RNA–Protein interactions for RNA: ENST00000556360.1

PCNX4-212, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-212ENST00000556360 RAC2P15153 192 aa8.04□□□□□ -1.12
PCNX4-212ENST00000556360 LCNL1Q6ZST4 164 aa8.04□□□□□ -1.12
PCNX4-212ENST00000556360 LRRC56Q8IYG6 542 aaPredicted RBP8.04□□□□□ -1.12
PCNX4-212ENST00000556360 ABHD4Q8TB40 342 aa8.04□□□□□ -1.12
PCNX4-212ENST00000556360 PPP1R13LQ8WUF5 828 aa8.04□□□□□ -1.12
PCNX4-212ENST00000556360 DUSP9Q99956 384 aaKnown RBP8.04□□□□□ -1.12
PCNX4-212ENST00000556360 NOC4LQ9BVI4 516 aaKnown RBP8.04□□□□□ -1.12
PCNX4-212ENST00000556360 DUSP15Q9H1R2 295 aaPredicted RBP8.04□□□□□ -1.12
PCNX4-212ENST00000556360 NSUN3Q9H649 340 aaKnown RBP8.04□□□□□ -1.12
PCNX4-212ENST00000556360 PATL2C9JE40 543 aaKnown RBP8.03□□□□□ -1.12
PCNX4-212ENST00000556360 C1QTNF9P0C862 333 aa8.03□□□□□ -1.12
PCNX4-212ENST00000556360 ST13P50502 369 aaKnown RBP8.03□□□□□ -1.12
PCNX4-212ENST00000556360 RALGPS1Q5JS13 557 aa8.03□□□□□ -1.12
PCNX4-212ENST00000556360 CCDC84Q86UT8 332 aaPredicted RBP8.03□□□□□ -1.12
PCNX4-212ENST00000556360 ANKLE2Q86XL3 938 aa8.03□□□□□ -1.12
PCNX4-212ENST00000556360 ZSCAN18Q8TBC5 510 aaPredicted RBP8.03□□□□□ -1.12
PCNX4-212ENST00000556360 TRAIPQ9BWF2 469 aa8.03□□□□□ -1.12
PCNX4-212ENST00000556360 GPR62Q9BZJ7 368 aa8.03□□□□□ -1.12
PCNX4-212ENST00000556360 RNF19AQ9NV58 838 aa8.03□□□□□ -1.12
PCNX4-212ENST00000556360 CEP131Q9UPN4 1083 aa8.03□□□□□ -1.12
PCNX4-212ENST00000556360 KRTAP9-7A8MTY7 169 aa8.02□□□□□ -1.13
PCNX4-212ENST00000556360 MED14OSP0DP75 135 aa8.02□□□□□ -1.13
PCNX4-212ENST00000556360 MEI1Q5TIA1 1274 aa8.02□□□□□ -1.13
PCNX4-212ENST00000556360 CYB5D2Q8WUJ1 264 aa8.02□□□□□ -1.13
PCNX4-212ENST00000556360 DIRC2Q96SL1 478 aa8.02□□□□□ -1.13
PCNX4-212ENST00000556360 TRIT1Q9H3H1 467 aaKnown RBP8.02□□□□□ -1.13
PCNX4-212ENST00000556360 SP110Q9HB58 689 aa8.02□□□□□ -1.13
PCNX4-212ENST00000556360 NFIBO00712 420 aa8.01□□□□□ -1.13
PCNX4-212ENST00000556360 MAP3K11Q16584 847 aa8.01□□□□□ -1.13
PCNX4-212ENST00000556360 EAPPQ56P03 285 aaPredicted RBP8.01□□□□□ -1.13
PCNX4-212ENST00000556360 TMEM201Q5SNT2 666 aa8.01□□□□□ -1.13
PCNX4-212ENST00000556360 EPB41L4BQ9H329 900 aa8.01□□□□□ -1.13
PCNX4-212ENST00000556360 CD320Q9NPF0 282 aa8.01□□□□□ -1.13
PCNX4-212ENST00000556360 WASH4PA8MWX3 477 aa8□□□□□ -1.13
PCNX4-212ENST00000556360 CREG2Q8IUH2 290 aa8□□□□□ -1.13
PCNX4-212ENST00000556360 DTWD2Q8NBA8 298 aa8□□□□□ -1.13
PCNX4-212ENST00000556360 PHC3Q8NDX5 983 aa8□□□□□ -1.13
PCNX4-212ENST00000556360 MYLIPQ8WY64 445 aa8□□□□□ -1.13
PCNX4-212ENST00000556360 ADAMTS10Q9H324 1103 aa8□□□□□ -1.13
PCNX4-212ENST00000556360 GLDCP23378 1020 aa7.99□□□□□ -1.13
PCNX4-212ENST00000556360 TPP2P29144 1249 aaPredicted RBP7.99□□□□□ -1.13
PCNX4-212ENST00000556360 ERVFC1P60507 584 aa7.99□□□□□ -1.13
PCNX4-212ENST00000556360 AMIGO3Q86WK7 504 aa7.99□□□□□ -1.13
PCNX4-212ENST00000556360 DCP1AQ9NPI6 582 aaPredicted RBP7.99□□□□□ -1.13
PCNX4-212ENST00000556360 TLR6Q9Y2C9 796 aa7.99□□□□□ -1.13
PCNX4-212ENST00000556360 ANKRD33BA6NCL7 494 aa7.98□□□□□ -1.13
PCNX4-212ENST00000556360 CILPO75339 1184 aa7.98□□□□□ -1.13
PCNX4-212ENST00000556360 HK2P52789 917 aa7.98□□□□□ -1.13
PCNX4-212ENST00000556360 DAB2P98082 770 aa7.98□□□□□ -1.13
PCNX4-212ENST00000556360 TAF1CQ15572 869 aaPredicted RBP7.98□□□□□ -1.13
PCNX4-212ENST00000556360 TSPYL5Q86VY4 417 aaPredicted RBP7.98□□□□□ -1.13
PCNX4-212ENST00000556360 SLFN12Q8IYM2 578 aa7.98□□□□□ -1.13
PCNX4-212ENST00000556360 GPATCH2Q9NW75 528 aa7.98□□□□□ -1.13
PCNX4-212ENST00000556360 PRR36Q9H6K5 1346 aa7.98□□□□□ -1.13
PCNX4-212ENST00000556360 FAM221AA4D161 298 aa7.97□□□□□ -1.13
PCNX4-212ENST00000556360 ZGLP1P0C6A0 271 aa7.97□□□□□ -1.13
PCNX4-212ENST00000556360 ZSCAN22P10073 491 aaPredicted RBP7.97□□□□□ -1.13
PCNX4-212ENST00000556360 PDZD8Q8NEN9 1154 aa7.97□□□□□ -1.13
PCNX4-212ENST00000556360 RNF141Q8WVD5 230 aa7.97□□□□□ -1.13
PCNX4-212ENST00000556360 SLC26A8Q96RN1 970 aa7.97□□□□□ -1.13
PCNX4-212ENST00000556360 RAPGEFL1Q9UHV5 662 aa7.97□□□□□ -1.13
PCNX4-212ENST00000556360 DUSP13Q9UII6 198 aa7.97□□□□□ -1.13
PCNX4-212ENST00000556360 CORINQ9Y5Q5 1042 aa7.97□□□□□ -1.13
PCNX4-212ENST00000556360 USP31Q70CQ4 1352 aa7.97□□□□□ -1.13
PCNX4-212ENST00000556360 CTSHP09668 335 aa7.96□□□□□ -1.14
PCNX4-212ENST00000556360 TMEM253P0C7T8 217 aa7.96□□□□□ -1.14
PCNX4-212ENST00000556360 PLCG1P19174 1290 aa7.96□□□□□ -1.14
PCNX4-212ENST00000556360 YARSP54577 528 aaKnown RBP7.96□□□□□ -1.14
PCNX4-212ENST00000556360 LMNB2Q03252 620 aa7.96□□□□□ -1.14
PCNX4-212ENST00000556360 NR0B2Q15466 257 aa7.96□□□□□ -1.14
PCNX4-212ENST00000556360 LILRA2Q8N149 483 aa7.96□□□□□ -1.14
PCNX4-212ENST00000556360 KRTAP4-2Q9BYR5 136 aa7.96□□□□□ -1.14
PCNX4-212ENST00000556360 PARP2Q9UGN5 583 aa7.96□□□□□ -1.14
PCNX4-212ENST00000556360 KCNH3Q9ULD8 1083 aa7.96□□□□□ -1.14
PCNX4-212ENST00000556360 EGR3Q06889 387 aa7.95□□□□□ -1.14
PCNX4-212ENST00000556360 KCNA10Q16322 511 aa7.95□□□□□ -1.14
PCNX4-212ENST00000556360 SND1Q7KZF4 910 aaKnown RBP eCLIP7.95□□□□□ -1.14
PCNX4-212ENST00000556360 TMC4Q7Z404 712 aa7.95□□□□□ -1.14
PCNX4-212ENST00000556360 FAM13CQ8NE31 585 aa7.95□□□□□ -1.14
PCNX4-212ENST00000556360 JARID2Q92833 1246 aaPredicted RBP7.95□□□□□ -1.14
PCNX4-212ENST00000556360 RNF32Q9H0A6 362 aa7.95□□□□□ -1.14
PCNX4-212ENST00000556360 UPK3BL1B0FP48 263 aa7.94□□□□□ -1.14
PCNX4-212ENST00000556360 UPK3BL2E5RIL1 263 aa7.94□□□□□ -1.14
PCNX4-212ENST00000556360 NPIPB6E9PJ23 425 aa7.94□□□□□ -1.14
PCNX4-212ENST00000556360 ETV2O00321 342 aaPredicted RBP7.94□□□□□ -1.14
PCNX4-212ENST00000556360 DIEXFQ68CQ4 756 aaKnown RBP7.94□□□□□ -1.14
PCNX4-212ENST00000556360 BNC2Q6ZN30 1099 aaPredicted RBP7.94□□□□□ -1.14
PCNX4-212ENST00000556360 ATG14Q6ZNE5 492 aa7.94□□□□□ -1.14
PCNX4-212ENST00000556360 IRF2BP1Q8IU81 584 aa7.94□□□□□ -1.14
PCNX4-212ENST00000556360 GATAD2BQ8WXI9 593 aa7.94□□□□□ -1.14
PCNX4-212ENST00000556360 RHOVQ96L33 236 aa7.94□□□□□ -1.14
PCNX4-212ENST00000556360 KCNK12Q9HB15 430 aa7.94□□□□□ -1.14
PCNX4-212ENST00000556360 RBM47A0AV96 593 aaKnown RBP7.93□□□□□ -1.14
PCNX4-212ENST00000556360 TRHRP34981 398 aaPredicted RBP7.93□□□□□ -1.14
PCNX4-212ENST00000556360 PSMD2Q13200 908 aa7.93□□□□□ -1.14
PCNX4-212ENST00000556360 CAMK2GQ13555 558 aaPredicted RBP7.93□□□□□ -1.14
PCNX4-212ENST00000556360 TTLL10Q6ZVT0 673 aa7.93□□□□□ -1.14
PCNX4-212ENST00000556360 OXR1Q8N573 874 aa7.93□□□□□ -1.14
PCNX4-212ENST00000556360 ASPNQ9BXN1 380 aa7.93□□□□□ -1.14
PCNX4-212ENST00000556360 ZNF281Q9Y2X9 895 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms