RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 ANKRD33BA6NCL7 494 aa6.17□□□□□ -1.42
ATXN3-237ENST00000556274 SPDYE3A6NKU9 549 aa6.17□□□□□ -1.42
ATXN3-237ENST00000556274 FAM177BA6PVY3 158 aa6.17□□□□□ -1.42
ATXN3-237ENST00000556274 PDE2AO00408 941 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-237ENST00000556274 NEFMP07197 916 aa6.17□□□□□ -1.42
ATXN3-237ENST00000556274 U2AF1L5P0DN76 240 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-237ENST00000556274 U2AF1Q01081 240 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN3-237ENST00000556274 C1orf141Q5JVX7 400 aa6.17□□□□□ -1.42
ATXN3-237ENST00000556274 TMCO4Q5TGY1 634 aa6.17□□□□□ -1.42
ATXN3-237ENST00000556274 MSL1Q68DK7 614 aa6.17□□□□□ -1.42
ATXN3-237ENST00000556274 ZNF530Q6P9A1 599 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-237ENST00000556274 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
ATXN3-237ENST00000556274 IL22RA1Q8N6P7 574 aa6.17□□□□□ -1.42
ATXN3-237ENST00000556274 CCDC74AQ96AQ1 378 aa6.17□□□□□ -1.42
ATXN3-237ENST00000556274 POP1Q99575 1024 aaKnown RBP6.17□□□□□ -1.42
ATXN3-237ENST00000556274 ZKSCAN3Q9BRR0 538 aa6.17□□□□□ -1.42
ATXN3-237ENST00000556274 NOP53Q9NZM5 478 aaKnown RBP6.17□□□□□ -1.42
ATXN3-237ENST00000556274 KIF24Q5T7B8 1368 aa6.17□□□□□ -1.42
ATXN3-237ENST00000556274 SCN11AQ9UI33 1791 aa6.16□□□□□ -1.42
ATXN3-237ENST00000556274 PNMA6FA0A0J9YX94 578 aa6.16□□□□□ -1.42
ATXN3-237ENST00000556274 A0A1W2PP55 124 aa6.16□□□□□ -1.42
ATXN3-237ENST00000556274 NFKBIEO00221 500 aa6.16□□□□□ -1.42
ATXN3-237ENST00000556274 IL13P35225 146 aa6.16□□□□□ -1.42
ATXN3-237ENST00000556274 TRIM28Q13263 835 aaKnown RBP6.16□□□□□ -1.42
ATXN3-237ENST00000556274 PEAR1Q5VY43 1037 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-237ENST00000556274 IFNL2Q8IZJ0 200 aa6.16□□□□□ -1.42
ATXN3-237ENST00000556274 NXPE3Q969Y0 559 aa6.16□□□□□ -1.42
ATXN3-237ENST00000556274 HHIPQ96QV1 700 aa6.16□□□□□ -1.42
ATXN3-237ENST00000556274 PCDH11XQ9BZA7 1347 aa6.16□□□□□ -1.42
ATXN3-237ENST00000556274 PCDH11YQ9BZA8 1340 aa6.16□□□□□ -1.42
ATXN3-237ENST00000556274 MEGF6O75095 1541 aa6.15□□□□□ -1.42
ATXN3-237ENST00000556274 NHSQ6T4R5 1651 aa6.15□□□□□ -1.42
ATXN3-237ENST00000556274 GADD45BO75293 160 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-237ENST00000556274 PTPRAP18433 802 aa6.15□□□□□ -1.42
ATXN3-237ENST00000556274 CDC27P30260 824 aa6.15□□□□□ -1.42
ATXN3-237ENST00000556274 CABP4P57796 275 aa6.15□□□□□ -1.42
ATXN3-237ENST00000556274 R3HDM1Q15032 1099 aaKnown RBP6.15□□□□□ -1.42
ATXN3-237ENST00000556274 RALBP1Q15311 655 aa6.15□□□□□ -1.42
ATXN3-237ENST00000556274 ENOX2Q16206 610 aaKnown RBP6.15□□□□□ -1.42
ATXN3-237ENST00000556274 AMOTQ4VCS5 1084 aa6.15□□□□□ -1.42
ATXN3-237ENST00000556274 PRRT3Q5FWE3 981 aa6.15□□□□□ -1.42
ATXN3-237ENST00000556274 CACTIN-AS1Q8N1I8 211 aa6.15□□□□□ -1.42
ATXN3-237ENST00000556274 TMEM102Q8N9M5 508 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-237ENST00000556274 EPS8L3Q8TE67 593 aaKnown RBP6.15□□□□□ -1.42
ATXN3-237ENST00000556274 NPHS2Q9NP85 383 aa6.15□□□□□ -1.42
ATXN3-237ENST00000556274 PKD1L3Q7Z443 1732 aa6.15□□□□□ -1.42
ATXN3-237ENST00000556274 TAF1LQ8IZX4 1826 aa6.15□□□□□ -1.43
ATXN3-237ENST00000556274 DISP2A7MBM2 1401 aa6.15□□□□□ -1.43
ATXN3-237ENST00000556274 TNS2Q63HR2 1409 aa6.15□□□□□ -1.43
ATXN3-237ENST00000556274 FAM229AH3BQW9 127 aa6.14□□□□□ -1.43
ATXN3-237ENST00000556274 CYP27B1O15528 508 aa6.14□□□□□ -1.43
ATXN3-237ENST00000556274 ANP32CO43423 234 aa6.14□□□□□ -1.43
ATXN3-237ENST00000556274 P4HBP07237 508 aaKnown RBP6.14□□□□□ -1.43
ATXN3-237ENST00000556274 COL8A1P27658 744 aa6.14□□□□□ -1.43
ATXN3-237ENST00000556274 CDC25BP30305 580 aa6.14□□□□□ -1.43
ATXN3-237ENST00000556274 RAC1P63000 192 aa6.14□□□□□ -1.43
ATXN3-237ENST00000556274 ATP2B2Q01814 1243 aa6.14□□□□□ -1.43
ATXN3-237ENST00000556274 FMR1Q06787 632 aaKnown RBP eCLIP6.14□□□□□ -1.43
ATXN3-237ENST00000556274 TXNRD1Q16881 649 aa6.14□□□□□ -1.43
ATXN3-237ENST00000556274 DNAJC14Q6Y2X3 702 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-237ENST00000556274 ASAP3Q8TDY4 903 aa6.14□□□□□ -1.43
ATXN3-237ENST00000556274 CAMKK2Q96RR4 588 aa6.14□□□□□ -1.43
ATXN3-237ENST00000556274 EHD4Q9H223 541 aa6.14□□□□□ -1.43
ATXN3-237ENST00000556274 LIN7BQ9HAP6 207 aa6.14□□□□□ -1.43
ATXN3-237ENST00000556274 SH2B1Q9NRF2 756 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-237ENST00000556274 TMOD3Q9NYL9 352 aa6.14□□□□□ -1.43
ATXN3-237ENST00000556274 PPME1Q9Y570 386 aa6.14□□□□□ -1.43
ATXN3-237ENST00000556274 NUP188Q5SRE5 1749 aa6.13□□□□□ -1.43
ATXN3-237ENST00000556274 A0A0A0MRY4 1105 aa6.13□□□□□ -1.43
ATXN3-237ENST00000556274 PLSCR1O15162 318 aa6.13□□□□□ -1.43
ATXN3-237ENST00000556274 HSP90AB1P08238 724 aaKnown RBP6.13□□□□□ -1.43
ATXN3-237ENST00000556274 PHKG2P15735 406 aa6.13□□□□□ -1.43
ATXN3-237ENST00000556274 PRKAR2BP31323 418 aa6.13□□□□□ -1.43
ATXN3-237ENST00000556274 WDR43Q15061 677 aaKnown RBP eCLIP6.13□□□□□ -1.43
ATXN3-237ENST00000556274 KIAA0319Q5VV43 1072 aa6.13□□□□□ -1.43
ATXN3-237ENST00000556274 ADAMTSL4Q6UY14 1074 aa6.13□□□□□ -1.43
ATXN3-237ENST00000556274 SETDB2Q96T68 719 aa6.13□□□□□ -1.43
ATXN3-237ENST00000556274 ADAM19Q9H013 955 aa6.13□□□□□ -1.43
ATXN3-237ENST00000556274 MUC3BQ9H195 1237 aa6.13□□□□□ -1.43
ATXN3-237ENST00000556274 LGR6Q9HBX8 967 aa6.13□□□□□ -1.43
ATXN3-237ENST00000556274 STK32BQ9NY57 414 aa6.13□□□□□ -1.43
ATXN3-237ENST00000556274 WWC3Q9ULE0 1092 aa6.13□□□□□ -1.43
ATXN3-237ENST00000556274 IGSF1Q8N6C5 1336 aa6.13□□□□□ -1.43
ATXN3-237ENST00000556274 NPC1L1Q9UHC9 1359 aa6.13□□□□□ -1.43
ATXN3-237ENST00000556274 LY75O60449 1722 aa6.13□□□□□ -1.43
ATXN3-237ENST00000556274 LINC01387J3KSC0 135 aa6.12□□□□□ -1.43
ATXN3-237ENST00000556274 LDHBP07195 334 aaKnown RBP6.12□□□□□ -1.43
ATXN3-237ENST00000556274 MTHFSDQ2M296 383 aaKnown RBP6.12□□□□□ -1.43
ATXN3-237ENST00000556274 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.12□□□□□ -1.43
ATXN3-237ENST00000556274 EAPPQ56P03 285 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-237ENST00000556274 ALG1LQ6GMV1 187 aa6.12□□□□□ -1.43
ATXN3-237ENST00000556274 TXNDC11Q6PKC3 985 aa6.12□□□□□ -1.43
ATXN3-237ENST00000556274 PI16Q6UXB8 463 aa6.12□□□□□ -1.43
ATXN3-237ENST00000556274 CCDC146Q8IYE0 955 aa6.12□□□□□ -1.43
ATXN3-237ENST00000556274 BSNDQ8WZ55 320 aa6.12□□□□□ -1.43
ATXN3-237ENST00000556274 PIGBQ92521 554 aa6.12□□□□□ -1.43
ATXN3-237ENST00000556274 RTF1Q92541 710 aaKnown RBP6.12□□□□□ -1.43
ATXN3-237ENST00000556274 RREB1Q92766 1687 aa6.12□□□□□ -1.43
ATXN3-237ENST00000556274 PHACTR3Q96KR7 559 aa6.12□□□□□ -1.43
ATXN3-237ENST00000556274 EP400Q96L91 3159 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms