RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 MEGF11A6BM72 1044 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 C9IYK1 514 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 RNGTTO60942 597 aaKnown RBP5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 WISP1O95388 367 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 ZNF143P52747 638 aaPredicted RBP5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 SLBPQ14493 270 aaKnown RBP eCLIP5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 TTLL4Q14679 1199 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 FAM209AQ5JX71 171 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 NUTM2GQ5VZR2 741 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 KRT26Q7Z3Y9 468 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 UBE3DQ7Z6J8 389 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 NIM1KQ8IY84 436 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 DTWD1Q8N5C7 304 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 DCAF11Q8TEB1 546 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 SLC16A10Q8TF71 515 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 STAG1Q8WVM7 1258 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 NINJ1Q92982 152 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 CDC6Q99741 560 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 ATXN3LQ9H3M9 355 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 LRP2BPQ9P2M1 347 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 DLL1O00548 723 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 TERTO14746 1132 aaKnown RBP5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 CLEC3AO75596 197 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 RAPGEF3O95398 923 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 EPHX1P07099 455 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 NEFMP07197 916 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 NAT2P11245 290 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 MYCLP1P12525 358 aaPredicted RBP5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 DRD2P14416 443 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 PABPC4Q13310 644 aaKnown RBP eCLIP5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 PLEKHG6Q3KR16 790 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 TM4SF20Q53R12 229 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 AXDND1Q5T1B0 1012 aaPredicted RBP5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 HEATR6Q6AI08 1181 aaKnown RBP5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 KIAA1211Q6ZU35 1233 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 NOL8Q76FK4 1167 aaKnown RBP5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 DYMQ7RTS9 669 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 FBXO11Q86XK2 927 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 KCT2Q8NC54 265 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 LRRN4CLQ8ND94 238 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 PPP1R14AQ96A00 147 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 MFSD3Q96ES6 412 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 EXOC2Q96KP1 924 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 FGD4Q96M96 766 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 IPO9Q96P70 1041 aaKnown RBP5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 HAUS7Q99871 368 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 DHRS4Q9BTZ2 278 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 SSU72Q9NP77 194 aaKnown RBP5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 ARHGEF4Q9NR80 690 aa5.69□□□□□ -1.5
SPTLC2-204ENST00000556264 A0A0A0MRY4 1105 aa5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 TRAV20A0A0B4J274 112 aa5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 IRS4O14654 1257 aaPredicted RBP5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 CST3P01034 146 aaPredicted RBP5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 ADH5P11766 374 aa5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 CNGA1P29973 690 aa5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 SOX4Q06945 474 aaPredicted RBP5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 HSP90AA2PQ14568 343 aaPredicted RBP5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 YOD1Q5VVQ6 348 aaPredicted RBP5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 PRAMEF13Q5VWM6 474 aa5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 DCAF15Q66K64 600 aa5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 ACAD11Q709F0 780 aa5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 ADAT2Q7Z6V5 191 aaKnown RBP5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 CCDC144CPQ8IYA2 1237 aa5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 C12orf50Q8NA57 414 aaPredicted RBP5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 SMG8Q8ND04 991 aaKnown RBP5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 XAGE3Q8WTP9 111 aa5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 CYB5D2Q8WUJ1 264 aa5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 CHAC2Q8WUX2 184 aa5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 KISS1RQ969F8 398 aaPredicted RBP5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 ISL2Q96A47 359 aa5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 ZNF512BQ96KM6 892 aaPredicted RBP5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 LGR4Q9BXB1 951 aa5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 PIDD1Q9HB75 910 aa5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 CYP4F12Q9HCS2 524 aa5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 LRRC4BQ9NT99 713 aa5.68□□□□□ -1.5
SPTLC2-204ENST00000556264 TRBV23-1A0A0A0MS06 115 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 SPDYE3A6NKU9 549 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 PLD2O14939 933 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 RFPL3O75679 317 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 ITGAVP06756 1048 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 CELA2BP08218 269 aaPredicted RBP5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 SLURP2P0DP57 97 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 CAP2P40123 477 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 ASPAP45381 313 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 RAC1P63000 192 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 PPP2R2AP63151 447 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 LYPD4Q6UWN0 246 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 THNSL2Q86YJ6 484 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 JAMLQ86YT9 394 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 SCUBE1Q8IWY4 988 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 FMR1NBQ8N0W7 255 aaPredicted RBP5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 SMARCC1Q92922 1105 aaPredicted RBP5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 IRF7Q92985 503 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 AARSD1Q9BTE6 412 aaKnown RBP5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 FOXQ1Q9C009 403 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 KLHL25Q9H0H3 589 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 RNF208Q9H0X6 261 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 IRF2BPLQ9H1B7 796 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 SUGCTQ9HAC7 445 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms