RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 PNMA1Q8ND90 353 aa21.65■■□□□ 1.06
SDR39U1-218ENST00000556262 LEO1Q8WVC0 666 aaPredicted RBP21.65■■□□□ 1.06
SDR39U1-218ENST00000556262 hCG_1642624A0A1W2PR95 340 aa21.65■■□□□ 1.06
SDR39U1-218ENST00000556262 KIF23Q02241 960 aaPredicted RBP21.65■■□□□ 1.06
SDR39U1-218ENST00000556262 ANKS1AQ92625 1134 aa21.65■■□□□ 1.06
SDR39U1-218ENST00000556262 PRMT6Q96LA8 375 aaPredicted RBP21.65■■□□□ 1.06
SDR39U1-218ENST00000556262 SCAND2PQ9GZW5 306 aaPredicted RBP21.65■■□□□ 1.06
SDR39U1-218ENST00000556262 TDRD3Q9H7E2 651 aaKnown RBP21.65■■□□□ 1.06
SDR39U1-218ENST00000556262 RBM28Q9NW13 759 aaKnown RBP21.65■■□□□ 1.06
SDR39U1-218ENST00000556262 FAM198AQ9UFP1 575 aa21.65■■□□□ 1.06
SDR39U1-218ENST00000556262 ZNRF3Q9ULT6 936 aa21.65■■□□□ 1.06
SDR39U1-218ENST00000556262 NIM1KQ8IY84 436 aa21.64■■□□□ 1.05
SDR39U1-218ENST00000556262 NEDD1Q8NHV4 660 aa21.64■■□□□ 1.05
SDR39U1-218ENST00000556262 CTCFLQ8NI51 663 aaPredicted RBP21.64■■□□□ 1.05
SDR39U1-218ENST00000556262 VPS33BQ9H267 617 aa21.64■■□□□ 1.05
SDR39U1-218ENST00000556262 SERPINB13Q9UIV8 391 aa21.64■■□□□ 1.05
SDR39U1-218ENST00000556262 BCS1LQ9Y276 419 aa21.64■■□□□ 1.05
SDR39U1-218ENST00000556262 CD2APQ9Y5K6 639 aa21.64■■□□□ 1.05
SDR39U1-218ENST00000556262 FER1L6Q2WGJ9 1857 aa21.64■■□□□ 1.05
SDR39U1-218ENST00000556262 DEXIO95424 95 aa21.63■■□□□ 1.05
SDR39U1-218ENST00000556262 ZSCAN23Q3MJ62 389 aa21.63■■□□□ 1.05
SDR39U1-218ENST00000556262 TMTC3Q6ZXV5 915 aa21.63■■□□□ 1.05
SDR39U1-218ENST00000556262 USP28Q96RU2 1077 aa21.63■■□□□ 1.05
SDR39U1-218ENST00000556262 TMEM47Q9BQJ4 181 aa21.63■■□□□ 1.05
SDR39U1-218ENST00000556262 TAOK3Q9H2K8 898 aa21.63■■□□□ 1.05
SDR39U1-218ENST00000556262 MTMR7Q9Y216 660 aa21.63■■□□□ 1.05
SDR39U1-218ENST00000556262 MYH8P13535 1937 aa21.63■■□□□ 1.05
SDR39U1-218ENST00000556262 NFKBIEO00221 500 aa21.63■■□□□ 1.05
SDR39U1-218ENST00000556262 CCDC178Q5BJE1 867 aa21.63■■□□□ 1.05
SDR39U1-218ENST00000556262 SRBD1Q8N5C6 995 aaKnown RBP21.63■■□□□ 1.05
SDR39U1-218ENST00000556262 WASF1Q92558 559 aa21.63■■□□□ 1.05
SDR39U1-218ENST00000556262 GMLQ99445 158 aa21.63■■□□□ 1.05
SDR39U1-218ENST00000556262 IDI2Q9BXS1 227 aa21.63■■□□□ 1.05
SDR39U1-218ENST00000556262 CFAP45Q9UL16 551 aa21.63■■□□□ 1.05
SDR39U1-218ENST00000556262 ELP1O95163 1332 aa21.62■■□□□ 1.05
SDR39U1-218ENST00000556262 TRIM29Q14134 588 aa21.62■■□□□ 1.05
SDR39U1-218ENST00000556262 CEP95Q96GE4 821 aa21.62■■□□□ 1.05
SDR39U1-218ENST00000556262 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.62■■□□□ 1.05
SDR39U1-218ENST00000556262 RNF26Q9BY78 433 aaPredicted RBP21.62■■□□□ 1.05
SDR39U1-218ENST00000556262 V9GY48 417 aaPredicted RBP21.62■■□□□ 1.05
SDR39U1-218ENST00000556262 MYO3BQ8WXR4 1341 aa21.62■■□□□ 1.05
SDR39U1-218ENST00000556262 DDTLA6NHG4 134 aaPredicted RBP21.61■■□□□ 1.05
SDR39U1-218ENST00000556262 HLA-DOAP06340 250 aa21.61■■□□□ 1.05
SDR39U1-218ENST00000556262 CCDC173Q0VFZ6 552 aa21.61■■□□□ 1.05
SDR39U1-218ENST00000556262 ANP32BQ92688 251 aaKnown RBP21.61■■□□□ 1.05
SDR39U1-218ENST00000556262 RRAGDQ9NQL2 400 aaPredicted RBP21.61■■□□□ 1.05
SDR39U1-218ENST00000556262 KCNJ14Q9UNX9 436 aa21.61■■□□□ 1.05
SDR39U1-218ENST00000556262 AKR1B1P15121 316 aa21.61■■□□□ 1.05
SDR39U1-218ENST00000556262 SHMT1P34896 483 aa21.61■■□□□ 1.05
SDR39U1-218ENST00000556262 AKAP17AQ02040 695 aaKnown RBP21.61■■□□□ 1.05
SDR39U1-218ENST00000556262 PKN1Q16512 942 aa21.61■■□□□ 1.05
SDR39U1-218ENST00000556262 SH3BP5LQ7L8J4 393 aa21.61■■□□□ 1.05
SDR39U1-218ENST00000556262 NLGN2Q8NFZ4 835 aa21.61■■□□□ 1.05
SDR39U1-218ENST00000556262 CXCL9Q07325 125 aa21.6■■□□□ 1.05
SDR39U1-218ENST00000556262 RASGRP2Q7LDG7 609 aa21.6■■□□□ 1.05
SDR39U1-218ENST00000556262 ZSCAN29Q8IWY8 852 aaPredicted RBP21.6■■□□□ 1.05
SDR39U1-218ENST00000556262 STAG2Q8N3U4 1231 aa21.6■■□□□ 1.05
SDR39U1-218ENST00000556262 RGS22Q8NE09 1264 aa21.6■■□□□ 1.05
SDR39U1-218ENST00000556262 ZNF396Q96N95 335 aaPredicted RBP21.6■■□□□ 1.05
SDR39U1-218ENST00000556262 CNTNAP5Q8WYK1 1306 aa21.6■■□□□ 1.05
SDR39U1-218ENST00000556262 FAM196BA6NMK8 535 aa21.59■■□□□ 1.05
SDR39U1-218ENST00000556262 PRPF3O43395 683 aaKnown RBP21.59■■□□□ 1.05
SDR39U1-218ENST00000556262 NASPP49321 788 aaPredicted RBP21.59■■□□□ 1.05
SDR39U1-218ENST00000556262 BRAPQ7Z569 592 aa21.59■■□□□ 1.05
SDR39U1-218ENST00000556262 PIBF1Q8WXW3 757 aa21.59■■□□□ 1.05
SDR39U1-218ENST00000556262 SHISA4Q96DD7 197 aa21.59■■□□□ 1.05
SDR39U1-218ENST00000556262 PGBD1Q96JS3 809 aa21.59■■□□□ 1.05
SDR39U1-218ENST00000556262 DNAJC18Q9H819 358 aa21.59■■□□□ 1.05
SDR39U1-218ENST00000556262 SWAP70Q9UH65 585 aa21.59■■□□□ 1.05
SDR39U1-218ENST00000556262 SIPA1L1O43166 1804 aa21.59■■□□□ 1.05
SDR39U1-218ENST00000556262 MYSM1Q5VVJ2 828 aa21.59■■□□□ 1.05
SDR39U1-218ENST00000556262 CLEC10AQ8IUN9 316 aa21.59■■□□□ 1.05
SDR39U1-218ENST00000556262 SPDYE2BA6NHP3 402 aa21.58■■□□□ 1.05
SDR39U1-218ENST00000556262 SPDYE6P0CI01 402 aa21.58■■□□□ 1.05
SDR39U1-218ENST00000556262 KIF5BP33176 963 aa21.58■■□□□ 1.05
SDR39U1-218ENST00000556262 GNL2Q13823 731 aaKnown RBP21.58■■□□□ 1.05
SDR39U1-218ENST00000556262 OGFOD1Q8N543 542 aa21.58■■□□□ 1.05
SDR39U1-218ENST00000556262 PPP1R9BQ96SB3 815 aa21.58■■□□□ 1.05
SDR39U1-218ENST00000556262 VPS54Q9P1Q0 977 aa21.58■■□□□ 1.05
SDR39U1-218ENST00000556262 MAD2L2Q9UI95 211 aa21.58■■□□□ 1.05
SDR39U1-218ENST00000556262 MMP1P03956 469 aa21.57■■□□□ 1.04
SDR39U1-218ENST00000556262 GRM4Q14833 912 aa21.57■■□□□ 1.04
SDR39U1-218ENST00000556262 ATL3Q6DD88 541 aa21.57■■□□□ 1.04
SDR39U1-218ENST00000556262 JDP2Q8WYK2 163 aa21.57■■□□□ 1.04
SDR39U1-218ENST00000556262 SYAP1Q96A49 352 aaPredicted RBP21.57■■□□□ 1.04
SDR39U1-218ENST00000556262 EHD4Q9H223 541 aa21.57■■□□□ 1.04
SDR39U1-218ENST00000556262 DHX36Q9H2U1 1008 aaKnown RBP21.57■■□□□ 1.04
SDR39U1-218ENST00000556262 RCOR1Q9UKL0 485 aa21.57■■□□□ 1.04
SDR39U1-218ENST00000556262 HDAC9Q9UKV0 1011 aa21.57■■□□□ 1.04
SDR39U1-218ENST00000556262 CLRN2A0PK11 232 aa21.57■■□□□ 1.04
SDR39U1-218ENST00000556262 U2AF2P26368 475 aaKnown RBP eCLIP21.57■■□□□ 1.048e-10■■■□□ 14.8
SDR39U1-218ENST00000556262 EIF6P56537 245 aaKnown RBP21.57■■□□□ 1.04
SDR39U1-218ENST00000556262 RASSF7Q02833 373 aa21.57■■□□□ 1.04
SDR39U1-218ENST00000556262 TRIM44Q96DX7 344 aaPredicted RBP21.57■■□□□ 1.04
SDR39U1-218ENST00000556262 MAP3K14Q99558 947 aa21.57■■□□□ 1.04
SDR39U1-218ENST00000556262 MTMR4Q9NYA4 1195 aa21.57■■□□□ 1.04
SDR39U1-218ENST00000556262 CLIC4Q9Y696 253 aa21.57■■□□□ 1.04
SDR39U1-218ENST00000556262 PLIN4Q96Q06 1357 aa21.56■■□□□ 1.04
SDR39U1-218ENST00000556262 SYCE3A1L190 88 aa21.56■■□□□ 1.04
SDR39U1-218ENST00000556262 GOLGA6L4A6NEF3 574 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms