463 FAM204AQ9H8W3 233 aa9.65□□□□□ -0.86
MARK3-210ENST00000556463 PAPPAQ13219 1627 aa9.65□□□□□ -0.86
MARK3-210ENST00000556463 PPP1R12BO60237 982 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms