RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 HRASLS5Q96KN8 279 aa5.83□□□□□ -1.48
ATXN3-240ENST00000556339 CSRNP1Q96S65 589 aa5.83□□□□□ -1.48
ATXN3-240ENST00000556339 TMEM39AQ9NV64 488 aa5.83□□□□□ -1.48
ATXN3-240ENST00000556339 VAV3Q9UKW4 847 aa5.83□□□□□ -1.48
ATXN3-240ENST00000556339 MAST1Q9Y2H9 1570 aa5.83□□□□□ -1.48
ATXN3-240ENST00000556339 ABCC3O15438 1527 aa5.83□□□□□ -1.48
ATXN3-240ENST00000556339 ERVK-7P63135 1459 aa5.83□□□□□ -1.48
ATXN3-240ENST00000556339 DAPK1P53355 1430 aa5.82□□□□□ -1.48
ATXN3-240ENST00000556339 FGD6Q6ZV73 1430 aa5.82□□□□□ -1.48
ATXN3-240ENST00000556339 ZNF862O60290 1169 aa5.82□□□□□ -1.48
ATXN3-240ENST00000556339 FARP2O94887 1054 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-240ENST00000556339 CEACAM5P06731 702 aa5.82□□□□□ -1.48
ATXN3-240ENST00000556339 FUT4P22083 530 aa5.82□□□□□ -1.48
ATXN3-240ENST00000556339 CD96P40200 585 aa5.82□□□□□ -1.48
ATXN3-240ENST00000556339 KIF4BQ2VIQ3 1234 aa5.82□□□□□ -1.48
ATXN3-240ENST00000556339 ANGEL2Q5VTE6 544 aaKnown RBP5.82□□□□□ -1.48
ATXN3-240ENST00000556339 ATG4DQ86TL0 474 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-240ENST00000556339 KSR1Q8IVT5 923 aa5.82□□□□□ -1.48
ATXN3-240ENST00000556339 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.82□□□□□ -1.48
ATXN3-240ENST00000556339 EPS8L3Q8TE67 593 aaKnown RBP5.82□□□□□ -1.48
ATXN3-240ENST00000556339 DMRTB1Q96MA1 342 aa5.82□□□□□ -1.48
ATXN3-240ENST00000556339 C1orf115Q9H7X2 142 aa5.82□□□□□ -1.48
ATXN3-240ENST00000556339 CBX8Q9HC52 389 aa5.82□□□□□ -1.48
ATXN3-240ENST00000556339 DISC1Q9NRI5 854 aa5.82□□□□□ -1.48
ATXN3-240ENST00000556339 AKAP2Q9Y2D5 859 aa5.82□□□□□ -1.48
ATXN3-240ENST00000556339 ERBINQ96RT1 1412 aa5.82□□□□□ -1.48
ATXN3-240ENST00000556339 TMEM265A0A087WTH1 108 aa5.81□□□□□ -1.48
ATXN3-240ENST00000556339 LEFTY1O75610 366 aa5.81□□□□□ -1.48
ATXN3-240ENST00000556339 RNASE1P07998 156 aaKnown RBP5.81□□□□□ -1.48
ATXN3-240ENST00000556339 ZNF124Q15973 351 aa5.81□□□□□ -1.48
ATXN3-240ENST00000556339 ZNF326Q5BKZ1 582 aaKnown RBP5.81□□□□□ -1.48
ATXN3-240ENST00000556339 MAP1SQ66K74 1059 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-240ENST00000556339 SULF2Q8IWU5 870 aa5.81□□□□□ -1.48
ATXN3-240ENST00000556339 TOP6BLQ8N6T0 577 aa5.81□□□□□ -1.48
ATXN3-240ENST00000556339 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.81□□□□□ -1.48
ATXN3-240ENST00000556339 SLC38A3Q99624 504 aa5.81□□□□□ -1.48
ATXN3-240ENST00000556339 DUSP23Q9BVJ7 150 aa5.81□□□□□ -1.48
ATXN3-240ENST00000556339 MED14O60244 1454 aa5.81□□□□□ -1.48
ATXN3-240ENST00000556339 SCAF11Q99590 1463 aaKnown RBP5.81□□□□□ -1.48
ATXN3-240ENST00000556339 IQGAP1P46940 1657 aa5.81□□□□□ -1.48
ATXN3-240ENST00000556339 ARHGAP31Q2M1Z3 1444 aa5.81□□□□□ -1.48
ATXN3-240ENST00000556339 RNF17Q9BXT8 1623 aaKnown RBP5.81□□□□□ -1.48
ATXN3-240ENST00000556339 EIF2AK4Q9P2K8 1649 aaKnown RBP5.81□□□□□ -1.48
ATXN3-240ENST00000556339 TMEM2Q9UHN6 1383 aa5.8□□□□□ -1.48
ATXN3-240ENST00000556339 ZC3H13Q5T200 1668 aaKnown RBP5.8□□□□□ -1.48
ATXN3-240ENST00000556339 ISL2Q96A47 359 aa5.8□□□□□ -1.48
ATXN3-240ENST00000556339 DEPDC5O75140 1603 aa5.8□□□□□ -1.48
ATXN3-240ENST00000556339 ANKRD50Q9ULJ7 1429 aa5.8□□□□□ -1.48
ATXN3-240ENST00000556339 NEURL4Q96JN8 1562 aa5.8□□□□□ -1.48
ATXN3-240ENST00000556339 XRCC5P13010 732 aaKnown RBP5.79□□□□□ -1.48
ATXN3-240ENST00000556339 ATF3P18847 181 aa5.79□□□□□ -1.48
ATXN3-240ENST00000556339 ECM1Q16610 540 aa5.79□□□□□ -1.48
ATXN3-240ENST00000556339 MEX3CQ5U5Q3 659 aaKnown RBP5.79□□□□□ -1.48
ATXN3-240ENST00000556339 WFDC3Q8IUB2 231 aa5.79□□□□□ -1.48
ATXN3-240ENST00000556339 LRRN4CLQ8ND94 238 aa5.79□□□□□ -1.48
ATXN3-240ENST00000556339 GLIS3Q8NEA6 775 aa5.79□□□□□ -1.48
ATXN3-240ENST00000556339 CCER1Q8TC90 406 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-240ENST00000556339 EMILIN2Q9BXX0 1053 aa5.79□□□□□ -1.48
ATXN3-240ENST00000556339 MKNK2Q9HBH9 465 aa5.79□□□□□ -1.48
ATXN3-240ENST00000556339 MBNL3Q9NUK0 354 aaKnown RBP5.79□□□□□ -1.48
ATXN3-240ENST00000556339 BIN2Q9UBW5 565 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-240ENST00000556339 GTF2IRD1Q9UHL9 959 aa5.79□□□□□ -1.48
ATXN3-240ENST00000556339 VWDEQ8N2E2 1590 aa5.79□□□□□ -1.48
ATXN3-240ENST00000556339 NUP155O75694 1391 aa5.79□□□□□ -1.48
ATXN3-240ENST00000556339 TMEM94Q12767 1356 aa5.79□□□□□ -1.48
ATXN3-240ENST00000556339 LRRC7Q96NW7 1537 aa5.79□□□□□ -1.48
ATXN3-240ENST00000556339 ARNTP27540 789 aa5.78□□□□□ -1.48
ATXN3-240ENST00000556339 OXCT1P55809 520 aa5.78□□□□□ -1.48
ATXN3-240ENST00000556339 IKZF1Q13422 519 aa5.78□□□□□ -1.48
ATXN3-240ENST00000556339 UBR1Q8IWV7 1749 aa5.78□□□□□ -1.48
ATXN3-240ENST00000556339 RNF214Q8ND24 703 aa5.78□□□□□ -1.48
ATXN3-240ENST00000556339 TMEM40Q8WWA1 233 aa5.78□□□□□ -1.48
ATXN3-240ENST00000556339 BCO2Q9BYV7 579 aa5.78□□□□□ -1.48
ATXN3-240ENST00000556339 ADAMTS6Q9UKP5 1117 aa5.78□□□□□ -1.48
ATXN3-240ENST00000556339 TBX22Q9Y458 520 aa5.78□□□□□ -1.48
ATXN3-240ENST00000556339 PCDHGC5Q9Y5F6 944 aa5.78□□□□□ -1.48
ATXN3-240ENST00000556339 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-240ENST00000556339 MSH6P52701 1360 aa5.78□□□□□ -1.48
ATXN3-240ENST00000556339 RIMS2Q9UQ26 1411 aa5.77□□□□□ -1.49
ATXN3-240ENST00000556339 GNAT3A8MTJ3 354 aa5.77□□□□□ -1.49
ATXN3-240ENST00000556339 NEFMP07197 916 aa5.77□□□□□ -1.49
ATXN3-240ENST00000556339 NME2P22392 152 aa5.77□□□□□ -1.49
ATXN3-240ENST00000556339 ERVK-24P63145 666 aa5.77□□□□□ -1.49
ATXN3-240ENST00000556339 LCE1DQ5T752 114 aa5.77□□□□□ -1.49
ATXN3-240ENST00000556339 PI16Q6UXB8 463 aa5.77□□□□□ -1.49
ATXN3-240ENST00000556339 PDZD3Q86UT5 571 aa5.77□□□□□ -1.49
ATXN3-240ENST00000556339 GPBAR1Q8TDU6 330 aa5.77□□□□□ -1.49
ATXN3-240ENST00000556339 ASB11Q8WXH4 323 aa5.77□□□□□ -1.49
ATXN3-240ENST00000556339 ALKBH8Q96BT7 664 aaKnown RBP5.77□□□□□ -1.49
ATXN3-240ENST00000556339 SAMM50Q9Y512 469 aa5.77□□□□□ -1.49
ATXN3-240ENST00000556339 CSADQ9Y600 493 aa5.77□□□□□ -1.49
ATXN3-240ENST00000556339 U3KQE9 123 aa5.77□□□□□ -1.49
ATXN3-240ENST00000556339 EFCAB6Q5THR3 1501 aa5.77□□□□□ -1.49
ATXN3-240ENST00000556339 PIK3C2BO00750 1634 aa5.77□□□□□ -1.49
ATXN3-240ENST00000556339 MROH1Q8NDA8 1641 aa5.77□□□□□ -1.49
ATXN3-240ENST00000556339 CROCC2H7BZ55 1655 aa5.76□□□□□ -1.49
ATXN3-240ENST00000556339 STRCP1A6NGW2 1772 aa5.76□□□□□ -1.49
ATXN3-240ENST00000556339 SLIT1O75093 1534 aa5.76□□□□□ -1.49
ATXN3-240ENST00000556339 LRRC10BA6NIK2 292 aa5.76□□□□□ -1.49
ATXN3-240ENST00000556339 DBX1A6NMT0 343 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms